Protein–RNA interactions for Protein: A6NIU2

LINC01549, Putative uncharacterized protein encoded by LINC01549, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01549A6NIU2 AC009094.1-201ENST00000564443 426 ntBASIC-6.04□□□□□ -3.38
LINC01549A6NIU2 DLEU2_1.1-201ENST00000612089 120 ntBASIC-6.05□□□□□ -3.38
LINC01549A6NIU2 SNORD11.1-201ENST00000459482 85 ntBASIC-6.06□□□□□ -3.38
LINC01549A6NIU2 SNORA63-201ENST00000363450 132 ntBASIC-6.07□□□□□ -3.38
LINC01549A6NIU2 AL451105.1-201ENST00000450005 189 ntBASIC-6.07□□□□□ -3.38
LINC01549A6NIU2 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC-6.07□□□□□ -3.38
LINC01549A6NIU2 Y_RNA.29-201ENST00000362570 113 ntBASIC-6.08□□□□□ -3.38
LINC01549A6NIU2 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC-6.08□□□□□ -3.38
LINC01549A6NIU2 Y_RNA.89-201ENST00000363031 102 ntBASIC-6.09□□□□□ -3.38
LINC01549A6NIU2 MIR4679-2-201ENST00000578358 77 ntBASIC-6.09□□□□□ -3.38
LINC01549A6NIU2 RNU6-1042P-201ENST00000384204 107 ntBASIC-6.1□□□□□ -3.39
LINC01549A6NIU2 Y_RNA.96-201ENST00000363092 109 ntBASIC-6.11□□□□□ -3.39
LINC01549A6NIU2 RNU6-854P-201ENST00000364036 107 ntBASIC-6.11□□□□□ -3.39
LINC01549A6NIU2 RNU6-1124P-201ENST00000384169 107 ntBASIC-6.11□□□□□ -3.39
LINC01549A6NIU2 MIR656-201ENST00000385224 78 ntBASIC-6.11□□□□□ -3.39
LINC01549A6NIU2 RNU6-781P-201ENST00000516377 101 ntBASIC-6.11□□□□□ -3.39
LINC01549A6NIU2 Y_RNA.9-201ENST00000362354 101 ntBASIC-6.12□□□□□ -3.39
LINC01549A6NIU2 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC-6.12□□□□□ -3.39
LINC01549A6NIU2 MIR8053-201ENST00000613344 75 ntBASIC-6.12□□□□□ -3.39
LINC01549A6NIU2 Y_RNA.19-201ENST00000362462 99 ntBASIC-6.13□□□□□ -3.39
LINC01549A6NIU2 Y_RNA.43-201ENST00000362670 111 ntBASIC-6.13□□□□□ -3.39
LINC01549A6NIU2 SNORD113.1-201ENST00000363280 73 ntBASIC-6.13□□□□□ -3.39
LINC01549A6NIU2 AC074348.1-201ENST00000426503 132 ntBASIC-6.13□□□□□ -3.39
LINC01549A6NIU2 AC062037.1-201ENST00000605302 128 ntBASIC-6.13□□□□□ -3.39
LINC01549A6NIU2 RNU6-402P-201ENST00000410678 103 ntBASIC-6.14□□□□□ -3.39
LINC01549A6NIU2 AL035470.1-201ENST00000622571 220 ntBASIC-6.14□□□□□ -3.39
LINC01549A6NIU2 Y_RNA.292-201ENST00000364904 97 ntBASIC-6.15□□□□□ -3.39
LINC01549A6NIU2 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC-6.15□□□□□ -3.39
LINC01549A6NIU2 MIR1252-201ENST00000408861 65 ntBASIC-6.16□□□□□ -3.4
LINC01549A6NIU2 RNU6-1340P-201ENST00000384438 107 ntBASIC-6.17□□□□□ -3.4
LINC01549A6NIU2 MIR519C-201ENST00000385053 87 ntBASIC-6.17□□□□□ -3.4
LINC01549A6NIU2 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC-6.17□□□□□ -3.4
LINC01549A6NIU2 TMSB4XP3-201ENST00000445144 114 ntBASIC-6.17□□□□□ -3.4
LINC01549A6NIU2 RNU7-30P-201ENST00000516835 62 ntBASIC-6.17□□□□□ -3.4
LINC01549A6NIU2 Y_RNA.17-201ENST00000362433 111 ntBASIC-6.18□□□□□ -3.4
LINC01549A6NIU2 RNU6-915P-201ENST00000364943 103 ntBASIC-6.18□□□□□ -3.4
LINC01549A6NIU2 SNORA40B-201ENST00000385573 128 ntBASIC-6.18□□□□□ -3.4
LINC01549A6NIU2 SNORD127-201ENST00000458892 86 ntBASIC-6.18□□□□□ -3.4
LINC01549A6NIU2 AC139453.2-201ENST00000487255 133 ntBASIC-6.18□□□□□ -3.4
LINC01549A6NIU2 RNU6-231P-201ENST00000517122 103 ntBASIC-6.18□□□□□ -3.4
LINC01549A6NIU2 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC-6.19□□□□□ -3.4
LINC01549A6NIU2 RNU6-624P-201ENST00000363411 107 ntBASIC-6.2□□□□□ -3.4
LINC01549A6NIU2 RNU6-806P-201ENST00000365147 105 ntBASIC-6.2□□□□□ -3.4
LINC01549A6NIU2 MIR124-1-201ENST00000385275 85 ntBASIC-6.2□□□□□ -3.4
LINC01549A6NIU2 SNORD116.2-201ENST00000391251 93 ntBASIC-6.2□□□□□ -3.4
LINC01549A6NIU2 MTND5P22-201ENST00000458380 195 ntBASIC-6.2□□□□□ -3.4
LINC01549A6NIU2 MIR5009-201ENST00000578736 100 ntBASIC-6.2□□□□□ -3.4
LINC01549A6NIU2 RNU4-40P-201ENST00000364351 143 ntBASIC-6.21□□□□□ -3.4
LINC01549A6NIU2 RNU6-1143P-201ENST00000516125 104 ntBASIC-6.21□□□□□ -3.4
LINC01549A6NIU2 DNAJC19P2-201ENST00000593340 302 ntBASIC-6.21□□□□□ -3.4
LINC01549A6NIU2 RNY4P14-201ENST00000363656 96 ntBASIC-6.22□□□□□ -3.41
LINC01549A6NIU2 Y_RNA.240-201ENST00000364469 95 ntBASIC-6.22□□□□□ -3.41
LINC01549A6NIU2 Y_RNA.718-201ENST00000517110 102 ntBASIC-6.22□□□□□ -3.41
LINC01549A6NIU2 Y_RNA.259-201ENST00000364619 101 ntBASIC-6.24□□□□□ -3.41
LINC01549A6NIU2 Y_RNA.276-201ENST00000364732 109 ntBASIC-6.24□□□□□ -3.41
LINC01549A6NIU2 Y_RNA.382-201ENST00000365672 114 ntBASIC-6.24□□□□□ -3.41
LINC01549A6NIU2 Y_RNA.26-201ENST00000362539 101 ntBASIC-6.25□□□□□ -3.41
LINC01549A6NIU2 AL158147.1-201ENST00000443970 75 ntBASIC-6.25□□□□□ -3.41
LINC01549A6NIU2 RNU7-121P-201ENST00000516604 62 ntBASIC-6.25□□□□□ -3.41
LINC01549A6NIU2 RNU6-239P-201ENST00000390990 99 ntBASIC-6.26□□□□□ -3.41
LINC01549A6NIU2 DEFB108C-201ENST00000400154 252 ntBASIC-6.26□□□□□ -3.41
LINC01549A6NIU2 RNU6-823P-201ENST00000391042 103 ntBASIC-6.27□□□□□ -3.41
LINC01549A6NIU2 MIR1302-6-201ENST00000408466 90 ntBASIC-6.27□□□□□ -3.41
LINC01549A6NIU2 RNU6-557P-201ENST00000516842 110 ntBASIC-6.27□□□□□ -3.41
LINC01549A6NIU2 RNU6-92P-201ENST00000605893 104 ntBASIC-6.27□□□□□ -3.41
LINC01549A6NIU2 RNU6-742P-201ENST00000365289 107 ntBASIC-6.28□□□□□ -3.41
LINC01549A6NIU2 Y_RNA.573-201ENST00000384763 105 ntBASIC-6.28□□□□□ -3.41
LINC01549A6NIU2 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC-6.28□□□□□ -3.41
LINC01549A6NIU2 SNORA63.4-201ENST00000362763 126 ntBASIC-6.29□□□□□ -3.42
LINC01549A6NIU2 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-6.29□□□□□ -3.42
LINC01549A6NIU2 RNU6-876P-201ENST00000391295 104 ntBASIC-6.29□□□□□ -3.42
LINC01549A6NIU2 MIR3611-201ENST00000584484 83 ntBASIC-6.29□□□□□ -3.42
LINC01549A6NIU2 MIR548AH-201ENST00000637109 76 ntBASIC-6.29□□□□□ -3.42
LINC01549A6NIU2 Y_RNA.553-201ENST00000384670 102 ntBASIC-6.31□□□□□ -3.42
LINC01549A6NIU2 Y_RNA.187-201ENST00000363918 113 ntBASIC-6.32□□□□□ -3.42
LINC01549A6NIU2 RNA5SP224-201ENST00000365069 126 ntBASIC-6.32□□□□□ -3.42
LINC01549A6NIU2 RNU6-460P-201ENST00000391158 108 ntBASIC-6.32□□□□□ -3.42
LINC01549A6NIU2 SCARNA23-201ENST00000516060 130 ntBASIC-6.32□□□□□ -3.42
LINC01549A6NIU2 AC113139.1-201ENST00000605049 239 ntBASIC-6.32□□□□□ -3.42
LINC01549A6NIU2 MTND4LP32-201ENST00000636111 270 ntBASIC-6.32□□□□□ -3.42
LINC01549A6NIU2 Y_RNA.260-201ENST00000364628 101 ntBASIC-6.33□□□□□ -3.42
LINC01549A6NIU2 RNU6-450P-201ENST00000364654 107 ntBASIC-6.33□□□□□ -3.42
LINC01549A6NIU2 SNORD45C-201ENST00000383893 79 ntBASIC-6.33□□□□□ -3.42
LINC01549A6NIU2 SNORD45A-201ENST00000384512 84 ntBASIC-6.33□□□□□ -3.42
LINC01549A6NIU2 SNORD116-29-201ENST00000384516 83 ntBASIC-6.33□□□□□ -3.42
LINC01549A6NIU2 RNU7-197P-201ENST00000458836 62 ntBASIC-6.33□□□□□ -3.42
LINC01549A6NIU2 MIR4643-201ENST00000577473 78 ntBASIC-6.33□□□□□ -3.42
LINC01549A6NIU2 RNU6-686P-201ENST00000364839 107 ntBASIC-6.35□□□□□ -3.43
LINC01549A6NIU2 SNORD58C-201ENST00000365223 64 ntBASIC-6.35□□□□□ -3.43
LINC01549A6NIU2 Y_RNA.645-201ENST00000391229 102 ntBASIC-6.36□□□□□ -3.43
LINC01549A6NIU2 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC-6.36□□□□□ -3.43
LINC01549A6NIU2 RNU7-152P-201ENST00000458982 64 ntBASIC-6.37□□□□□ -3.43
LINC01549A6NIU2 RNU6-1325P-201ENST00000364905 105 ntBASIC-6.38□□□□□ -3.43
LINC01549A6NIU2 MIR1297-201ENST00000637311 77 ntBASIC-6.38□□□□□ -3.43
LINC01549A6NIU2 SNORD60.1-201ENST00000362451 73 ntBASIC-6.39□□□□□ -3.43
LINC01549A6NIU2 Y_RNA.532-201ENST00000384590 113 ntBASIC-6.39□□□□□ -3.43
LINC01549A6NIU2 RNU6-314P-201ENST00000516574 104 ntBASIC-6.39□□□□□ -3.43
LINC01549A6NIU2 SNORA40.16-201ENST00000517238 121 ntBASIC-6.39□□□□□ -3.43
LINC01549A6NIU2 AC006362.1-201ENST00000567392 174 ntBASIC-6.39□□□□□ -3.43
LINC01549A6NIU2 Y_RNA.206-201ENST00000364136 102 ntBASIC-6.4□□□□□ -3.43
Retrieved 100 of 98,524 protein–RNA pairs in 237.9 ms