Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 Y_RNA.158-201ENST00000363651 101 ntBASIC-4.35□□□□□ -3.11
CHD1O14646 Y_RNA.276-201ENST00000364732 109 ntBASIC-4.35□□□□□ -3.11
CHD1O14646 U4.5-201ENST00000617137 123 ntBASIC-4.35□□□□□ -3.11
CHD1O14646 MIR3658-201ENST00000636291 56 ntBASIC-4.35□□□□□ -3.11
CHD1O14646 RNU6-239P-201ENST00000390990 99 ntBASIC-4.36□□□□□ -3.11
CHD1O14646 RNU2-16P-201ENST00000410712 136 ntBASIC-4.36□□□□□ -3.11
CHD1O14646 RNU6-172P-201ENST00000411000 93 ntBASIC-4.36□□□□□ -3.11
CHD1O14646 U2.14-201ENST00000615943 113 ntBASIC-4.36□□□□□ -3.11
CHD1O14646 RNU7-153P-201ENST00000516455 62 ntBASIC-4.37□□□□□ -3.11
CHD1O14646 MIR4679-2-201ENST00000578358 77 ntBASIC-4.37□□□□□ -3.11
CHD1O14646 RNU6-450P-201ENST00000364654 107 ntBASIC-4.38□□□□□ -3.11
CHD1O14646 Y_RNA.129-201ENST00000363392 110 ntBASIC-4.38□□□□□ -3.11
CHD1O14646 SNORD127-201ENST00000458892 86 ntBASIC-4.38□□□□□ -3.11
CHD1O14646 RNU6-68P-201ENST00000516576 104 ntBASIC-4.38□□□□□ -3.11
CHD1O14646 Y_RNA.210-201ENST00000364161 110 ntBASIC-4.39□□□□□ -3.11
CHD1O14646 MTND4LP1-201ENST00000446263 157 ntBASIC-4.39□□□□□ -3.11
CHD1O14646 SNORD45.1-201ENST00000363181 77 ntBASIC-4.4□□□□□ -3.11
CHD1O14646 MIR1277-201ENST00000408536 78 ntBASIC-4.4□□□□□ -3.11
CHD1O14646 Y_RNA.240-201ENST00000364469 95 ntBASIC-4.41□□□□□ -3.11
CHD1O14646 RNU6-867P-201ENST00000364956 107 ntBASIC-4.41□□□□□ -3.11
CHD1O14646 MTND3P3-201ENST00000505004 126 ntBASIC-4.41□□□□□ -3.11
CHD1O14646 Y_RNA.705-201ENST00000516862 110 ntBASIC-4.41□□□□□ -3.11
CHD1O14646 Y_RNA.11-201ENST00000362375 109 ntBASIC-4.41□□□□□ -3.12
CHD1O14646 RNU6-887P-201ENST00000410660 100 ntBASIC-4.41□□□□□ -3.12
CHD1O14646 Y_RNA.96-201ENST00000363092 109 ntBASIC-4.42□□□□□ -3.12
CHD1O14646 RNU6-737P-201ENST00000365370 107 ntBASIC-4.42□□□□□ -3.12
CHD1O14646 Y_RNA.516-201ENST00000384541 124 ntBASIC-4.42□□□□□ -3.12
CHD1O14646 RNU7-121P-201ENST00000516604 62 ntBASIC-4.43□□□□□ -3.12
CHD1O14646 RNU6-176P-201ENST00000517196 105 ntBASIC-4.43□□□□□ -3.12
CHD1O14646 RNU6-537P-201ENST00000517277 103 ntBASIC-4.43□□□□□ -3.12
CHD1O14646 RNU6-795P-201ENST00000516323 103 ntBASIC-4.44□□□□□ -3.12
CHD1O14646 RNA5SP173-201ENST00000364857 136 ntBASIC-4.45□□□□□ -3.12
CHD1O14646 RNU6-182P-201ENST00000516970 105 ntBASIC-4.45□□□□□ -3.12
CHD1O14646 Y_RNA.277-201ENST00000364754 102 ntBASIC-4.46□□□□□ -3.12
CHD1O14646 RNU6-554P-201ENST00000410466 106 ntBASIC-4.46□□□□□ -3.12
CHD1O14646 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC-4.46□□□□□ -3.12
CHD1O14646 Y_RNA.609-201ENST00000410669 89 ntBASIC-4.46□□□□□ -3.12
CHD1O14646 RNU7-160P-201ENST00000516660 62 ntBASIC-4.46□□□□□ -3.12
CHD1O14646 RNU6-1227P-201ENST00000383981 107 ntBASIC-4.47□□□□□ -3.13
CHD1O14646 MTND2P23-201ENST00000422990 651 ntBASIC-4.47□□□□□ -3.13
CHD1O14646 AC069439.1-201ENST00000494739 167 ntBASIC-4.47□□□□□ -3.13
CHD1O14646 RNU6-277P-201ENST00000516272 106 ntBASIC-4.47□□□□□ -3.13
CHD1O14646 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC-4.48□□□□□ -3.13
CHD1O14646 RNU6-1047P-201ENST00000364418 107 ntBASIC-4.49□□□□□ -3.13
CHD1O14646 Y_RNA.632-201ENST00000459189 102 ntBASIC-4.49□□□□□ -3.13
CHD1O14646 RNU6-1161P-201ENST00000516176 102 ntBASIC-4.49□□□□□ -3.13
CHD1O14646 RNU6-1108P-201ENST00000516308 104 ntBASIC-4.49□□□□□ -3.13
CHD1O14646 RNU6-781P-201ENST00000516377 101 ntBASIC-4.49□□□□□ -3.13
CHD1O14646 MIR3974-201ENST00000637126 96 ntBASIC-4.49□□□□□ -3.13
CHD1O14646 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC-4.49□□□□□ -3.13
CHD1O14646 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC-4.49□□□□□ -3.13
CHD1O14646 Y_RNA.709-201ENST00000516952 92 ntBASIC-4.51□□□□□ -3.13
CHD1O14646 MIAT_exon5_2.1-201ENST00000613562 85 ntBASIC-4.52□□□□□ -3.13
CHD1O14646 RNU6-330P-201ENST00000363015 107 ntBASIC-4.52□□□□□ -3.13
CHD1O14646 SNORD116-10-201ENST00000363791 102 ntBASIC-4.52□□□□□ -3.13
CHD1O14646 RNU6-915P-201ENST00000364943 103 ntBASIC-4.52□□□□□ -3.13
CHD1O14646 RNU6-604P-201ENST00000390917 100 ntBASIC-4.52□□□□□ -3.13
CHD1O14646 SNORD115-45-201ENST00000391078 81 ntBASIC-4.52□□□□□ -3.13
CHD1O14646 Y_RNA.626-201ENST00000411288 95 ntBASIC-4.52□□□□□ -3.13
CHD1O14646 Y_RNA.649-201ENST00000459077 103 ntBASIC-4.52□□□□□ -3.13
CHD1O14646 MIR5009-201ENST00000578736 100 ntBASIC-4.52□□□□□ -3.13
CHD1O14646 RNU6-624P-201ENST00000363411 107 ntBASIC-4.53□□□□□ -3.13
CHD1O14646 SNORD45.2-201ENST00000363552 72 ntBASIC-4.53□□□□□ -3.13
CHD1O14646 RNU6-590P-201ENST00000365039 107 ntBASIC-4.54□□□□□ -3.14
CHD1O14646 RNU6-300P-201ENST00000459080 104 ntBASIC-4.54□□□□□ -3.14
CHD1O14646 Y_RNA.194-201ENST00000363985 102 ntBASIC-4.55□□□□□ -3.14
CHD1O14646 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC-4.56□□□□□ -3.14
CHD1O14646 Y_RNA.58-201ENST00000362807 102 ntBASIC-4.57□□□□□ -3.14
CHD1O14646 MIR519C-201ENST00000385053 87 ntBASIC-4.57□□□□□ -3.14
CHD1O14646 MT-TL1-201ENST00000386347 75 ntBASIC-4.57□□□□□ -3.14
CHD1O14646 Y_RNA.688-201ENST00000516565 95 ntBASIC-4.57□□□□□ -3.14
CHD1O14646 Y_RNA.717-201ENST00000517106 92 ntBASIC-4.57□□□□□ -3.14
CHD1O14646 RNU6-988P-201ENST00000519081 107 ntBASIC-4.57□□□□□ -3.14
CHD1O14646 AP001340.1-201ENST00000624405 217 ntBASIC-4.57□□□□□ -3.14
CHD1O14646 RNU6-460P-201ENST00000391158 108 ntBASIC-4.58□□□□□ -3.14
CHD1O14646 RNU6-918P-201ENST00000391219 106 ntBASIC-4.58□□□□□ -3.14
CHD1O14646 RNU6-718P-201ENST00000516166 105 ntBASIC-4.58□□□□□ -3.14
CHD1O14646 RNU6-1296P-201ENST00000383879 107 ntBASIC-4.58□□□□□ -3.14
CHD1O14646 MIR8053-201ENST00000613344 75 ntBASIC-4.58□□□□□ -3.14
CHD1O14646 MIR4426-201ENST00000640330 63 ntBASIC-4.58□□□□□ -3.14
CHD1O14646 SNORA8.1-201ENST00000384250 140 ntBASIC-4.59□□□□□ -3.14
CHD1O14646 RNU6-303P-201ENST00000517091 106 ntBASIC-4.59□□□□□ -3.14
CHD1O14646 SNORD113.1-201ENST00000363280 73 ntBASIC-4.6□□□□□ -3.15
CHD1O14646 Y_RNA.69-201ENST00000362885 109 ntBASIC-4.6□□□□□ -3.15
CHD1O14646 MIR124-1-201ENST00000385275 85 ntBASIC-4.6□□□□□ -3.15
CHD1O14646 SNORD19B-201ENST00000459623 84 ntBASIC-4.6□□□□□ -3.15
CHD1O14646 SNORD116-4-201ENST00000384733 96 ntBASIC-4.61□□□□□ -3.15
CHD1O14646 AC113195.1-201ENST00000579952 141 ntBASIC-4.61□□□□□ -3.15
CHD1O14646 AL158147.1-201ENST00000443970 75 ntBASIC-4.62□□□□□ -3.15
CHD1O14646 SCARNA23-201ENST00000516060 130 ntBASIC-4.62□□□□□ -3.15
CHD1O14646 AL035470.1-201ENST00000622571 220 ntBASIC-4.62□□□□□ -3.15
CHD1O14646 Y_RNA.160-201ENST00000363677 92 ntBASIC-4.63□□□□□ -3.15
CHD1O14646 RNU6-755P-201ENST00000364400 103 ntBASIC-4.63□□□□□ -3.15
CHD1O14646 Y_RNA.579-201ENST00000390939 94 ntBASIC-4.64□□□□□ -3.15
CHD1O14646 RNU7-197P-201ENST00000458836 62 ntBASIC-4.64□□□□□ -3.15
CHD1O14646 RNU6-810P-201ENST00000364001 107 ntBASIC-4.65□□□□□ -3.15
CHD1O14646 MIR1302-1-201ENST00000637932 143 ntBASIC-4.65□□□□□ -3.15
CHD1O14646 U6.104-201ENST00000637979 90 ntBASIC-4.65□□□□□ -3.15
CHD1O14646 Y_RNA.478-201ENST00000384358 107 ntBASIC-4.66□□□□□ -3.15
CHD1O14646 RNU6-1206P-201ENST00000516339 103 ntBASIC-4.66□□□□□ -3.15
Retrieved 100 of 98,524 protein–RNA pairs in 173.9 ms