Protein–RNA interactions for Protein: Q9XRX5

HHLA3, HERV-H LTR-associating protein 3, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA3Q9XRX5 SNORA63-201ENST00000363450 132 ntBASIC-1.77□□□□□ -2.69
HHLA3Q9XRX5 Y_RNA.489-201ENST00000384410 101 ntBASIC-1.77□□□□□ -2.69
HHLA3Q9XRX5 RNU6-540P-201ENST00000384622 101 ntBASIC-1.77□□□□□ -2.69
HHLA3Q9XRX5 MIR1468-201ENST00000410600 86 ntBASIC-1.77□□□□□ -2.69
HHLA3Q9XRX5 Y_RNA.609-201ENST00000410669 89 ntBASIC-1.77□□□□□ -2.69
HHLA3Q9XRX5 AC004792.1-201ENST00000614523 137 ntBASIC-1.77□□□□□ -2.69
HHLA3Q9XRX5 SNORD18.1-201ENST00000363807 70 ntBASIC-1.78□□□□□ -2.69
HHLA3Q9XRX5 RNU6-340P-201ENST00000364005 107 ntBASIC-1.78□□□□□ -2.69
HHLA3Q9XRX5 SNORD115-27-201ENST00000364430 82 ntBASIC-1.78□□□□□ -2.69
HHLA3Q9XRX5 Y_RNA.426-201ENST00000384068 113 ntBASIC-1.78□□□□□ -2.69
HHLA3Q9XRX5 Y_RNA.442-201ENST00000384131 102 ntBASIC-1.78□□□□□ -2.69
HHLA3Q9XRX5 RNU6-400P-201ENST00000391173 106 ntBASIC-1.78□□□□□ -2.69
HHLA3Q9XRX5 MIR1236-201ENST00000408340 102 ntBASIC-1.78□□□□□ -2.69
HHLA3Q9XRX5 AL450471.1-201ENST00000447509 127 ntBASIC-1.78□□□□□ -2.69
HHLA3Q9XRX5 SCARNA23-201ENST00000516060 130 ntBASIC-1.78□□□□□ -2.69
HHLA3Q9XRX5 MTND5P41-201ENST00000517498 206 ntBASIC-1.78□□□□□ -2.69
HHLA3Q9XRX5 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC-1.78□□□□□ -2.69
HHLA3Q9XRX5 RNU6-79P-201ENST00000362511 107 ntBASIC-1.79□□□□□ -2.7
HHLA3Q9XRX5 MIR548Q-201ENST00000408404 100 ntBASIC-1.79□□□□□ -2.7
HHLA3Q9XRX5 AC018880.2-201ENST00000414265 201 ntBASIC-1.79□□□□□ -2.7
HHLA3Q9XRX5 SNORD33.1-201ENST00000516213 88 ntBASIC-1.79□□□□□ -2.7
HHLA3Q9XRX5 RNU7-153P-201ENST00000516455 62 ntBASIC-1.79□□□□□ -2.7
HHLA3Q9XRX5 SNORD116-10-201ENST00000363791 102 ntBASIC-1.8□□□□□ -2.7
HHLA3Q9XRX5 RNU6-574P-201ENST00000384265 107 ntBASIC-1.8□□□□□ -2.7
HHLA3Q9XRX5 MIR487B-201ENST00000385021 84 ntBASIC-1.8□□□□□ -2.7
HHLA3Q9XRX5 AL035461.1-201ENST00000421490 332 ntBASIC-1.8□□□□□ -2.7
HHLA3Q9XRX5 RNU6-807P-201ENST00000516805 107 ntBASIC-1.8□□□□□ -2.7
HHLA3Q9XRX5 MIR3914-2-201ENST00000637339 95 ntBASIC-1.8□□□□□ -2.7
HHLA3Q9XRX5 RNU6-478P-201ENST00000363904 110 ntBASIC-1.81□□□□□ -2.7
HHLA3Q9XRX5 Y_RNA.223-201ENST00000364290 113 ntBASIC-1.81□□□□□ -2.7
HHLA3Q9XRX5 RNU6-983P-201ENST00000516004 103 ntBASIC-1.81□□□□□ -2.7
HHLA3Q9XRX5 RNU6-904P-201ENST00000516206 101 ntBASIC-1.81□□□□□ -2.7
HHLA3Q9XRX5 RNU6-537P-201ENST00000517277 103 ntBASIC-1.81□□□□□ -2.7
HHLA3Q9XRX5 Y_RNA.281-201ENST00000364774 94 ntBASIC-1.82□□□□□ -2.7
HHLA3Q9XRX5 Y_RNA.603-201ENST00000410571 108 ntBASIC-1.82□□□□□ -2.7
HHLA3Q9XRX5 RNU6-1211P-201ENST00000459179 105 ntBASIC-1.82□□□□□ -2.7
HHLA3Q9XRX5 RNU6-327P-201ENST00000516270 127 ntBASIC-1.82□□□□□ -2.7
HHLA3Q9XRX5 Y_RNA.96-201ENST00000363092 109 ntBASIC-1.83□□□□□ -2.7
HHLA3Q9XRX5 RNU6-681P-201ENST00000364012 104 ntBASIC-1.83□□□□□ -2.7
HHLA3Q9XRX5 Y_RNA.340-201ENST00000365330 92 ntBASIC-1.83□□□□□ -2.7
HHLA3Q9XRX5 RNU6-196P-201ENST00000384315 107 ntBASIC-1.83□□□□□ -2.7
HHLA3Q9XRX5 MIR548A3-201ENST00000385297 97 ntBASIC-1.83□□□□□ -2.7
HHLA3Q9XRX5 SNORA40-201ENST00000388090 126 ntBASIC-1.83□□□□□ -2.7
HHLA3Q9XRX5 Y_RNA.604-201ENST00000410574 102 ntBASIC-1.83□□□□□ -2.7
HHLA3Q9XRX5 MIR1285-2-201ENST00000408311 88 ntBASIC-1.84□□□□□ -2.7
HHLA3Q9XRX5 RNU6-257P-201ENST00000410238 98 ntBASIC-1.84□□□□□ -2.7
HHLA3Q9XRX5 Y_RNA.712-201ENST00000517011 92 ntBASIC-1.84□□□□□ -2.7
HHLA3Q9XRX5 RNU6-228P-201ENST00000362700 106 ntBASIC-1.85□□□□□ -2.71
HHLA3Q9XRX5 Y_RNA.103-201ENST00000363171 102 ntBASIC-1.85□□□□□ -2.71
HHLA3Q9XRX5 Y_RNA.175-201ENST00000363794 111 ntBASIC-1.85□□□□□ -2.71
HHLA3Q9XRX5 RNU6-379P-201ENST00000363813 104 ntBASIC-1.85□□□□□ -2.71
HHLA3Q9XRX5 Y_RNA.181-201ENST00000363872 101 ntBASIC-1.85□□□□□ -2.71
HHLA3Q9XRX5 Y_RNA.236-201ENST00000364427 111 ntBASIC-1.85□□□□□ -2.71
HHLA3Q9XRX5 RNU6-645P-201ENST00000364649 106 ntBASIC-1.86□□□□□ -2.71
HHLA3Q9XRX5 RNU6-458P-201ENST00000384179 107 ntBASIC-1.86□□□□□ -2.71
HHLA3Q9XRX5 RNU6ATAC23P-201ENST00000408448 123 ntBASIC-1.86□□□□□ -2.71
HHLA3Q9XRX5 RNU7-61P-201ENST00000515897 61 ntBASIC-1.86□□□□□ -2.71
HHLA3Q9XRX5 AP001094.1-201ENST00000579805 193 ntBASIC-1.86□□□□□ -2.71
HHLA3Q9XRX5 U6.58-201ENST00000613107 107 ntBASIC-1.86□□□□□ -2.71
HHLA3Q9XRX5 MIR365A-201ENST00000362260 87 ntBASIC-1.87□□□□□ -2.71
HHLA3Q9XRX5 MIR548C-201ENST00000384815 97 ntBASIC-1.87□□□□□ -2.71
HHLA3Q9XRX5 SNORD77.2-201ENST00000391045 68 ntBASIC-1.87□□□□□ -2.71
HHLA3Q9XRX5 RNU6-1107P-201ENST00000364817 104 ntBASIC-1.88□□□□□ -2.71
HHLA3Q9XRX5 AC108019.1-201ENST00000512540 175 ntBASIC-1.88□□□□□ -2.71
HHLA3Q9XRX5 RNU6-971P-201ENST00000516920 106 ntBASIC-1.88□□□□□ -2.71
HHLA3Q9XRX5 U6.95-201ENST00000636931 70 ntBASIC-1.88□□□□□ -2.71
HHLA3Q9XRX5 Y_RNA.502-201ENST00000384478 113 ntBASIC-1.89□□□□□ -2.71
HHLA3Q9XRX5 RNU6-696P-201ENST00000390834 107 ntBASIC-1.89□□□□□ -2.71
HHLA3Q9XRX5 RNU6-388P-201ENST00000517012 105 ntBASIC-1.89□□□□□ -2.71
HHLA3Q9XRX5 RNU6-389P-201ENST00000517048 105 ntBASIC-1.89□□□□□ -2.71
HHLA3Q9XRX5 Y_RNA.190-201ENST00000363964 101 ntBASIC-1.9□□□□□ -2.71
HHLA3Q9XRX5 RNU6-608P-201ENST00000383927 104 ntBASIC-1.9□□□□□ -2.71
HHLA3Q9XRX5 Y_RNA.413-201ENST00000384007 102 ntBASIC-1.9□□□□□ -2.71
HHLA3Q9XRX5 Y_RNA.754-201ENST00000476024 102 ntBASIC-1.9□□□□□ -2.71
HHLA3Q9XRX5 RNU6-1262P-201ENST00000516217 96 ntBASIC-1.9□□□□□ -2.71
HHLA3Q9XRX5 RNU6-162P-201ENST00000516228 103 ntBASIC-1.9□□□□□ -2.71
HHLA3Q9XRX5 RNU7-174P-201ENST00000516248 59 ntBASIC-1.9□□□□□ -2.71
HHLA3Q9XRX5 AL353621.2-201ENST00000605340 133 ntBASIC-1.9□□□□□ -2.71
HHLA3Q9XRX5 Y_RNA.790-201ENST00000614282 102 ntBASIC-1.9□□□□□ -2.71
HHLA3Q9XRX5 Y_RNA.782-201ENST00000614695 102 ntBASIC-1.9□□□□□ -2.71
HHLA3Q9XRX5 Y_RNA.74-201ENST00000362911 99 ntBASIC-1.91□□□□□ -2.72
HHLA3Q9XRX5 Y_RNA.543-201ENST00000384649 107 ntBASIC-1.91□□□□□ -2.72
HHLA3Q9XRX5 RNU6-695P-201ENST00000391157 104 ntBASIC-1.91□□□□□ -2.72
HHLA3Q9XRX5 RNU6-630P-201ENST00000391258 106 ntBASIC-1.91□□□□□ -2.72
HHLA3Q9XRX5 MIR4441-201ENST00000582623 100 ntBASIC-1.91□□□□□ -2.72
HHLA3Q9XRX5 RNU6-880P-201ENST00000384526 107 ntBASIC-1.92□□□□□ -2.72
HHLA3Q9XRX5 MIR590-201ENST00000385008 97 ntBASIC-1.92□□□□□ -2.72
HHLA3Q9XRX5 RNU6-1108P-201ENST00000516308 104 ntBASIC-1.92□□□□□ -2.72
HHLA3Q9XRX5 RNU6-1045P-201ENST00000516321 107 ntBASIC-1.92□□□□□ -2.72
HHLA3Q9XRX5 RNU6-158P-201ENST00000517104 100 ntBASIC-1.92□□□□□ -2.72
HHLA3Q9XRX5 MIR4756-201ENST00000577874 78 ntBASIC-1.92□□□□□ -2.72
HHLA3Q9XRX5 U7.3-201ENST00000616123 62 ntBASIC-1.92□□□□□ -2.72
HHLA3Q9XRX5 RNU6-659P-201ENST00000516454 104 ntBASIC-1.93□□□□□ -2.72
HHLA3Q9XRX5 Y_RNA.109-201ENST00000363215 102 ntBASIC-1.94□□□□□ -2.72
HHLA3Q9XRX5 Y_RNA.264-201ENST00000364665 102 ntBASIC-1.94□□□□□ -2.72
HHLA3Q9XRX5 Y_RNA.282-201ENST00000364793 102 ntBASIC-1.94□□□□□ -2.72
HHLA3Q9XRX5 Y_RNA.343-201ENST00000365354 112 ntBASIC-1.94□□□□□ -2.72
HHLA3Q9XRX5 MIR520D-201ENST00000385002 87 ntBASIC-1.94□□□□□ -2.72
HHLA3Q9XRX5 MIR519C-201ENST00000385053 87 ntBASIC-1.94□□□□□ -2.72
HHLA3Q9XRX5 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC-1.94□□□□□ -2.72
Retrieved 100 of 98,524 protein–RNA pairs in 220.3 ms