Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 SNORA40.14-201ENST00000516543 86 ntBASIC-2.77□□□□□ -2.85
APOBP04114 AL162413.1-201ENST00000603198 110 ntBASIC-2.77□□□□□ -2.85
APOBP04114 Y_RNA.485-201ENST00000384395 102 ntBASIC-2.78□□□□□ -2.85
APOBP04114 MIR4509-3-201ENST00000578671 94 ntBASIC-2.78□□□□□ -2.85
APOBP04114 MIR4509-2-201ENST00000583920 94 ntBASIC-2.78□□□□□ -2.85
APOBP04114 MIR4509-1-201ENST00000618224 94 ntBASIC-2.78□□□□□ -2.85
APOBP04114 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC-2.78□□□□□ -2.85
APOBP04114 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-2.78□□□□□ -2.85
APOBP04114 RNU6-835P-201ENST00000516974 104 ntBASIC-2.78□□□□□ -2.85
APOBP04114 RNU6-1143P-201ENST00000516125 104 ntBASIC-2.78□□□□□ -2.86
APOBP04114 AC040904.1-201ENST00000590850 223 ntBASIC-2.78□□□□□ -2.86
APOBP04114 SNORD116-6-201ENST00000384711 96 ntBASIC-2.79□□□□□ -2.86
APOBP04114 MIR559-201ENST00000385188 96 ntBASIC-2.79□□□□□ -2.86
APOBP04114 AC104985.2-201ENST00000620598 500 ntBASIC-2.79□□□□□ -2.86
APOBP04114 RNU5A-2P-201ENST00000384337 116 ntBASIC-2.79□□□□□ -2.86
APOBP04114 MIR1263-201ENST00000408324 86 ntBASIC-2.79□□□□□ -2.86
APOBP04114 RNU6-1326P-201ENST00000391262 107 ntBASIC-2.79□□□□□ -2.86
APOBP04114 RNU6-450P-201ENST00000364654 107 ntBASIC-2.8□□□□□ -2.86
APOBP04114 SNORA8.1-201ENST00000384250 140 ntBASIC-2.8□□□□□ -2.86
APOBP04114 RNU6-196P-201ENST00000384315 107 ntBASIC-2.8□□□□□ -2.86
APOBP04114 SNORD116.3-201ENST00000517176 78 ntBASIC-2.8□□□□□ -2.86
APOBP04114 MIR1297-201ENST00000637311 77 ntBASIC-2.8□□□□□ -2.86
APOBP04114 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC-2.81□□□□□ -2.86
APOBP04114 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC-2.81□□□□□ -2.86
APOBP04114 Y_RNA.609-201ENST00000410669 89 ntBASIC-2.81□□□□□ -2.86
APOBP04114 SNORA40.16-201ENST00000517238 121 ntBASIC-2.81□□□□□ -2.86
APOBP04114 MIR3613-201ENST00000579844 87 ntBASIC-2.81□□□□□ -2.86
APOBP04114 AC139792.2-201ENST00000624218 587 ntBASIC-2.81□□□□□ -2.86
APOBP04114 Y_RNA.154-201ENST00000363624 102 ntBASIC-2.81□□□□□ -2.86
APOBP04114 SNORD113.1-201ENST00000363280 73 ntBASIC-2.81□□□□□ -2.86
APOBP04114 RNU6-1188P-201ENST00000363795 107 ntBASIC-2.81□□□□□ -2.86
APOBP04114 Y_RNA.563-201ENST00000384707 108 ntBASIC-2.81□□□□□ -2.86
APOBP04114 RNU6-130P-201ENST00000411112 103 ntBASIC-2.81□□□□□ -2.86
APOBP04114 SNORD37.2-201ENST00000391075 66 ntBASIC-2.82□□□□□ -2.86
APOBP04114 RNU6-542P-201ENST00000516405 103 ntBASIC-2.82□□□□□ -2.86
APOBP04114 RNU6-1255P-201ENST00000363434 112 ntBASIC-2.82□□□□□ -2.86
APOBP04114 Y_RNA.693-201ENST00000516641 110 ntBASIC-2.82□□□□□ -2.86
APOBP04114 SNORD113-6-201ENST00000363345 75 ntBASIC-2.83□□□□□ -2.86
APOBP04114 MIR519C-201ENST00000385053 87 ntBASIC-2.83□□□□□ -2.86
APOBP04114 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC-2.83□□□□□ -2.86
APOBP04114 SNORA63.4-201ENST00000362763 126 ntBASIC-2.83□□□□□ -2.86
APOBP04114 RNU6-1325P-201ENST00000364905 105 ntBASIC-2.83□□□□□ -2.86
APOBP04114 RNU5E-3P-201ENST00000515913 68 ntBASIC-2.83□□□□□ -2.86
APOBP04114 RNU6-1108P-201ENST00000516308 104 ntBASIC-2.83□□□□□ -2.86
APOBP04114 AF246928.1-201ENST00000623768 87 ntBASIC-2.84□□□□□ -2.86
APOBP04114 MIR494-201ENST00000349529 81 ntBASIC-2.84□□□□□ -2.86
APOBP04114 RNU6-451P-201ENST00000362921 107 ntBASIC-2.84□□□□□ -2.86
APOBP04114 Y_RNA.292-201ENST00000364904 97 ntBASIC-2.84□□□□□ -2.86
APOBP04114 RNU6-330P-201ENST00000363015 107 ntBASIC-2.84□□□□□ -2.86
APOBP04114 Y_RNA.686-201ENST00000516548 134 ntBASIC-2.84□□□□□ -2.86
APOBP04114 RNU7-121P-201ENST00000516604 62 ntBASIC-2.84□□□□□ -2.86
APOBP04114 MIR4528-201ENST00000577763 90 ntBASIC-2.84□□□□□ -2.86
APOBP04114 AC078883.4-201ENST00000623218 367 ntBASIC-2.84□□□□□ -2.86
APOBP04114 MIR548AI-201ENST00000579940 88 ntBASIC-2.85□□□□□ -2.86
APOBP04114 RNU6-699P-201ENST00000517081 110 ntBASIC-2.85□□□□□ -2.87
APOBP04114 Y_RNA.722-201ENST00000517279 114 ntBASIC-2.85□□□□□ -2.87
APOBP04114 Y_RNA.544-201ENST00000384650 113 ntBASIC-2.85□□□□□ -2.87
APOBP04114 RNU6-908P-201ENST00000410160 94 ntBASIC-2.85□□□□□ -2.87
APOBP04114 MIR548P-201ENST00000408336 84 ntBASIC-2.86□□□□□ -2.87
APOBP04114 RNU6-402P-201ENST00000410678 103 ntBASIC-2.86□□□□□ -2.87
APOBP04114 Y_RNA.29-201ENST00000362570 113 ntBASIC-2.86□□□□□ -2.87
APOBP04114 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC-2.87□□□□□ -2.87
APOBP04114 MIR548AL-201ENST00000578416 97 ntBASIC-2.87□□□□□ -2.87
APOBP04114 RN7SKP298-201ENST00000515950 94 ntBASIC-2.87□□□□□ -2.87
APOBP04114 AC074348.1-201ENST00000426503 132 ntBASIC-2.87□□□□□ -2.87
APOBP04114 RNU6-1024P-201ENST00000384199 107 ntBASIC-2.88□□□□□ -2.87
APOBP04114 Y_RNA.16-201ENST00000362421 102 ntBASIC-2.88□□□□□ -2.87
APOBP04114 SNORD113-1-201ENST00000365321 69 ntBASIC-2.88□□□□□ -2.87
APOBP04114 Y_RNA.599-201ENST00000410489 109 ntBASIC-2.88□□□□□ -2.87
APOBP04114 MTND2P23-201ENST00000422990 651 ntBASIC-2.89□□□□□ -2.87
APOBP04114 RNU6-890P-201ENST00000384121 107 ntBASIC-2.89□□□□□ -2.87
APOBP04114 RNU7-61P-201ENST00000515897 61 ntBASIC-2.89□□□□□ -2.87
APOBP04114 MIR3915-201ENST00000578518 97 ntBASIC-2.9□□□□□ -2.87
APOBP04114 AP001318.4-201ENST00000616637 121 ntBASIC-2.9□□□□□ -2.87
APOBP04114 Y_RNA.88-201ENST00000363029 99 ntBASIC-2.9□□□□□ -2.87
APOBP04114 SNORA26.8-201ENST00000391306 124 ntBASIC-2.9□□□□□ -2.87
APOBP04114 MIR1302-6-201ENST00000408466 90 ntBASIC-2.9□□□□□ -2.87
APOBP04114 RNU6-483P-201ENST00000384088 108 ntBASIC-2.91□□□□□ -2.87
APOBP04114 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC-2.91□□□□□ -2.88
APOBP04114 AL035470.1-201ENST00000622571 220 ntBASIC-2.91□□□□□ -2.88
APOBP04114 RNU6-1042P-201ENST00000384204 107 ntBASIC-2.92□□□□□ -2.88
APOBP04114 RNU6-380P-201ENST00000410207 107 ntBASIC-2.92□□□□□ -2.88
APOBP04114 RNU6-806P-201ENST00000365147 105 ntBASIC-2.92□□□□□ -2.88
APOBP04114 SNORA40.15-201ENST00000516884 107 ntBASIC-2.92□□□□□ -2.88
APOBP04114 MTATP8P2-201ENST00000435212 202 ntBASIC-2.93□□□□□ -2.88
APOBP04114 MIR548X-201ENST00000580069 75 ntBASIC-2.93□□□□□ -2.88
APOBP04114 Y_RNA.573-201ENST00000384763 105 ntBASIC-2.93□□□□□ -2.88
APOBP04114 Y_RNA.586-201ENST00000391146 98 ntBASIC-2.93□□□□□ -2.88
APOBP04114 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC-2.93□□□□□ -2.88
APOBP04114 MIR5690-201ENST00000583739 73 ntBASIC-2.93□□□□□ -2.88
APOBP04114 MIR4801-201ENST00000582704 82 ntBASIC-2.94□□□□□ -2.88
APOBP04114 Y_RNA.496-201ENST00000384444 101 ntBASIC-2.94□□□□□ -2.88
APOBP04114 RNU6-887P-201ENST00000410660 100 ntBASIC-2.94□□□□□ -2.88
APOBP04114 RNU6-940P-201ENST00000363433 104 ntBASIC-2.95□□□□□ -2.88
APOBP04114 Y_RNA.345-201ENST00000365384 92 ntBASIC-2.95□□□□□ -2.88
APOBP04114 SNORD45A-201ENST00000384512 84 ntBASIC-2.95□□□□□ -2.88
APOBP04114 U2.14-201ENST00000615943 113 ntBASIC-2.95□□□□□ -2.88
APOBP04114 RNU6-795P-201ENST00000516323 103 ntBASIC-2.96□□□□□ -2.88
APOBP04114 RNU6-232P-201ENST00000517144 64 ntBASIC-2.96□□□□□ -2.88
APOBP04114 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-2.97□□□□□ -2.88
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms