Protein–RNA interactions for Protein: Q9Y261

FOXA2, Hepatocyte nuclear factor 3-beta, humanhuman

Predicted RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA2Q9Y261 SNORD115-27-201ENST00000364430 82 ntBASIC-0.82□□□□□ -2.54
FOXA2Q9Y261 Y_RNA.290-201ENST00000364879 114 ntBASIC-0.82□□□□□ -2.54
FOXA2Q9Y261 RNU6-24P-201ENST00000384440 107 ntBASIC-0.82□□□□□ -2.54
FOXA2Q9Y261 MIR519C-201ENST00000385053 87 ntBASIC-0.82□□□□□ -2.54
FOXA2Q9Y261 RNU6-1154P-201ENST00000391001 104 ntBASIC-0.82□□□□□ -2.54
FOXA2Q9Y261 MIR1255B2-201ENST00000408618 67 ntBASIC-0.82□□□□□ -2.54
FOXA2Q9Y261 Y_RNA.610-201ENST00000410681 103 ntBASIC-0.82□□□□□ -2.54
FOXA2Q9Y261 Y_RNA.709-201ENST00000516952 92 ntBASIC-0.82□□□□□ -2.54
FOXA2Q9Y261 CYP3A54P-201ENST00000566950 75 ntBASIC-0.82□□□□□ -2.54
FOXA2Q9Y261 MIR4306-201ENST00000583390 91 ntBASIC-0.82□□□□□ -2.54
FOXA2Q9Y261 RNU6-1290P-201ENST00000362957 109 ntBASIC-0.83□□□□□ -2.54
FOXA2Q9Y261 RNU6-479P-201ENST00000516348 105 ntBASIC-0.83□□□□□ -2.54
FOXA2Q9Y261 RNU6-752P-201ENST00000516376 102 ntBASIC-0.83□□□□□ -2.54
FOXA2Q9Y261 MIR4464-201ENST00000580818 92 ntBASIC-0.83□□□□□ -2.54
FOXA2Q9Y261 MIR2052-201ENST00000636055 55 ntBASIC-0.83□□□□□ -2.54
FOXA2Q9Y261 RNU6-340P-201ENST00000364005 107 ntBASIC-0.84□□□□□ -2.54
FOXA2Q9Y261 SNORD114-15-201ENST00000364687 72 ntBASIC-0.84□□□□□ -2.54
FOXA2Q9Y261 RNU6-10P-201ENST00000384036 107 ntBASIC-0.84□□□□□ -2.54
FOXA2Q9Y261 MIR521-2-201ENST00000384818 87 ntBASIC-0.84□□□□□ -2.54
FOXA2Q9Y261 RNU2-51P-201ENST00000410708 197 ntBASIC-0.84□□□□□ -2.54
FOXA2Q9Y261 RNU6-681P-201ENST00000364012 104 ntBASIC-0.85□□□□□ -2.55
FOXA2Q9Y261 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC-0.85□□□□□ -2.55
FOXA2Q9Y261 AL031737.1-201ENST00000450125 223 ntBASIC-0.85□□□□□ -2.55
FOXA2Q9Y261 RNU6-313P-201ENST00000516317 112 ntBASIC-0.85□□□□□ -2.55
FOXA2Q9Y261 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC-0.85□□□□□ -2.55
FOXA2Q9Y261 SNORD114-17-201ENST00000364699 75 ntBASIC-0.86□□□□□ -2.55
FOXA2Q9Y261 SNORD77.2-201ENST00000391045 68 ntBASIC-0.86□□□□□ -2.55
FOXA2Q9Y261 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-0.86□□□□□ -2.55
FOXA2Q9Y261 AL445584.3-201ENST00000617173 78 ntBASIC-0.86□□□□□ -2.55
FOXA2Q9Y261 MIR6888-201ENST00000621977 67 ntBASIC-0.86□□□□□ -2.55
FOXA2Q9Y261 MIR6739-201ENST00000622461 75 ntBASIC-0.86□□□□□ -2.55
FOXA2Q9Y261 RNU6-633P-201ENST00000362612 103 ntBASIC-0.87□□□□□ -2.55
FOXA2Q9Y261 RNU6-1246P-201ENST00000391064 107 ntBASIC-0.87□□□□□ -2.55
FOXA2Q9Y261 RNY1P9-201ENST00000532431 109 ntBASIC-0.87□□□□□ -2.55
FOXA2Q9Y261 AC132825.6-201ENST00000638861 357 ntBASIC-0.87□□□□□ -2.55
FOXA2Q9Y261 MIR450A1-201ENST00000362262 91 ntBASIC-0.88□□□□□ -2.55
FOXA2Q9Y261 SNORD115-37-201ENST00000363768 82 ntBASIC-0.88□□□□□ -2.55
FOXA2Q9Y261 RNA5SP192-201ENST00000364404 120 ntBASIC-0.88□□□□□ -2.55
FOXA2Q9Y261 snoU13.19-201ENST00000459148 104 ntBASIC-0.88□□□□□ -2.55
FOXA2Q9Y261 MIR4668-201ENST00000582284 70 ntBASIC-0.88□□□□□ -2.55
FOXA2Q9Y261 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-0.88□□□□□ -2.55
FOXA2Q9Y261 Y_RNA.264-201ENST00000364665 102 ntBASIC-0.89□□□□□ -2.55
FOXA2Q9Y261 Y_RNA.273-201ENST00000364703 102 ntBASIC-0.89□□□□□ -2.55
FOXA2Q9Y261 RNU6-30P-201ENST00000384561 107 ntBASIC-0.89□□□□□ -2.55
FOXA2Q9Y261 MIR889-201ENST00000401280 79 ntBASIC-0.89□□□□□ -2.55
FOXA2Q9Y261 MIR3910-1-201ENST00000580936 111 ntBASIC-0.89□□□□□ -2.55
FOXA2Q9Y261 RNU6-226P-201ENST00000363778 107 ntBASIC-0.9□□□□□ -2.55
FOXA2Q9Y261 Y_RNA.178-201ENST00000363832 102 ntBASIC-0.9□□□□□ -2.55
FOXA2Q9Y261 Y_RNA.244-201ENST00000364484 109 ntBASIC-0.9□□□□□ -2.55
FOXA2Q9Y261 RNA5SP461-201ENST00000516451 104 ntBASIC-0.9□□□□□ -2.55
FOXA2Q9Y261 MIR548AX-201ENST00000580117 73 ntBASIC-0.9□□□□□ -2.55
FOXA2Q9Y261 AP001318.4-201ENST00000616637 121 ntBASIC-0.9□□□□□ -2.55
FOXA2Q9Y261 RNU6-924P-201ENST00000362926 108 ntBASIC-0.91□□□□□ -2.56
FOXA2Q9Y261 RNY4P18-201ENST00000391107 89 ntBASIC-0.91□□□□□ -2.56
FOXA2Q9Y261 AL035461.1-201ENST00000421490 332 ntBASIC-0.91□□□□□ -2.56
FOXA2Q9Y261 RNU7-154P-201ENST00000516194 62 ntBASIC-0.91□□□□□ -2.56
FOXA2Q9Y261 RNU6-1108P-201ENST00000516308 104 ntBASIC-0.91□□□□□ -2.56
FOXA2Q9Y261 RNU6-624P-201ENST00000363411 107 ntBASIC-0.92□□□□□ -2.56
FOXA2Q9Y261 SNORD116-22-201ENST00000384430 92 ntBASIC-0.92□□□□□ -2.56
FOXA2Q9Y261 MIR519A2-201ENST00000384990 87 ntBASIC-0.92□□□□□ -2.56
FOXA2Q9Y261 AC093729.1-201ENST00000513074 128 ntBASIC-0.92□□□□□ -2.56
FOXA2Q9Y261 SNORA40.13-201ENST00000516379 120 ntBASIC-0.92□□□□□ -2.56
FOXA2Q9Y261 RNU6-1325P-201ENST00000364905 105 ntBASIC-0.93□□□□□ -2.56
FOXA2Q9Y261 MIR587-201ENST00000384845 96 ntBASIC-0.93□□□□□ -2.56
FOXA2Q9Y261 Y_RNA.620-201ENST00000411009 88 ntBASIC-0.93□□□□□ -2.56
FOXA2Q9Y261 Y_RNA.698-201ENST00000516798 118 ntBASIC-0.93□□□□□ -2.56
FOXA2Q9Y261 snoU83B.1-201ENST00000517136 88 ntBASIC-0.93□□□□□ -2.56
FOXA2Q9Y261 RNA5SP26-201ENST00000362406 119 ntBASIC-0.94□□□□□ -2.56
FOXA2Q9Y261 RNU6-518P-201ENST00000516056 96 ntBASIC-0.94□□□□□ -2.56
FOXA2Q9Y261 MALAT1.1-201ENST00000618249 95 ntBASIC-0.94□□□□□ -2.56
FOXA2Q9Y261 MIR6818-201ENST00000621576 65 ntBASIC-0.94□□□□□ -2.56
FOXA2Q9Y261 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-0.94□□□□□ -2.56
FOXA2Q9Y261 SNORD113-1-201ENST00000365321 69 ntBASIC-0.95□□□□□ -2.56
FOXA2Q9Y261 AL021921.1-201ENST00000442774 93 ntBASIC-0.95□□□□□ -2.56
FOXA2Q9Y261 SNORD63.1-201ENST00000516178 80 ntBASIC-0.95□□□□□ -2.56
FOXA2Q9Y261 RNU6-656P-201ENST00000516785 107 ntBASIC-0.95□□□□□ -2.56
FOXA2Q9Y261 RNU6-706P-201ENST00000517229 104 ntBASIC-0.95□□□□□ -2.56
FOXA2Q9Y261 MIR6502-201ENST00000617296 76 ntBASIC-0.95□□□□□ -2.56
FOXA2Q9Y261 SNORD115-22-201ENST00000364456 82 ntBASIC-0.96□□□□□ -2.56
FOXA2Q9Y261 RNU6-219P-201ENST00000364728 107 ntBASIC-0.96□□□□□ -2.56
FOXA2Q9Y261 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC-0.96□□□□□ -2.56
FOXA2Q9Y261 RNU6-755P-201ENST00000364400 103 ntBASIC-0.97□□□□□ -2.56
FOXA2Q9Y261 Y_RNA.495-201ENST00000384435 112 ntBASIC-0.97□□□□□ -2.56
FOXA2Q9Y261 RNU6-402P-201ENST00000410678 103 ntBASIC-0.97□□□□□ -2.56
FOXA2Q9Y261 RNA5SP476-201ENST00000516613 103 ntBASIC-0.97□□□□□ -2.56
FOXA2Q9Y261 MIR5591-201ENST00000578248 65 ntBASIC-0.97□□□□□ -2.56
FOXA2Q9Y261 AC091912.2-201ENST00000624798 167 ntBASIC-0.97□□□□□ -2.56
FOXA2Q9Y261 MIR6874-201ENST00000635894 71 ntBASIC-0.97□□□□□ -2.56
FOXA2Q9Y261 MIR29B1-201ENST00000385015 81 ntBASIC-0.98□□□□□ -2.57
FOXA2Q9Y261 Y_RNA.629-201ENST00000411368 105 ntBASIC-0.98□□□□□ -2.57
FOXA2Q9Y261 SNORD57-201ENST00000448188 72 ntBASIC-0.98□□□□□ -2.57
FOXA2Q9Y261 RNA5SP67-201ENST00000516422 131 ntBASIC-0.98□□□□□ -2.57
FOXA2Q9Y261 RNU6-267P-201ENST00000516714 103 ntBASIC-0.98□□□□□ -2.57
FOXA2Q9Y261 RNU6-557P-201ENST00000516842 110 ntBASIC-0.98□□□□□ -2.57
FOXA2Q9Y261 AP002795.1-201ENST00000534879 84 ntBASIC-0.98□□□□□ -2.57
FOXA2Q9Y261 MIR3165-201ENST00000579874 75 ntBASIC-0.98□□□□□ -2.57
FOXA2Q9Y261 MIR548BB-201ENST00000626714 66 ntBASIC-0.98□□□□□ -2.57
FOXA2Q9Y261 RNU6-497P-201ENST00000365316 104 ntBASIC-0.99□□□□□ -2.57
FOXA2Q9Y261 Y_RNA.348-201ENST00000365403 103 ntBASIC-0.99□□□□□ -2.57
FOXA2Q9Y261 Y_RNA.514-201ENST00000384528 112 ntBASIC-0.99□□□□□ -2.57
Retrieved 100 of 98,524 protein–RNA pairs in 181.4 ms