Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 MIR450A1-201ENST00000362262 91 ntBASIC-1.49□□□□□ -2.65
DDX39AO00148 SNORD116-22-201ENST00000384430 92 ntBASIC-1.49□□□□□ -2.65
DDX39AO00148 MIR548C-201ENST00000384815 97 ntBASIC-1.49□□□□□ -2.65
DDX39AO00148 MIR1285-2-201ENST00000408311 88 ntBASIC-1.49□□□□□ -2.65
DDX39AO00148 RNU7-88P-201ENST00000458752 63 ntBASIC-1.49□□□□□ -2.65
DDX39AO00148 RNU6-479P-201ENST00000516348 105 ntBASIC-1.49□□□□□ -2.65
DDX39AO00148 U7.5-201ENST00000517224 61 ntBASIC-1.49□□□□□ -2.65
DDX39AO00148 RNU6-1117P-201ENST00000384525 104 ntBASIC-1.5□□□□□ -2.65
DDX39AO00148 RNA5SP180-201ENST00000516181 101 ntBASIC-1.5□□□□□ -2.65
DDX39AO00148 RNU6-219P-201ENST00000364728 107 ntBASIC-1.51□□□□□ -2.65
DDX39AO00148 RNU6-557P-201ENST00000516842 110 ntBASIC-1.51□□□□□ -2.65
DDX39AO00148 RNU6-303P-201ENST00000517091 106 ntBASIC-1.51□□□□□ -2.65
DDX39AO00148 MIR3675-201ENST00000583661 73 ntBASIC-1.51□□□□□ -2.65
DDX39AO00148 MALAT1.1-201ENST00000618249 95 ntBASIC-1.51□□□□□ -2.65
DDX39AO00148 RNU6-330P-201ENST00000363015 107 ntBASIC-1.52□□□□□ -2.65
DDX39AO00148 MIR507-201ENST00000385234 94 ntBASIC-1.52□□□□□ -2.65
DDX39AO00148 RNU6-576P-201ENST00000390854 102 ntBASIC-1.52□□□□□ -2.65
DDX39AO00148 RNU7-134P-201ENST00000458997 64 ntBASIC-1.52□□□□□ -2.65
DDX39AO00148 AP001318.4-201ENST00000616637 121 ntBASIC-1.52□□□□□ -2.65
DDX39AO00148 RNA5SP26-201ENST00000362406 119 ntBASIC-1.53□□□□□ -2.65
DDX39AO00148 SNORD114-3-201ENST00000364969 75 ntBASIC-1.53□□□□□ -2.65
DDX39AO00148 RNU6-497P-201ENST00000365316 104 ntBASIC-1.53□□□□□ -2.65
DDX39AO00148 MT-TR-201ENST00000387439 65 ntBASIC-1.53□□□□□ -2.65
DDX39AO00148 RNU6-1154P-201ENST00000391001 104 ntBASIC-1.53□□□□□ -2.65
DDX39AO00148 SNORD19-201ENST00000391191 68 ntBASIC-1.53□□□□□ -2.65
DDX39AO00148 RNU6-402P-201ENST00000410678 103 ntBASIC-1.53□□□□□ -2.65
DDX39AO00148 SNORA40.13-201ENST00000516379 120 ntBASIC-1.53□□□□□ -2.65
DDX39AO00148 SNORA8.1-201ENST00000384250 140 ntBASIC-1.54□□□□□ -2.66
DDX39AO00148 RNU6-1174P-201ENST00000517278 101 ntBASIC-1.54□□□□□ -2.66
DDX39AO00148 MIR4441-201ENST00000582623 100 ntBASIC-1.54□□□□□ -2.66
DDX39AO00148 MIR548BB-201ENST00000626714 66 ntBASIC-1.54□□□□□ -2.66
DDX39AO00148 MIR5683-201ENST00000636514 76 ntBASIC-1.54□□□□□ -2.66
DDX39AO00148 RNU6-686P-201ENST00000364839 107 ntBASIC-1.55□□□□□ -2.66
DDX39AO00148 MIR548M-201ENST00000408260 86 ntBASIC-1.55□□□□□ -2.66
DDX39AO00148 RNU2-51P-201ENST00000410708 197 ntBASIC-1.55□□□□□ -2.66
DDX39AO00148 RNU6-313P-201ENST00000516317 112 ntBASIC-1.55□□□□□ -2.66
DDX39AO00148 RNU6-267P-201ENST00000516714 103 ntBASIC-1.55□□□□□ -2.66
DDX39AO00148 AP002795.1-201ENST00000534879 84 ntBASIC-1.55□□□□□ -2.66
DDX39AO00148 MIR4490-201ENST00000582647 84 ntBASIC-1.55□□□□□ -2.66
DDX39AO00148 RNU6-604P-201ENST00000390917 100 ntBASIC-1.57□□□□□ -2.66
DDX39AO00148 RNY4P18-201ENST00000391107 89 ntBASIC-1.57□□□□□ -2.66
DDX39AO00148 MIR1207-201ENST00000408249 87 ntBASIC-1.57□□□□□ -2.66
DDX39AO00148 AC074348.1-201ENST00000426503 132 ntBASIC-1.57□□□□□ -2.66
DDX39AO00148 RNU7-174P-201ENST00000516248 59 ntBASIC-1.57□□□□□ -2.66
DDX39AO00148 Y_RNA.365-201ENST00000365537 102 ntBASIC-1.58□□□□□ -2.66
DDX39AO00148 MIR527-201ENST00000385244 85 ntBASIC-1.58□□□□□ -2.66
DDX39AO00148 MIRLET7A1-201ENST00000362295 80 ntBASIC-1.59□□□□□ -2.66
DDX39AO00148 RNU6-478P-201ENST00000363904 110 ntBASIC-1.59□□□□□ -2.66
DDX39AO00148 Y_RNA.236-201ENST00000364427 111 ntBASIC-1.59□□□□□ -2.66
DDX39AO00148 Y_RNA.273-201ENST00000364703 102 ntBASIC-1.59□□□□□ -2.66
DDX39AO00148 RNU6-458P-201ENST00000384179 107 ntBASIC-1.59□□□□□ -2.66
DDX39AO00148 RNU6-1089P-201ENST00000516473 104 ntBASIC-1.59□□□□□ -2.66
DDX39AO00148 U6.58-201ENST00000613107 107 ntBASIC-1.59□□□□□ -2.66
DDX39AO00148 Y_RNA.74-201ENST00000362911 99 ntBASIC-1.6□□□□□ -2.67
DDX39AO00148 SNORD45.1-201ENST00000363181 77 ntBASIC-1.6□□□□□ -2.67
DDX39AO00148 RNU6-982P-201ENST00000516216 102 ntBASIC-1.6□□□□□ -2.67
DDX39AO00148 Y_RNA.55-201ENST00000362797 102 ntBASIC-1.61□□□□□ -2.67
DDX39AO00148 RNU6-129P-201ENST00000391022 107 ntBASIC-1.61□□□□□ -2.67
DDX39AO00148 Y_RNA.611-201ENST00000410682 108 ntBASIC-1.61□□□□□ -2.67
DDX39AO00148 RNU6-706P-201ENST00000517229 104 ntBASIC-1.61□□□□□ -2.67
DDX39AO00148 RNU6-1325P-201ENST00000364905 105 ntBASIC-1.62□□□□□ -2.67
DDX39AO00148 Y_RNA.532-201ENST00000384590 113 ntBASIC-1.62□□□□□ -2.67
DDX39AO00148 MIR548Q-201ENST00000408404 100 ntBASIC-1.62□□□□□ -2.67
DDX39AO00148 RNU6-164P-201ENST00000364604 103 ntBASIC-1.63□□□□□ -2.67
DDX39AO00148 Y_RNA.325-201ENST00000365171 122 ntBASIC-1.63□□□□□ -2.67
DDX39AO00148 AC138207.3-201ENST00000585289 166 ntBASIC-1.63□□□□□ -2.67
DDX39AO00148 RNU6-755P-201ENST00000364400 103 ntBASIC-1.64□□□□□ -2.67
DDX39AO00148 Y_RNA.282-201ENST00000364793 102 ntBASIC-1.64□□□□□ -2.67
DDX39AO00148 MIR488-201ENST00000365739 83 ntBASIC-1.64□□□□□ -2.67
DDX39AO00148 RNU6-696P-201ENST00000390834 107 ntBASIC-1.64□□□□□ -2.67
DDX39AO00148 RNU6-587P-201ENST00000391282 106 ntBASIC-1.64□□□□□ -2.67
DDX39AO00148 MIR429-201ENST00000362106 83 ntBASIC-1.65□□□□□ -2.67
DDX39AO00148 RNU6-698P-201ENST00000363523 107 ntBASIC-1.65□□□□□ -2.67
DDX39AO00148 RNU6-34P-201ENST00000364874 107 ntBASIC-1.65□□□□□ -2.67
DDX39AO00148 RPL35AP4-201ENST00000412007 102 ntBASIC-1.65□□□□□ -2.67
DDX39AO00148 MIR3910-1-201ENST00000580936 111 ntBASIC-1.65□□□□□ -2.67
DDX39AO00148 MIR1297-201ENST00000637311 77 ntBASIC-1.65□□□□□ -2.67
DDX39AO00148 RNU6-675P-201ENST00000384236 104 ntBASIC-1.66□□□□□ -2.68
DDX39AO00148 MIR4484-201ENST00000582855 83 ntBASIC-1.66□□□□□ -2.68
DDX39AO00148 Y_RNA.109-201ENST00000363215 102 ntBASIC-1.67□□□□□ -2.68
DDX39AO00148 RNU6-640P-201ENST00000363693 105 ntBASIC-1.67□□□□□ -2.68
DDX39AO00148 Y_RNA.219-201ENST00000364232 113 ntBASIC-1.67□□□□□ -2.68
DDX39AO00148 MIR8485-201ENST00000401372 91 ntBASIC-1.67□□□□□ -2.68
DDX39AO00148 AC090616.4-201ENST00000448026 115 ntBASIC-1.67□□□□□ -2.68
DDX39AO00148 AC091912.2-201ENST00000624798 167 ntBASIC-1.67□□□□□ -2.68
DDX39AO00148 RNU6-32P-201ENST00000383948 107 ntBASIC-1.68□□□□□ -2.68
DDX39AO00148 RNU6-13P-201ENST00000384248 107 ntBASIC-1.68□□□□□ -2.68
DDX39AO00148 RNU6-12P-201ENST00000384604 107 ntBASIC-1.68□□□□□ -2.68
DDX39AO00148 RNU6-41P-201ENST00000384741 107 ntBASIC-1.68□□□□□ -2.68
DDX39AO00148 U4.4-201ENST00000620626 117 ntBASIC-1.68□□□□□ -2.68
DDX39AO00148 MIR6874-201ENST00000635894 71 ntBASIC-1.68□□□□□ -2.68
DDX39AO00148 MIR1246-201ENST00000636535 73 ntBASIC-1.68□□□□□ -2.68
DDX39AO00148 AC006160.2-201ENST00000637708 154 ntBASIC-1.68□□□□□ -2.68
DDX39AO00148 RNU6-380P-201ENST00000410207 107 ntBASIC-1.69□□□□□ -2.68
DDX39AO00148 MTND4LP1-201ENST00000446263 157 ntBASIC-1.69□□□□□ -2.68
DDX39AO00148 RNU6-1262P-201ENST00000516217 96 ntBASIC-1.69□□□□□ -2.68
DDX39AO00148 RNU6-844P-201ENST00000517175 102 ntBASIC-1.69□□□□□ -2.68
DDX39AO00148 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-1.7□□□□□ -2.68
DDX39AO00148 MIR889-201ENST00000401280 79 ntBASIC-1.7□□□□□ -2.68
DDX39AO00148 MIR548V-201ENST00000584165 80 ntBASIC-1.7□□□□□ -2.68
Retrieved 100 of 98,524 protein–RNA pairs in 233.9 ms