Protein–RNA interactions for Protein: O43915

VEGFD, Vascular endothelial growth factor D, humanhuman

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFDO43915 MIR3170-201ENST00000582699 77 ntBASIC-1.21□□□□□ -2.6
VEGFDO43915 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC-1.21□□□□□ -2.6
VEGFDO43915 U4.4-201ENST00000620626 117 ntBASIC-1.21□□□□□ -2.6
VEGFDO43915 RNA5SP405-201ENST00000363059 114 ntBASIC-1.22□□□□□ -2.6
VEGFDO43915 RNU6-340P-201ENST00000364005 107 ntBASIC-1.22□□□□□ -2.6
VEGFDO43915 SNORD114-3-201ENST00000364969 75 ntBASIC-1.22□□□□□ -2.6
VEGFDO43915 RNU6-587P-201ENST00000391282 106 ntBASIC-1.22□□□□□ -2.6
VEGFDO43915 MIR548W-201ENST00000581970 74 ntBASIC-1.22□□□□□ -2.6
VEGFDO43915 SNORA40-201ENST00000388090 126 ntBASIC-1.23□□□□□ -2.61
VEGFDO43915 snoU13.10-201ENST00000459301 103 ntBASIC-1.23□□□□□ -2.61
VEGFDO43915 RNU7-61P-201ENST00000515897 61 ntBASIC-1.23□□□□□ -2.61
VEGFDO43915 MTRNR2L9-201ENST00000622562 75 ntBASIC-1.23□□□□□ -2.61
VEGFDO43915 U6.97-201ENST00000636904 101 ntBASIC-1.23□□□□□ -2.61
VEGFDO43915 Y_RNA.74-201ENST00000362911 99 ntBASIC-1.24□□□□□ -2.61
VEGFDO43915 RNU6-330P-201ENST00000363015 107 ntBASIC-1.24□□□□□ -2.61
VEGFDO43915 Y_RNA.190-201ENST00000363964 101 ntBASIC-1.24□□□□□ -2.61
VEGFDO43915 RNU6-880P-201ENST00000384526 107 ntBASIC-1.24□□□□□ -2.61
VEGFDO43915 Y_RNA.591-201ENST00000410228 104 ntBASIC-1.24□□□□□ -2.61
VEGFDO43915 AL450471.1-201ENST00000447509 127 ntBASIC-1.24□□□□□ -2.61
VEGFDO43915 RNU6-1211P-201ENST00000459179 105 ntBASIC-1.24□□□□□ -2.61
VEGFDO43915 RNU6-982P-201ENST00000516216 102 ntBASIC-1.24□□□□□ -2.61
VEGFDO43915 RNU6-1108P-201ENST00000516308 104 ntBASIC-1.24□□□□□ -2.61
VEGFDO43915 MIR3139-201ENST00000579145 76 ntBASIC-1.24□□□□□ -2.61
VEGFDO43915 VTRNA2-1-201ENST00000602301 127 ntBASIC-1.24□□□□□ -2.61
VEGFDO43915 RNY4P27-201ENST00000363341 96 ntBASIC-1.25□□□□□ -2.61
VEGFDO43915 Y_RNA.343-201ENST00000365354 112 ntBASIC-1.25□□□□□ -2.61
VEGFDO43915 Y_RNA.375-201ENST00000365625 101 ntBASIC-1.25□□□□□ -2.61
VEGFDO43915 RNU6-1064P-201ENST00000410626 104 ntBASIC-1.25□□□□□ -2.61
VEGFDO43915 RNU6-887P-201ENST00000410660 100 ntBASIC-1.25□□□□□ -2.61
VEGFDO43915 RNU6-752P-201ENST00000516376 102 ntBASIC-1.25□□□□□ -2.61
VEGFDO43915 Y_RNA.705-201ENST00000516862 110 ntBASIC-1.25□□□□□ -2.61
VEGFDO43915 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-1.25□□□□□ -2.61
VEGFDO43915 RNU6-1034P-201ENST00000365335 101 ntBASIC-1.26□□□□□ -2.61
VEGFDO43915 RNU6-886P-201ENST00000384319 105 ntBASIC-1.26□□□□□ -2.61
VEGFDO43915 MIR548A3-201ENST00000385297 97 ntBASIC-1.26□□□□□ -2.61
VEGFDO43915 RNY3P8-201ENST00000411366 126 ntBASIC-1.26□□□□□ -2.61
VEGFDO43915 RNU6-904P-201ENST00000516206 101 ntBASIC-1.26□□□□□ -2.61
VEGFDO43915 RNU6-109P-201ENST00000516364 107 ntBASIC-1.26□□□□□ -2.61
VEGFDO43915 RNU6-184P-201ENST00000516514 107 ntBASIC-1.26□□□□□ -2.61
VEGFDO43915 RNU6-971P-201ENST00000516920 106 ntBASIC-1.26□□□□□ -2.61
VEGFDO43915 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC-1.26□□□□□ -2.61
VEGFDO43915 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-1.26□□□□□ -2.61
VEGFDO43915 RNU6-194P-201ENST00000363862 105 ntBASIC-1.27□□□□□ -2.61
VEGFDO43915 RNU6-257P-201ENST00000410238 98 ntBASIC-1.27□□□□□ -2.61
VEGFDO43915 SCARNA23-201ENST00000516060 130 ntBASIC-1.27□□□□□ -2.61
VEGFDO43915 RNU6-974P-201ENST00000384099 108 ntBASIC-1.28□□□□□ -2.61
VEGFDO43915 RNU6-1152P-201ENST00000384576 107 ntBASIC-1.28□□□□□ -2.61
VEGFDO43915 MIR581-201ENST00000384895 96 ntBASIC-1.28□□□□□ -2.61
VEGFDO43915 MIR590-201ENST00000385008 97 ntBASIC-1.28□□□□□ -2.61
VEGFDO43915 SNORD77.2-201ENST00000391045 68 ntBASIC-1.28□□□□□ -2.61
VEGFDO43915 RNU6-972P-201ENST00000391208 107 ntBASIC-1.28□□□□□ -2.61
VEGFDO43915 RNU6-1089P-201ENST00000516473 104 ntBASIC-1.28□□□□□ -2.61
VEGFDO43915 MIR3914-2-201ENST00000637339 95 ntBASIC-1.28□□□□□ -2.61
VEGFDO43915 RNU6-1094P-201ENST00000362416 104 ntBASIC-1.29□□□□□ -2.62
VEGFDO43915 SNORD1B-201ENST00000363091 84 ntBASIC-1.29□□□□□ -2.62
VEGFDO43915 SNORA41B-201ENST00000384785 128 ntBASIC-1.29□□□□□ -2.62
VEGFDO43915 MIR630-201ENST00000384957 97 ntBASIC-1.29□□□□□ -2.62
VEGFDO43915 MT-TM-201ENST00000387377 68 ntBASIC-1.29□□□□□ -2.62
VEGFDO43915 RNU6-1111P-201ENST00000391118 107 ntBASIC-1.29□□□□□ -2.62
VEGFDO43915 MIR1236-201ENST00000408340 102 ntBASIC-1.29□□□□□ -2.62
VEGFDO43915 MIR548V-201ENST00000584165 80 ntBASIC-1.29□□□□□ -2.62
VEGFDO43915 SNORD19B.1-201ENST00000630615 80 ntBASIC-1.29□□□□□ -2.62
VEGFDO43915 MIRLET7A2-201ENST00000362105 72 ntBASIC-1.3□□□□□ -2.62
VEGFDO43915 RNU6-1081P-201ENST00000384537 107 ntBASIC-1.3□□□□□ -2.62
VEGFDO43915 MIR579-201ENST00000385221 98 ntBASIC-1.3□□□□□ -2.62
VEGFDO43915 RNU6-604P-201ENST00000390917 100 ntBASIC-1.3□□□□□ -2.62
VEGFDO43915 SNORD113-2-201ENST00000391082 72 ntBASIC-1.3□□□□□ -2.62
VEGFDO43915 MIR1207-201ENST00000408249 87 ntBASIC-1.3□□□□□ -2.62
VEGFDO43915 RNU6-346P-201ENST00000516288 111 ntBASIC-1.3□□□□□ -2.62
VEGFDO43915 RNU6-537P-201ENST00000517277 103 ntBASIC-1.3□□□□□ -2.62
VEGFDO43915 MIR4723-201ENST00000585070 81 ntBASIC-1.3□□□□□ -2.62
VEGFDO43915 U7.3-201ENST00000616123 62 ntBASIC-1.3□□□□□ -2.62
VEGFDO43915 Y_RNA.71-201ENST00000362892 104 ntBASIC-1.31□□□□□ -2.62
VEGFDO43915 TRAJ33-201ENST00000390504 57 ntAPPRIS P1 BASIC-1.31□□□□□ -2.62
VEGFDO43915 MIR23C-201ENST00000579846 100 ntBASIC-1.31□□□□□ -2.62
VEGFDO43915 Y_RNA.781-201ENST00000620301 103 ntBASIC-1.31□□□□□ -2.62
VEGFDO43915 RNU6-247P-201ENST00000362636 107 ntBASIC-1.32□□□□□ -2.62
VEGFDO43915 RNU6-698P-201ENST00000363523 107 ntBASIC-1.32□□□□□ -2.62
VEGFDO43915 SNORD116-10-201ENST00000363791 102 ntBASIC-1.32□□□□□ -2.62
VEGFDO43915 RNU6-1107P-201ENST00000364817 104 ntBASIC-1.32□□□□□ -2.62
VEGFDO43915 RNU6-34P-201ENST00000364874 107 ntBASIC-1.32□□□□□ -2.62
VEGFDO43915 RNU6-669P-201ENST00000365575 107 ntBASIC-1.32□□□□□ -2.62
VEGFDO43915 Y_RNA.475-201ENST00000384345 101 ntBASIC-1.32□□□□□ -2.62
VEGFDO43915 Y_RNA.532-201ENST00000384590 113 ntBASIC-1.32□□□□□ -2.62
VEGFDO43915 SNORD63.2-201ENST00000516303 64 ntBASIC-1.32□□□□□ -2.62
VEGFDO43915 RNU6-1247P-201ENST00000516622 98 ntBASIC-1.32□□□□□ -2.62
VEGFDO43915 RNU7-151P-201ENST00000516930 53 ntBASIC-1.32□□□□□ -2.62
VEGFDO43915 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-1.32□□□□□ -2.62
VEGFDO43915 Y_RNA.218-201ENST00000364218 104 ntBASIC-1.33□□□□□ -2.62
VEGFDO43915 Y_RNA.281-201ENST00000364774 94 ntBASIC-1.33□□□□□ -2.62
VEGFDO43915 RNU6-1306P-201ENST00000365219 99 ntBASIC-1.33□□□□□ -2.62
VEGFDO43915 SNORD116-16-201ENST00000384533 92 ntBASIC-1.33□□□□□ -2.62
VEGFDO43915 MIR548AA1-201ENST00000384971 97 ntBASIC-1.33□□□□□ -2.62
VEGFDO43915 MIR496-201ENST00000385226 102 ntBASIC-1.33□□□□□ -2.62
VEGFDO43915 Y_RNA.684-201ENST00000516510 99 ntBASIC-1.33□□□□□ -2.62
VEGFDO43915 Y_RNA.699-201ENST00000516803 93 ntBASIC-1.33□□□□□ -2.62
VEGFDO43915 MIR7978-201ENST00000636158 59 ntBASIC-1.33□□□□□ -2.62
VEGFDO43915 RNU6-995P-201ENST00000391244 107 ntBASIC-1.34□□□□□ -2.62
VEGFDO43915 RNU6-681P-201ENST00000364012 104 ntBASIC-1.35□□□□□ -2.63
VEGFDO43915 SNORA8.1-201ENST00000384250 140 ntBASIC-1.35□□□□□ -2.63
Retrieved 100 of 98,524 protein–RNA pairs in 178.8 ms