Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 RNU6-834P-201ENST00000362367 110 ntBASIC-1.74□□□□□ -2.69
CUX2O14529 Y_RNA.290-201ENST00000364879 114 ntBASIC-1.74□□□□□ -2.69
CUX2O14529 SNORD116-22-201ENST00000384430 92 ntBASIC-1.74□□□□□ -2.69
CUX2O14529 MIR548C-201ENST00000384815 97 ntBASIC-1.74□□□□□ -2.69
CUX2O14529 RNU6-479P-201ENST00000516348 105 ntBASIC-1.74□□□□□ -2.69
CUX2O14529 MIR3675-201ENST00000583661 73 ntBASIC-1.74□□□□□ -2.69
CUX2O14529 FAS-AS1.1-201ENST00000615327 126 ntBASIC-1.74□□□□□ -2.69
CUX2O14529 Y_RNA.232-201ENST00000364369 96 ntBASIC-1.75□□□□□ -2.69
CUX2O14529 MIR3668-201ENST00000582138 75 ntBASIC-1.75□□□□□ -2.69
CUX2O14529 RNU6-624P-201ENST00000363411 107 ntBASIC-1.75□□□□□ -2.69
CUX2O14529 U7.5-201ENST00000517224 61 ntBASIC-1.75□□□□□ -2.69
CUX2O14529 MIR4668-201ENST00000582284 70 ntBASIC-1.75□□□□□ -2.69
CUX2O14529 SNORD115-22-201ENST00000364456 82 ntBASIC-1.76□□□□□ -2.69
CUX2O14529 Y_RNA.403-201ENST00000383977 101 ntBASIC-1.77□□□□□ -2.69
CUX2O14529 RNU7-88P-201ENST00000458752 63 ntBASIC-1.77□□□□□ -2.69
CUX2O14529 RNU6-732P-201ENST00000516033 103 ntBASIC-1.77□□□□□ -2.69
CUX2O14529 RNU6-589P-201ENST00000516485 107 ntBASIC-1.77□□□□□ -2.69
CUX2O14529 RNU6-1238P-201ENST00000517215 102 ntBASIC-1.77□□□□□ -2.69
CUX2O14529 MIR4490-201ENST00000582647 84 ntBASIC-1.77□□□□□ -2.69
CUX2O14529 MIR507-201ENST00000385234 94 ntBASIC-1.78□□□□□ -2.69
CUX2O14529 RNU6-576P-201ENST00000390854 102 ntBASIC-1.78□□□□□ -2.69
CUX2O14529 AL031737.1-201ENST00000450125 223 ntBASIC-1.78□□□□□ -2.69
CUX2O14529 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-1.78□□□□□ -2.69
CUX2O14529 RNU6-1117P-201ENST00000384525 104 ntBASIC-1.79□□□□□ -2.7
CUX2O14529 U2.7-201ENST00000619197 100 ntBASIC-1.79□□□□□ -2.7
CUX2O14529 RNU6-645P-201ENST00000364649 106 ntBASIC-1.8□□□□□ -2.7
CUX2O14529 RNU6-1168P-201ENST00000390831 104 ntBASIC-1.8□□□□□ -2.7
CUX2O14529 RNU6-807P-201ENST00000516805 107 ntBASIC-1.8□□□□□ -2.7
CUX2O14529 RNU6-22P-201ENST00000384355 107 ntBASIC-1.81□□□□□ -2.7
CUX2O14529 MIR29B1-201ENST00000385015 81 ntBASIC-1.81□□□□□ -2.7
CUX2O14529 Y_RNA.709-201ENST00000516952 92 ntBASIC-1.81□□□□□ -2.7
CUX2O14529 RNU6-540P-201ENST00000384622 101 ntBASIC-1.82□□□□□ -2.7
CUX2O14529 RNU7-134P-201ENST00000458997 64 ntBASIC-1.82□□□□□ -2.7
CUX2O14529 SNORA40.13-201ENST00000516379 120 ntBASIC-1.82□□□□□ -2.7
CUX2O14529 MIR6818-201ENST00000621576 65 ntBASIC-1.82□□□□□ -2.7
CUX2O14529 MIR548M-201ENST00000408260 86 ntBASIC-1.82□□□□□ -2.7
CUX2O14529 Y_RNA.620-201ENST00000411009 88 ntBASIC-1.82□□□□□ -2.7
CUX2O14529 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC-1.82□□□□□ -2.7
CUX2O14529 Y_RNA.543-201ENST00000384649 107 ntBASIC-1.83□□□□□ -2.7
CUX2O14529 TMSB4XP3-201ENST00000445144 114 ntBASIC-1.83□□□□□ -2.7
CUX2O14529 MIR4520-1-201ENST00000582609 70 ntBASIC-1.83□□□□□ -2.7
CUX2O14529 MIR5683-201ENST00000636514 76 ntBASIC-1.84□□□□□ -2.7
CUX2O14529 RNU6-1154P-201ENST00000391001 104 ntBASIC-1.85□□□□□ -2.71
CUX2O14529 MIR889-201ENST00000401280 79 ntBASIC-1.85□□□□□ -2.71
CUX2O14529 MIR548Q-201ENST00000408404 100 ntBASIC-1.85□□□□□ -2.71
CUX2O14529 SNORD45.1-201ENST00000363181 77 ntBASIC-1.86□□□□□ -2.71
CUX2O14529 Y_RNA.236-201ENST00000364427 111 ntBASIC-1.86□□□□□ -2.71
CUX2O14529 RNU6-983P-201ENST00000516004 103 ntBASIC-1.86□□□□□ -2.71
CUX2O14529 RNU6-303P-201ENST00000517091 106 ntBASIC-1.86□□□□□ -2.71
CUX2O14529 AP001318.4-201ENST00000616637 121 ntBASIC-1.86□□□□□ -2.71
CUX2O14529 SNORD19-201ENST00000391191 68 ntBASIC-1.87□□□□□ -2.71
CUX2O14529 MIR450A1-201ENST00000362262 91 ntBASIC-1.88□□□□□ -2.71
CUX2O14529 Y_RNA.74-201ENST00000362911 99 ntBASIC-1.88□□□□□ -2.71
CUX2O14529 MIR527-201ENST00000385244 85 ntBASIC-1.88□□□□□ -2.71
CUX2O14529 RNU6-557P-201ENST00000516842 110 ntBASIC-1.88□□□□□ -2.71
CUX2O14529 RNU6-1174P-201ENST00000517278 101 ntBASIC-1.88□□□□□ -2.71
CUX2O14529 RNA5SP26-201ENST00000362406 119 ntBASIC-1.88□□□□□ -2.71
CUX2O14529 RNU6-1325P-201ENST00000364905 105 ntBASIC-1.88□□□□□ -2.71
CUX2O14529 RNU6-1089P-201ENST00000516473 104 ntBASIC-1.88□□□□□ -2.71
CUX2O14529 MIR548AG1-201ENST00000579932 66 ntBASIC-1.88□□□□□ -2.71
CUX2O14529 MIR6502-201ENST00000617296 76 ntBASIC-1.88□□□□□ -2.71
CUX2O14529 RNU6-686P-201ENST00000364839 107 ntBASIC-1.89□□□□□ -2.71
CUX2O14529 RNU6-246P-201ENST00000384702 107 ntBASIC-1.89□□□□□ -2.71
CUX2O14529 RNU6-330P-201ENST00000363015 107 ntBASIC-1.9□□□□□ -2.71
CUX2O14529 RNU6-380P-201ENST00000410207 107 ntBASIC-1.91□□□□□ -2.72
CUX2O14529 RNU6-313P-201ENST00000516317 112 ntBASIC-1.91□□□□□ -2.72
CUX2O14529 MIR548BB-201ENST00000626714 66 ntBASIC-1.91□□□□□ -2.72
CUX2O14529 SNORA8.1-201ENST00000384250 140 ntBASIC-1.92□□□□□ -2.72
CUX2O14529 Y_RNA.611-201ENST00000410682 108 ntBASIC-1.92□□□□□ -2.72
CUX2O14529 RNU6-267P-201ENST00000516714 103 ntBASIC-1.92□□□□□ -2.72
CUX2O14529 MALAT1.1-201ENST00000618249 95 ntBASIC-1.92□□□□□ -2.72
CUX2O14529 MIR429-201ENST00000362106 83 ntBASIC-1.93□□□□□ -2.72
CUX2O14529 RNU6-402P-201ENST00000410678 103 ntBASIC-1.93□□□□□ -2.72
CUX2O14529 AP002795.1-201ENST00000534879 84 ntBASIC-1.93□□□□□ -2.72
CUX2O14529 RNU6-164P-201ENST00000364604 103 ntBASIC-1.94□□□□□ -2.72
CUX2O14529 RNU6-1247P-201ENST00000516622 98 ntBASIC-1.94□□□□□ -2.72
CUX2O14529 MIR1297-201ENST00000637311 77 ntBASIC-1.94□□□□□ -2.72
CUX2O14529 RNU6-219P-201ENST00000364728 107 ntBASIC-1.95□□□□□ -2.72
CUX2O14529 RNU6-458P-201ENST00000384179 107 ntBASIC-1.95□□□□□ -2.72
CUX2O14529 RNU6-129P-201ENST00000391022 107 ntBASIC-1.95□□□□□ -2.72
CUX2O14529 RNU2-51P-201ENST00000410708 197 ntBASIC-1.95□□□□□ -2.72
CUX2O14529 RNU7-174P-201ENST00000516248 59 ntBASIC-1.95□□□□□ -2.72
CUX2O14529 U6.58-201ENST00000613107 107 ntBASIC-1.95□□□□□ -2.72
CUX2O14529 SNORD18.1-201ENST00000363807 70 ntBASIC-1.96□□□□□ -2.72
CUX2O14529 Y_RNA.426-201ENST00000384068 113 ntBASIC-1.97□□□□□ -2.72
CUX2O14529 RNA5SP86-201ENST00000390869 98 ntBASIC-1.97□□□□□ -2.72
CUX2O14529 RNY4P18-201ENST00000391107 89 ntBASIC-1.97□□□□□ -2.72
CUX2O14529 AC074348.1-201ENST00000426503 132 ntBASIC-1.97□□□□□ -2.72
CUX2O14529 Y_RNA.325-201ENST00000365171 122 ntBASIC-1.98□□□□□ -2.73
CUX2O14529 MIR496-201ENST00000385226 102 ntBASIC-1.98□□□□□ -2.73
CUX2O14529 RNU6-696P-201ENST00000390834 107 ntBASIC-1.98□□□□□ -2.73
CUX2O14529 RPL35AP4-201ENST00000412007 102 ntBASIC-1.98□□□□□ -2.73
CUX2O14529 MTND4LP1-201ENST00000446263 157 ntBASIC-1.98□□□□□ -2.73
CUX2O14529 RNU6-982P-201ENST00000516216 102 ntBASIC-1.98□□□□□ -2.73
CUX2O14529 MIRLET7A1-201ENST00000362295 80 ntBASIC-1.99□□□□□ -2.73
CUX2O14529 Y_RNA.273-201ENST00000364703 102 ntBASIC-1.99□□□□□ -2.73
CUX2O14529 AC006160.2-201ENST00000637708 154 ntBASIC-1.99□□□□□ -2.73
CUX2O14529 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-2□□□□□ -2.73
CUX2O14529 RNU6-1262P-201ENST00000516217 96 ntBASIC-2□□□□□ -2.73
CUX2O14529 RNU6-698P-201ENST00000363523 107 ntBASIC-2.01□□□□□ -2.73
Retrieved 100 of 98,524 protein–RNA pairs in 173 ms