Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 AL450471.1-201ENST00000447509 127 ntBASIC-0.37□□□□□ -2.47
COL21A1Q96P44 Y_RNA.754-201ENST00000476024 102 ntBASIC-0.37□□□□□ -2.47
COL21A1Q96P44 RNU6-406P-201ENST00000516470 107 ntBASIC-0.37□□□□□ -2.47
COL21A1Q96P44 MIR3681-201ENST00000580089 72 ntBASIC-0.37□□□□□ -2.47
COL21A1Q96P44 Y_RNA.790-201ENST00000614282 102 ntBASIC-0.37□□□□□ -2.47
COL21A1Q96P44 Y_RNA.782-201ENST00000614695 102 ntBASIC-0.37□□□□□ -2.47
COL21A1Q96P44 MIR6854-201ENST00000614935 69 ntBASIC-0.37□□□□□ -2.47
COL21A1Q96P44 MALAT1.1-201ENST00000618249 95 ntBASIC-0.37□□□□□ -2.47
COL21A1Q96P44 snoR1.1-201ENST00000628177 80 ntBASIC-0.37□□□□□ -2.47
COL21A1Q96P44 SNORD114-14-201ENST00000362723 75 ntBASIC-0.38□□□□□ -2.47
COL21A1Q96P44 SNORA33.1-201ENST00000364957 130 ntBASIC-0.38□□□□□ -2.47
COL21A1Q96P44 RNU6-1081P-201ENST00000384537 107 ntBASIC-0.38□□□□□ -2.47
COL21A1Q96P44 Y_RNA.620-201ENST00000411009 88 ntBASIC-0.38□□□□□ -2.47
COL21A1Q96P44 RNU4-61P-201ENST00000411243 107 ntBASIC-0.38□□□□□ -2.47
COL21A1Q96P44 RNU6-640P-201ENST00000363693 105 ntBASIC-0.39□□□□□ -2.47
COL21A1Q96P44 RNU6-340P-201ENST00000364005 107 ntBASIC-0.39□□□□□ -2.47
COL21A1Q96P44 RNU6-219P-201ENST00000364728 107 ntBASIC-0.39□□□□□ -2.47
COL21A1Q96P44 MIR488-201ENST00000365739 83 ntBASIC-0.39□□□□□ -2.47
COL21A1Q96P44 RNU6-147P-201ENST00000383983 107 ntBASIC-0.39□□□□□ -2.47
COL21A1Q96P44 SNORA15B-2-201ENST00000384058 135 ntBASIC-0.39□□□□□ -2.47
COL21A1Q96P44 SNORA15B-1-201ENST00000384334 135 ntBASIC-0.39□□□□□ -2.47
COL21A1Q96P44 SNORD77.2-201ENST00000391045 68 ntBASIC-0.39□□□□□ -2.47
COL21A1Q96P44 RNU6-402P-201ENST00000410678 103 ntBASIC-0.39□□□□□ -2.47
COL21A1Q96P44 RNU6-919P-201ENST00000516731 104 ntBASIC-0.39□□□□□ -2.47
COL21A1Q96P44 YWHAEP3-201ENST00000582767 121 ntBASIC-0.39□□□□□ -2.47
COL21A1Q96P44 SNORD115-37-201ENST00000363768 82 ntBASIC-0.4□□□□□ -2.47
COL21A1Q96P44 Y_RNA.250-201ENST00000364542 110 ntBASIC-0.4□□□□□ -2.47
COL21A1Q96P44 RNU6-32P-201ENST00000383948 107 ntBASIC-0.4□□□□□ -2.47
COL21A1Q96P44 RNU6-13P-201ENST00000384248 107 ntBASIC-0.4□□□□□ -2.47
COL21A1Q96P44 SNORD116-22-201ENST00000384430 92 ntBASIC-0.4□□□□□ -2.47
COL21A1Q96P44 RNU6-905P-201ENST00000384434 107 ntBASIC-0.4□□□□□ -2.47
COL21A1Q96P44 RNU6-12P-201ENST00000384604 107 ntBASIC-0.4□□□□□ -2.47
COL21A1Q96P44 RNU6-41P-201ENST00000384741 107 ntBASIC-0.4□□□□□ -2.47
COL21A1Q96P44 MIR518B-201ENST00000385127 83 ntBASIC-0.4□□□□□ -2.47
COL21A1Q96P44 SNORA13-201ENST00000458790 133 ntBASIC-0.4□□□□□ -2.47
COL21A1Q96P44 RNU6-1108P-201ENST00000516308 104 ntBASIC-0.4□□□□□ -2.47
COL21A1Q96P44 SNORD22.1-201ENST00000516331 125 ntBASIC-0.4□□□□□ -2.47
COL21A1Q96P44 RNU6-267P-201ENST00000516714 103 ntBASIC-0.4□□□□□ -2.47
COL21A1Q96P44 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC-0.4□□□□□ -2.47
COL21A1Q96P44 Y_RNA.12-201ENST00000362393 112 ntBASIC-0.41□□□□□ -2.48
COL21A1Q96P44 RNU6-497P-201ENST00000365316 104 ntBASIC-0.41□□□□□ -2.48
COL21A1Q96P44 RNY1P7-201ENST00000384743 110 ntBASIC-0.41□□□□□ -2.48
COL21A1Q96P44 RNU6-721P-201ENST00000410155 105 ntBASIC-0.41□□□□□ -2.48
COL21A1Q96P44 AL035461.1-201ENST00000421490 332 ntBASIC-0.41□□□□□ -2.48
COL21A1Q96P44 AC093729.1-201ENST00000513074 128 ntBASIC-0.41□□□□□ -2.48
COL21A1Q96P44 AC021146.6-201ENST00000514659 117 ntBASIC-0.41□□□□□ -2.48
COL21A1Q96P44 RNU6-752P-201ENST00000516376 102 ntBASIC-0.41□□□□□ -2.48
COL21A1Q96P44 MIR3179-1-201ENST00000578940 84 ntBASIC-0.41□□□□□ -2.48
COL21A1Q96P44 MIR3179-2-201ENST00000579107 84 ntBASIC-0.41□□□□□ -2.48
COL21A1Q96P44 MIR3179-3-201ENST00000579566 84 ntBASIC-0.41□□□□□ -2.48
COL21A1Q96P44 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-0.41□□□□□ -2.48
COL21A1Q96P44 MIR3179-4-201ENST00000617599 84 ntBASIC-0.41□□□□□ -2.48
COL21A1Q96P44 RNU6-624P-201ENST00000363411 107 ntBASIC-0.42□□□□□ -2.48
COL21A1Q96P44 RNU6-44P-201ENST00000384045 107 ntBASIC-0.42□□□□□ -2.48
COL21A1Q96P44 MIR1255B2-201ENST00000408618 67 ntBASIC-0.42□□□□□ -2.48
COL21A1Q96P44 AC140658.3-201ENST00000567603 271 ntBASIC-0.42□□□□□ -2.48
COL21A1Q96P44 AL353803.5-201ENST00000599815 141 ntBASIC-0.42□□□□□ -2.48
COL21A1Q96P44 RNU6-681P-201ENST00000364012 104 ntBASIC-0.43□□□□□ -2.48
COL21A1Q96P44 Y_RNA.264-201ENST00000364665 102 ntBASIC-0.43□□□□□ -2.48
COL21A1Q96P44 MIR521-2-201ENST00000384818 87 ntBASIC-0.43□□□□□ -2.48
COL21A1Q96P44 CYP3A54P-201ENST00000566950 75 ntBASIC-0.43□□□□□ -2.48
COL21A1Q96P44 MIR4464-201ENST00000580818 92 ntBASIC-0.43□□□□□ -2.48
COL21A1Q96P44 MIR6739-201ENST00000622461 75 ntBASIC-0.43□□□□□ -2.48
COL21A1Q96P44 MIR548BB-201ENST00000626714 66 ntBASIC-0.43□□□□□ -2.48
COL21A1Q96P44 U2.22-201ENST00000636441 106 ntBASIC-0.43□□□□□ -2.48
COL21A1Q96P44 SNORD74.6-201ENST00000364796 70 ntBASIC-0.44□□□□□ -2.48
COL21A1Q96P44 SNORA62.4-201ENST00000365504 151 ntBASIC-0.44□□□□□ -2.48
COL21A1Q96P44 Y_RNA.484-201ENST00000384389 103 ntBASIC-0.44□□□□□ -2.48
COL21A1Q96P44 MIR124-2-201ENST00000385081 109 ntBASIC-0.44□□□□□ -2.48
COL21A1Q96P44 RNU6-1250P-201ENST00000391218 107 ntBASIC-0.44□□□□□ -2.48
COL21A1Q96P44 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC-0.44□□□□□ -2.48
COL21A1Q96P44 AP000533.3-201ENST00000447704 118 ntBASIC-0.44□□□□□ -2.48
COL21A1Q96P44 AC022137.1-201ENST00000483735 151 ntBASIC-0.44□□□□□ -2.48
COL21A1Q96P44 MIR548AI-201ENST00000579940 88 ntBASIC-0.44□□□□□ -2.48
COL21A1Q96P44 Y_RNA.189-201ENST00000363959 112 ntBASIC-0.45□□□□□ -2.48
COL21A1Q96P44 Y_RNA.291-201ENST00000364886 113 ntBASIC-0.45□□□□□ -2.48
COL21A1Q96P44 SNORD114-3-201ENST00000364969 75 ntBASIC-0.45□□□□□ -2.48
COL21A1Q96P44 MIR517B-201ENST00000385102 67 ntBASIC-0.45□□□□□ -2.48
COL21A1Q96P44 Y_RNA.611-201ENST00000410682 108 ntBASIC-0.45□□□□□ -2.48
COL21A1Q96P44 RNA5SP470-201ENST00000516463 106 ntBASIC-0.45□□□□□ -2.48
COL21A1Q96P44 RNU6-881P-201ENST00000516813 102 ntBASIC-0.45□□□□□ -2.48
COL21A1Q96P44 RNU6-844P-201ENST00000517175 102 ntBASIC-0.45□□□□□ -2.48
COL21A1Q96P44 MIR6888-201ENST00000621977 67 ntBASIC-0.45□□□□□ -2.48
COL21A1Q96P44 RNU6-675P-201ENST00000384236 104 ntBASIC-0.46□□□□□ -2.48
COL21A1Q96P44 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-0.46□□□□□ -2.48
COL21A1Q96P44 SNORD18.2-201ENST00000459604 70 ntBASIC-0.46□□□□□ -2.48
COL21A1Q96P44 RNU6-557P-201ENST00000516842 110 ntBASIC-0.46□□□□□ -2.48
COL21A1Q96P44 AL445584.3-201ENST00000617173 78 ntBASIC-0.46□□□□□ -2.48
COL21A1Q96P44 RNU6-330P-201ENST00000363015 107 ntBASIC-0.47□□□□□ -2.48
COL21A1Q96P44 RNU6-478P-201ENST00000363904 110 ntBASIC-0.47□□□□□ -2.48
COL21A1Q96P44 RNU6-1131P-201ENST00000364955 107 ntBASIC-0.47□□□□□ -2.48
COL21A1Q96P44 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-0.47□□□□□ -2.48
COL21A1Q96P44 RNA5SP89-201ENST00000410300 108 ntBASIC-0.47□□□□□ -2.48
COL21A1Q96P44 SCARNA21.1-201ENST00000515996 128 ntBASIC-0.47□□□□□ -2.48
COL21A1Q96P44 RNU6-168P-201ENST00000516189 101 ntBASIC-0.47□□□□□ -2.48
COL21A1Q96P44 RNU6-656P-201ENST00000516785 107 ntBASIC-0.47□□□□□ -2.48
COL21A1Q96P44 Y_RNA.17-201ENST00000362433 111 ntBASIC-0.48□□□□□ -2.49
COL21A1Q96P44 RNU6-686P-201ENST00000364839 107 ntBASIC-0.48□□□□□ -2.49
COL21A1Q96P44 RNU6-49P-201ENST00000384256 107 ntBASIC-0.48□□□□□ -2.49
COL21A1Q96P44 MIR519A2-201ENST00000384990 87 ntBASIC-0.48□□□□□ -2.49
Retrieved 100 of 98,524 protein–RNA pairs in 185 ms