Protein–RNA interactions for Protein: P08670

VIM, Vimentin, humanhuman

Known RBP Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VIMP08670 Y_RNA.543-201ENST00000384649 107 ntBASIC-1.33□□□□□ -2.62
VIMP08670 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC-1.33□□□□□ -2.62
VIMP08670 RNU2-51P-201ENST00000410708 197 ntBASIC-1.33□□□□□ -2.62
VIMP08670 Y_RNA.616-201ENST00000410835 95 ntBASIC-1.33□□□□□ -2.62
VIMP08670 RNU6-983P-201ENST00000516004 103 ntBASIC-1.33□□□□□ -2.62
VIMP08670 RNU6-732P-201ENST00000516033 103 ntBASIC-1.33□□□□□ -2.62
VIMP08670 RNU6-313P-201ENST00000516317 112 ntBASIC-1.33□□□□□ -2.62
VIMP08670 MIR4490-201ENST00000582647 84 ntBASIC-1.33□□□□□ -2.62
VIMP08670 FAS-AS1.1-201ENST00000615327 126 ntBASIC-1.33□□□□□ -2.62
VIMP08670 MIR450A1-201ENST00000362262 91 ntBASIC-1.34□□□□□ -2.62
VIMP08670 RNU7-88P-201ENST00000458752 63 ntBASIC-1.34□□□□□ -2.62
VIMP08670 MIR548AG1-201ENST00000579932 66 ntBASIC-1.34□□□□□ -2.62
VIMP08670 RNA5SP26-201ENST00000362406 119 ntBASIC-1.35□□□□□ -2.63
VIMP08670 SNORD115-37-201ENST00000363768 82 ntBASIC-1.35□□□□□ -2.63
VIMP08670 RNA5SP331-201ENST00000364986 107 ntBASIC-1.35□□□□□ -2.63
VIMP08670 RNU6-633P-201ENST00000362612 103 ntBASIC-1.36□□□□□ -2.63
VIMP08670 RNU6-164P-201ENST00000364604 103 ntBASIC-1.36□□□□□ -2.63
VIMP08670 MIR1468-201ENST00000410600 86 ntBASIC-1.36□□□□□ -2.63
VIMP08670 AL035461.1-201ENST00000421490 332 ntBASIC-1.36□□□□□ -2.63
VIMP08670 MIR4668-201ENST00000582284 70 ntBASIC-1.36□□□□□ -2.63
VIMP08670 SNORD18.1-201ENST00000363807 70 ntBASIC-1.37□□□□□ -2.63
VIMP08670 Y_RNA.413-201ENST00000384007 102 ntBASIC-1.37□□□□□ -2.63
VIMP08670 RNA5SP86-201ENST00000390869 98 ntBASIC-1.37□□□□□ -2.63
VIMP08670 Y_RNA.754-201ENST00000476024 102 ntBASIC-1.37□□□□□ -2.63
VIMP08670 RNU6-1108P-201ENST00000516308 104 ntBASIC-1.37□□□□□ -2.63
VIMP08670 Y_RNA.790-201ENST00000614282 102 ntBASIC-1.37□□□□□ -2.63
VIMP08670 Y_RNA.782-201ENST00000614695 102 ntBASIC-1.37□□□□□ -2.63
VIMP08670 MIR5683-201ENST00000636514 76 ntBASIC-1.37□□□□□ -2.63
VIMP08670 Y_RNA.264-201ENST00000364665 102 ntBASIC-1.38□□□□□ -2.63
VIMP08670 Y_RNA.426-201ENST00000384068 113 ntBASIC-1.38□□□□□ -2.63
VIMP08670 Y_RNA.55-201ENST00000362797 102 ntBASIC-1.39□□□□□ -2.63
VIMP08670 MIR548C-201ENST00000384815 97 ntBASIC-1.39□□□□□ -2.63
VIMP08670 MIR548H1-201ENST00000408610 102 ntBASIC-1.39□□□□□ -2.63
VIMP08670 RNU6-656P-201ENST00000516785 107 ntBASIC-1.39□□□□□ -2.63
VIMP08670 U7.5-201ENST00000517224 61 ntBASIC-1.39□□□□□ -2.63
VIMP08670 MIR3910-1-201ENST00000580936 111 ntBASIC-1.39□□□□□ -2.63
VIMP08670 U4.2-201ENST00000618561 85 ntBASIC-1.39□□□□□ -2.63
VIMP08670 AC091912.2-201ENST00000624798 167 ntBASIC-1.39□□□□□ -2.63
VIMP08670 Y_RNA.273-201ENST00000364703 102 ntBASIC-1.41□□□□□ -2.64
VIMP08670 RNY4P18-201ENST00000391107 89 ntBASIC-1.41□□□□□ -2.64
VIMP08670 RNU6-807P-201ENST00000516805 107 ntBASIC-1.41□□□□□ -2.64
VIMP08670 AP001318.4-201ENST00000616637 121 ntBASIC-1.41□□□□□ -2.64
VIMP08670 RNU6-246P-201ENST00000384702 107 ntBASIC-1.42□□□□□ -2.64
VIMP08670 SNORD19-201ENST00000391191 68 ntBASIC-1.42□□□□□ -2.64
VIMP08670 Y_RNA.620-201ENST00000411009 88 ntBASIC-1.42□□□□□ -2.64
VIMP08670 AC093729.1-201ENST00000513074 128 ntBASIC-1.42□□□□□ -2.64
VIMP08670 AP002795.1-201ENST00000534879 84 ntBASIC-1.42□□□□□ -2.64
VIMP08670 U2.7-201ENST00000619197 100 ntBASIC-1.42□□□□□ -2.64
VIMP08670 MIR6874-201ENST00000635894 71 ntBASIC-1.42□□□□□ -2.64
VIMP08670 SNORD114-3-201ENST00000364969 75 ntBASIC-1.43□□□□□ -2.64
VIMP08670 Y_RNA.375-201ENST00000365625 101 ntBASIC-1.43□□□□□ -2.64
VIMP08670 MIR548Q-201ENST00000408404 100 ntBASIC-1.43□□□□□ -2.64
VIMP08670 SNORA40.13-201ENST00000516379 120 ntBASIC-1.43□□□□□ -2.64
VIMP08670 SNORD116-22-201ENST00000384430 92 ntBASIC-1.44□□□□□ -2.64
VIMP08670 RPL35AP4-201ENST00000412007 102 ntBASIC-1.44□□□□□ -2.64
VIMP08670 RNU6-1174P-201ENST00000517278 101 ntBASIC-1.44□□□□□ -2.64
VIMP08670 MALAT1.1-201ENST00000618249 95 ntBASIC-1.44□□□□□ -2.64
VIMP08670 RNU6-624P-201ENST00000363411 107 ntBASIC-1.45□□□□□ -2.64
VIMP08670 Y_RNA.223-201ENST00000364290 113 ntBASIC-1.45□□□□□ -2.64
VIMP08670 RNU6-645P-201ENST00000364649 106 ntBASIC-1.45□□□□□ -2.64
VIMP08670 RNU6-1325P-201ENST00000364905 105 ntBASIC-1.45□□□□□ -2.64
VIMP08670 RNY4P27-201ENST00000363341 96 ntBASIC-1.46□□□□□ -2.64
VIMP08670 Y_RNA.225-201ENST00000364326 97 ntBASIC-1.46□□□□□ -2.64
VIMP08670 AC090616.4-201ENST00000448026 115 ntBASIC-1.46□□□□□ -2.64
VIMP08670 AL627230.5-201ENST00000619807 58 ntBASIC-1.46□□□□□ -2.64
VIMP08670 RNU6-228P-201ENST00000362700 106 ntBASIC-1.47□□□□□ -2.64
VIMP08670 RNU6-168P-201ENST00000516189 101 ntBASIC-1.47□□□□□ -2.64
VIMP08670 RNU6-330P-201ENST00000363015 107 ntBASIC-1.48□□□□□ -2.65
VIMP08670 Y_RNA.236-201ENST00000364427 111 ntBASIC-1.48□□□□□ -2.65
VIMP08670 RNU6-219P-201ENST00000364728 107 ntBASIC-1.48□□□□□ -2.65
VIMP08670 MIR487B-201ENST00000385021 84 ntBASIC-1.48□□□□□ -2.65
VIMP08670 RNU6-402P-201ENST00000410678 103 ntBASIC-1.48□□□□□ -2.65
VIMP08670 AC018880.2-201ENST00000414265 201 ntBASIC-1.48□□□□□ -2.65
VIMP08670 MIR429-201ENST00000362106 83 ntBASIC-1.49□□□□□ -2.65
VIMP08670 RNU6-478P-201ENST00000363904 110 ntBASIC-1.5□□□□□ -2.65
VIMP08670 Y_RNA.678-201ENST00000516408 96 ntBASIC-1.5□□□□□ -2.65
VIMP08670 RNU6-267P-201ENST00000516714 103 ntBASIC-1.5□□□□□ -2.65
VIMP08670 SNORD113-1-201ENST00000365321 69 ntBASIC-1.51□□□□□ -2.65
VIMP08670 RNU6-458P-201ENST00000384179 107 ntBASIC-1.51□□□□□ -2.65
VIMP08670 RNU6-696P-201ENST00000390834 107 ntBASIC-1.51□□□□□ -2.65
VIMP08670 RNU6-400P-201ENST00000391173 106 ntBASIC-1.51□□□□□ -2.65
VIMP08670 Y_RNA.603-201ENST00000410571 108 ntBASIC-1.51□□□□□ -2.65
VIMP08670 AC108019.1-201ENST00000512540 175 ntBASIC-1.51□□□□□ -2.65
VIMP08670 U6.58-201ENST00000613107 107 ntBASIC-1.51□□□□□ -2.65
VIMP08670 RNU6-755P-201ENST00000364400 103 ntBASIC-1.52□□□□□ -2.65
VIMP08670 Y_RNA.340-201ENST00000365330 92 ntBASIC-1.52□□□□□ -2.65
VIMP08670 RNU6ATAC32P-201ENST00000516026 76 ntBASIC-1.52□□□□□ -2.65
VIMP08670 MIR548BB-201ENST00000626714 66 ntBASIC-1.52□□□□□ -2.65
VIMP08670 RNU6-497P-201ENST00000365316 104 ntBASIC-1.53□□□□□ -2.65
VIMP08670 SNORA8.1-201ENST00000384250 140 ntBASIC-1.53□□□□□ -2.65
VIMP08670 Y_RNA.502-201ENST00000384478 113 ntBASIC-1.53□□□□□ -2.65
VIMP08670 RNU6-604P-201ENST00000390917 100 ntBASIC-1.53□□□□□ -2.65
VIMP08670 RNU6-557P-201ENST00000516842 110 ntBASIC-1.53□□□□□ -2.65
VIMP08670 Y_RNA.74-201ENST00000362911 99 ntBASIC-1.54□□□□□ -2.66
VIMP08670 Y_RNA.629-201ENST00000411368 105 ntBASIC-1.54□□□□□ -2.66
VIMP08670 RNU6-982P-201ENST00000516216 102 ntBASIC-1.54□□□□□ -2.66
VIMP08670 RNU6-1247P-201ENST00000516622 98 ntBASIC-1.54□□□□□ -2.66
VIMP08670 RNU6-118P-201ENST00000516552 102 ntBASIC-1.55□□□□□ -2.66
VIMP08670 RNU6-303P-201ENST00000517091 106 ntBASIC-1.55□□□□□ -2.66
VIMP08670 MIR4756-201ENST00000577874 78 ntBASIC-1.55□□□□□ -2.66
Retrieved 100 of 98,524 protein–RNA pairs in 56.5 ms