Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 AC099654.10-201ENST00000640395 161 ntBASIC-0.71□□□□□ -2.52
CCDC88CQ9P219 MIR365A-201ENST00000362260 87 ntBASIC-0.72□□□□□ -2.52
CCDC88CQ9P219 SNORA2.1-201ENST00000363089 137 ntBASIC-0.72□□□□□ -2.52
CCDC88CQ9P219 SNORA19-201ENST00000384737 128 ntBASIC-0.72□□□□□ -2.52
CCDC88CQ9P219 MIR587-201ENST00000384845 96 ntBASIC-0.72□□□□□ -2.52
CCDC88CQ9P219 MIR590-201ENST00000385008 97 ntBASIC-0.72□□□□□ -2.52
CCDC88CQ9P219 MIR527-201ENST00000385244 85 ntBASIC-0.72□□□□□ -2.52
CCDC88CQ9P219 Y_RNA.609-201ENST00000410669 89 ntBASIC-0.72□□□□□ -2.52
CCDC88CQ9P219 SNORD63.1-201ENST00000516178 80 ntBASIC-0.72□□□□□ -2.52
CCDC88CQ9P219 RNU6-1262P-201ENST00000516217 96 ntBASIC-0.72□□□□□ -2.52
CCDC88CQ9P219 RNU6-659P-201ENST00000516454 104 ntBASIC-0.72□□□□□ -2.52
CCDC88CQ9P219 RNU6-706P-201ENST00000517229 104 ntBASIC-0.72□□□□□ -2.52
CCDC88CQ9P219 U7.3-201ENST00000616123 62 ntBASIC-0.72□□□□□ -2.52
CCDC88CQ9P219 MIR6818-201ENST00000621576 65 ntBASIC-0.72□□□□□ -2.52
CCDC88CQ9P219 MIR3914-2-201ENST00000637339 95 ntBASIC-0.72□□□□□ -2.52
CCDC88CQ9P219 SNORD19-201ENST00000391191 68 ntBASIC-0.72□□□□□ -2.53
CCDC88CQ9P219 RNU6-255P-201ENST00000516957 105 ntBASIC-0.72□□□□□ -2.53
CCDC88CQ9P219 AC138207.3-201ENST00000585289 166 ntBASIC-0.72□□□□□ -2.53
CCDC88CQ9P219 AC104996.3-201ENST00000590718 94 ntBASIC-0.72□□□□□ -2.53
CCDC88CQ9P219 Y_RNA.96-201ENST00000363092 109 ntBASIC-0.73□□□□□ -2.53
CCDC88CQ9P219 RNU6-746P-201ENST00000384112 109 ntBASIC-0.73□□□□□ -2.53
CCDC88CQ9P219 MTATP8P2-201ENST00000435212 202 ntBASIC-0.73□□□□□ -2.53
CCDC88CQ9P219 RNU6-904P-201ENST00000516206 101 ntBASIC-0.73□□□□□ -2.53
CCDC88CQ9P219 RNA5SP470-201ENST00000516463 106 ntBASIC-0.73□□□□□ -2.53
CCDC88CQ9P219 SNORD115-37-201ENST00000363768 82 ntBASIC-0.74□□□□□ -2.53
CCDC88CQ9P219 MIR147A-201ENST00000385079 72 ntBASIC-0.74□□□□□ -2.53
CCDC88CQ9P219 RNU6-1089P-201ENST00000516473 104 ntBASIC-0.74□□□□□ -2.53
CCDC88CQ9P219 U4.4-201ENST00000620626 117 ntBASIC-0.74□□□□□ -2.53
CCDC88CQ9P219 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC-0.74□□□□□ -2.53
CCDC88CQ9P219 Y_RNA.348-201ENST00000365403 103 ntBASIC-0.74□□□□□ -2.53
CCDC88CQ9P219 RNU6-162P-201ENST00000516228 103 ntBASIC-0.74□□□□□ -2.53
CCDC88CQ9P219 RNU6-794P-201ENST00000517261 64 ntBASIC-0.74□□□□□ -2.53
CCDC88CQ9P219 Y_RNA.818-201ENST00000618813 71 ntBASIC-0.74□□□□□ -2.53
CCDC88CQ9P219 MIR2052-201ENST00000636055 55 ntBASIC-0.74□□□□□ -2.53
CCDC88CQ9P219 SNORD115-33-201ENST00000363723 82 ntBASIC-0.75□□□□□ -2.53
CCDC88CQ9P219 RNU6-1325P-201ENST00000364905 105 ntBASIC-0.75□□□□□ -2.53
CCDC88CQ9P219 RNU6-246P-201ENST00000384702 107 ntBASIC-0.75□□□□□ -2.53
CCDC88CQ9P219 RNU6-554P-201ENST00000410466 106 ntBASIC-0.75□□□□□ -2.53
CCDC88CQ9P219 MIR548AG1-201ENST00000579932 66 ntBASIC-0.75□□□□□ -2.53
CCDC88CQ9P219 AC006160.2-201ENST00000637708 154 ntBASIC-0.75□□□□□ -2.53
CCDC88CQ9P219 MIR630-201ENST00000384957 97 ntBASIC-0.76□□□□□ -2.53
CCDC88CQ9P219 MIR889-201ENST00000401280 79 ntBASIC-0.76□□□□□ -2.53
CCDC88CQ9P219 AL353691.2-201ENST00000443795 59 ntBASIC-0.76□□□□□ -2.53
CCDC88CQ9P219 Y_RNA.712-201ENST00000517011 92 ntBASIC-0.76□□□□□ -2.53
CCDC88CQ9P219 MIR3115-201ENST00000577915 68 ntBASIC-0.76□□□□□ -2.53
CCDC88CQ9P219 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-0.76□□□□□ -2.53
CCDC88CQ9P219 RNU6-704P-201ENST00000364162 103 ntBASIC-0.76□□□□□ -2.53
CCDC88CQ9P219 RNU6-1113P-201ENST00000384348 107 ntBASIC-0.76□□□□□ -2.53
CCDC88CQ9P219 SNORD116-21-201ENST00000384507 92 ntBASIC-0.76□□□□□ -2.53
CCDC88CQ9P219 uc_338.19-201ENST00000616808 99 ntBASIC-0.76□□□□□ -2.53
CCDC88CQ9P219 RNU6-1168P-201ENST00000390831 104 ntBASIC-0.77□□□□□ -2.53
CCDC88CQ9P219 SNORD77.2-201ENST00000391045 68 ntBASIC-0.77□□□□□ -2.53
CCDC88CQ9P219 MIR1285-2-201ENST00000408311 88 ntBASIC-0.77□□□□□ -2.53
CCDC88CQ9P219 RNU7-174P-201ENST00000516248 59 ntBASIC-0.77□□□□□ -2.53
CCDC88CQ9P219 FAS-AS1.1-201ENST00000615327 126 ntBASIC-0.77□□□□□ -2.53
CCDC88CQ9P219 AP001318.4-201ENST00000616637 121 ntBASIC-0.77□□□□□ -2.53
CCDC88CQ9P219 U4.2-201ENST00000618561 85 ntBASIC-0.77□□□□□ -2.53
CCDC88CQ9P219 Y_RNA.290-201ENST00000364879 114 ntBASIC-0.77□□□□□ -2.53
CCDC88CQ9P219 SNORD116-22-201ENST00000384430 92 ntBASIC-0.77□□□□□ -2.53
CCDC88CQ9P219 RNU6-576P-201ENST00000390854 102 ntBASIC-0.77□□□□□ -2.53
CCDC88CQ9P219 RNU6-1333P-201ENST00000516162 93 ntBASIC-0.77□□□□□ -2.53
CCDC88CQ9P219 RNU6-982P-201ENST00000516216 102 ntBASIC-0.77□□□□□ -2.53
CCDC88CQ9P219 Y_RNA.93-201ENST00000363066 109 ntBASIC-0.78□□□□□ -2.53
CCDC88CQ9P219 AC090425.1-201ENST00000610007 140 ntBASIC-0.78□□□□□ -2.53
CCDC88CQ9P219 Y_RNA.180-201ENST00000363867 113 ntBASIC-0.79□□□□□ -2.54
CCDC88CQ9P219 RNY1P5-201ENST00000383890 115 ntBASIC-0.79□□□□□ -2.54
CCDC88CQ9P219 AC018880.2-201ENST00000414265 201 ntBASIC-0.79□□□□□ -2.54
CCDC88CQ9P219 AL021921.1-201ENST00000442774 93 ntBASIC-0.79□□□□□ -2.54
CCDC88CQ9P219 AL450471.1-201ENST00000447509 127 ntBASIC-0.79□□□□□ -2.54
CCDC88CQ9P219 RNU6-1238P-201ENST00000517215 102 ntBASIC-0.79□□□□□ -2.54
CCDC88CQ9P219 Y_RNA.107-201ENST00000363190 121 ntBASIC-0.79□□□□□ -2.54
CCDC88CQ9P219 Y_RNA.325-201ENST00000365171 122 ntBASIC-0.79□□□□□ -2.54
CCDC88CQ9P219 RNU6-1064P-201ENST00000410626 104 ntBASIC-0.79□□□□□ -2.54
CCDC88CQ9P219 RNU6-752P-201ENST00000516376 102 ntBASIC-0.79□□□□□ -2.54
CCDC88CQ9P219 RNU6-267P-201ENST00000516714 103 ntBASIC-0.79□□□□□ -2.54
CCDC88CQ9P219 MIR4520-1-201ENST00000582609 70 ntBASIC-0.79□□□□□ -2.54
CCDC88CQ9P219 U2.7-201ENST00000619197 100 ntBASIC-0.79□□□□□ -2.54
CCDC88CQ9P219 RNA5SP26-201ENST00000362406 119 ntBASIC-0.8□□□□□ -2.54
CCDC88CQ9P219 RNU6-22P-201ENST00000384355 107 ntBASIC-0.8□□□□□ -2.54
CCDC88CQ9P219 MIR507-201ENST00000385234 94 ntBASIC-0.8□□□□□ -2.54
CCDC88CQ9P219 MIR548Q-201ENST00000408404 100 ntBASIC-0.8□□□□□ -2.54
CCDC88CQ9P219 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC-0.8□□□□□ -2.54
CCDC88CQ9P219 HLA-S-202ENST00000425174 53 ntBASIC-0.8□□□□□ -2.54
CCDC88CQ9P219 RNU6-1108P-201ENST00000516308 104 ntBASIC-0.8□□□□□ -2.54
CCDC88CQ9P219 MIR5591-201ENST00000578248 65 ntBASIC-0.8□□□□□ -2.54
CCDC88CQ9P219 RNU6-633P-201ENST00000362612 103 ntBASIC-0.81□□□□□ -2.54
CCDC88CQ9P219 Y_RNA.264-201ENST00000364665 102 ntBASIC-0.81□□□□□ -2.54
CCDC88CQ9P219 Y_RNA.282-201ENST00000364793 102 ntBASIC-0.81□□□□□ -2.54
CCDC88CQ9P219 RNU6-209P-201ENST00000384118 107 ntBASIC-0.81□□□□□ -2.54
CCDC88CQ9P219 AL078595.1-201ENST00000404458 226 ntBASIC-0.81□□□□□ -2.54
CCDC88CQ9P219 Y_RNA.607-201ENST00000410597 98 ntBASIC-0.81□□□□□ -2.54
CCDC88CQ9P219 Y_RNA.613-201ENST00000410726 97 ntBASIC-0.81□□□□□ -2.54
CCDC88CQ9P219 U6.81-201ENST00000612550 106 ntBASIC-0.81□□□□□ -2.54
CCDC88CQ9P219 U6.95-201ENST00000636931 70 ntBASIC-0.81□□□□□ -2.54
CCDC88CQ9P219 Y_RNA.181-201ENST00000363872 101 ntBASIC-0.81□□□□□ -2.54
CCDC88CQ9P219 RNU6-164P-201ENST00000364604 103 ntBASIC-0.81□□□□□ -2.54
CCDC88CQ9P219 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC-0.81□□□□□ -2.54
CCDC88CQ9P219 RNU6-479P-201ENST00000516348 105 ntBASIC-0.81□□□□□ -2.54
CCDC88CQ9P219 SNORA40.13-201ENST00000516379 120 ntBASIC-0.81□□□□□ -2.54
CCDC88CQ9P219 AC005520.4-201ENST00000604337 90 ntBASIC-0.81□□□□□ -2.54
Retrieved 100 of 98,524 protein–RNA pairs in 169.9 ms