Protein–RNA interactions for Protein: Q8N998

CCDC89, Coiled-coil domain-containing protein 89, humanhuman

Predictions only

Length 374 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC89Q8N998 AC008267.6-201ENST00000441664 139 ntBASIC-1.62□□□□□ -2.67
CCDC89Q8N998 RNU6-746P-201ENST00000384112 109 ntBASIC-1.63□□□□□ -2.67
CCDC89Q8N998 SNORD77.2-201ENST00000391045 68 ntBASIC-1.64□□□□□ -2.67
CCDC89Q8N998 AL035461.1-201ENST00000421490 332 ntBASIC-1.64□□□□□ -2.67
CCDC89Q8N998 SCARNA21.1-201ENST00000515996 128 ntBASIC-1.64□□□□□ -2.67
CCDC89Q8N998 SNORD63.1-201ENST00000516178 80 ntBASIC-1.64□□□□□ -2.67
CCDC89Q8N998 RNU6-1108P-201ENST00000516308 104 ntBASIC-1.64□□□□□ -2.67
CCDC89Q8N998 SNORA26.4-201ENST00000391188 123 ntBASIC-1.66□□□□□ -2.68
CCDC89Q8N998 snoU13.19-201ENST00000459148 104 ntBASIC-1.66□□□□□ -2.68
CCDC89Q8N998 RNU6-766P-201ENST00000362478 107 ntBASIC-1.67□□□□□ -2.68
CCDC89Q8N998 RNU6-681P-201ENST00000364012 104 ntBASIC-1.67□□□□□ -2.68
CCDC89Q8N998 RNU6-1157P-201ENST00000384456 106 ntBASIC-1.67□□□□□ -2.68
CCDC89Q8N998 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC-1.67□□□□□ -2.68
CCDC89Q8N998 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC-1.68□□□□□ -2.68
CCDC89Q8N998 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC-1.68□□□□□ -2.68
CCDC89Q8N998 MTATP8P2-201ENST00000435212 202 ntBASIC-1.68□□□□□ -2.68
CCDC89Q8N998 RNU6-656P-201ENST00000516785 107 ntBASIC-1.68□□□□□ -2.68
CCDC89Q8N998 MIR548AG1-201ENST00000579932 66 ntBASIC-1.68□□□□□ -2.68
CCDC89Q8N998 RNU6-1233P-201ENST00000362922 102 ntBASIC-1.69□□□□□ -2.68
CCDC89Q8N998 SNORD115-22-201ENST00000364456 82 ntBASIC-1.69□□□□□ -2.68
CCDC89Q8N998 AL021921.1-201ENST00000442774 93 ntBASIC-1.69□□□□□ -2.68
CCDC89Q8N998 RNU6-589P-201ENST00000516485 107 ntBASIC-1.69□□□□□ -2.68
CCDC89Q8N998 RNY1P9-201ENST00000532431 109 ntBASIC-1.69□□□□□ -2.68
CCDC89Q8N998 SNORD115-33-201ENST00000363723 82 ntBASIC-1.7□□□□□ -2.68
CCDC89Q8N998 MIR378F-201ENST00000578143 78 ntBASIC-1.7□□□□□ -2.68
CCDC89Q8N998 Y_RNA.544-201ENST00000384650 113 ntBASIC-1.71□□□□□ -2.68
CCDC89Q8N998 Y_RNA.613-201ENST00000410726 97 ntBASIC-1.71□□□□□ -2.68
CCDC89Q8N998 FAS-AS1.1-201ENST00000615327 126 ntBASIC-1.71□□□□□ -2.68
CCDC89Q8N998 MIR4668-201ENST00000582284 70 ntBASIC-1.72□□□□□ -2.68
CCDC89Q8N998 MIR4324-201ENST00000584846 72 ntBASIC-1.72□□□□□ -2.68
CCDC89Q8N998 MIR6738-201ENST00000619620 64 ntBASIC-1.72□□□□□ -2.68
CCDC89Q8N998 RNU6-633P-201ENST00000362612 103 ntBASIC-1.73□□□□□ -2.69
CCDC89Q8N998 SNORD115-37-201ENST00000363768 82 ntBASIC-1.73□□□□□ -2.69
CCDC89Q8N998 RNU6-1056P-201ENST00000383996 107 ntBASIC-1.73□□□□□ -2.69
CCDC89Q8N998 RNU6-81P-201ENST00000365608 104 ntBASIC-1.74□□□□□ -2.69
CCDC89Q8N998 RNU7-88P-201ENST00000458752 63 ntBASIC-1.74□□□□□ -2.69
CCDC89Q8N998 U2.7-201ENST00000619197 100 ntBASIC-1.74□□□□□ -2.69
CCDC89Q8N998 MIR450A1-201ENST00000362262 91 ntBASIC-1.75□□□□□ -2.69
CCDC89Q8N998 RNU6-1238P-201ENST00000517215 102 ntBASIC-1.75□□□□□ -2.69
CCDC89Q8N998 MIR3671-201ENST00000580455 88 ntBASIC-1.75□□□□□ -2.69
CCDC89Q8N998 Y_RNA.264-201ENST00000364665 102 ntBASIC-1.76□□□□□ -2.69
CCDC89Q8N998 RNU6-158P-201ENST00000517104 100 ntBASIC-1.76□□□□□ -2.69
CCDC89Q8N998 MIR3668-201ENST00000582138 75 ntBASIC-1.76□□□□□ -2.69
CCDC89Q8N998 MIR548C-201ENST00000384815 97 ntBASIC-1.77□□□□□ -2.69
CCDC89Q8N998 RNU7-134P-201ENST00000458997 64 ntBASIC-1.77□□□□□ -2.69
CCDC89Q8N998 RNU6-645P-201ENST00000364649 106 ntBASIC-1.78□□□□□ -2.69
CCDC89Q8N998 RNU6-246P-201ENST00000384702 107 ntBASIC-1.78□□□□□ -2.69
CCDC89Q8N998 AL353691.2-201ENST00000443795 59 ntBASIC-1.78□□□□□ -2.69
CCDC89Q8N998 RNU6-732P-201ENST00000516033 103 ntBASIC-1.78□□□□□ -2.69
CCDC89Q8N998 RNA5SP67-201ENST00000516422 131 ntBASIC-1.78□□□□□ -2.69
CCDC89Q8N998 U7.5-201ENST00000517224 61 ntBASIC-1.78□□□□□ -2.69
CCDC89Q8N998 RNU6-24P-201ENST00000384440 107 ntBASIC-1.79□□□□□ -2.7
CCDC89Q8N998 MT-TR-201ENST00000387439 65 ntBASIC-1.79□□□□□ -2.7
CCDC89Q8N998 RNU2-51P-201ENST00000410708 197 ntBASIC-1.79□□□□□ -2.7
CCDC89Q8N998 Y_RNA.620-201ENST00000411009 88 ntBASIC-1.79□□□□□ -2.7
CCDC89Q8N998 AC093729.1-201ENST00000513074 128 ntBASIC-1.79□□□□□ -2.7
CCDC89Q8N998 Y_RNA.709-201ENST00000516952 92 ntBASIC-1.79□□□□□ -2.7
CCDC89Q8N998 RNU6-330P-201ENST00000363015 107 ntBASIC-1.8□□□□□ -2.7
CCDC89Q8N998 RNU6-624P-201ENST00000363411 107 ntBASIC-1.8□□□□□ -2.7
CCDC89Q8N998 MIR29B1-201ENST00000385015 81 ntBASIC-1.8□□□□□ -2.7
CCDC89Q8N998 RNU6-1168P-201ENST00000390831 104 ntBASIC-1.8□□□□□ -2.7
CCDC89Q8N998 AL031737.1-201ENST00000450125 223 ntBASIC-1.8□□□□□ -2.7
CCDC89Q8N998 MIR507-201ENST00000385234 94 ntBASIC-1.81□□□□□ -2.7
CCDC89Q8N998 RNU6-267P-201ENST00000516714 103 ntBASIC-1.81□□□□□ -2.7
CCDC89Q8N998 MIR6818-201ENST00000621576 65 ntBASIC-1.81□□□□□ -2.7
CCDC89Q8N998 MIR2052-201ENST00000636055 55 ntBASIC-1.81□□□□□ -2.7
CCDC89Q8N998 RNU6-834P-201ENST00000362367 110 ntBASIC-1.82□□□□□ -2.7
CCDC89Q8N998 RNU6-22P-201ENST00000384355 107 ntBASIC-1.82□□□□□ -2.7
CCDC89Q8N998 Y_RNA.495-201ENST00000384435 112 ntBASIC-1.82□□□□□ -2.7
CCDC89Q8N998 MIR587-201ENST00000384845 96 ntBASIC-1.82□□□□□ -2.7
CCDC89Q8N998 RNU4-61P-201ENST00000411243 107 ntBASIC-1.82□□□□□ -2.7
CCDC89Q8N998 TMSB4XP3-201ENST00000445144 114 ntBASIC-1.82□□□□□ -2.7
CCDC89Q8N998 AP002795.1-201ENST00000534879 84 ntBASIC-1.82□□□□□ -2.7
CCDC89Q8N998 MIR4306-201ENST00000583390 91 ntBASIC-1.82□□□□□ -2.7
CCDC89Q8N998 RNU6-10P-201ENST00000384036 107 ntBASIC-1.83□□□□□ -2.7
CCDC89Q8N998 RNU6-807P-201ENST00000516805 107 ntBASIC-1.83□□□□□ -2.7
CCDC89Q8N998 SNORD19-201ENST00000391191 68 ntBASIC-1.84□□□□□ -2.7
CCDC89Q8N998 RNU6-402P-201ENST00000410678 103 ntBASIC-1.84□□□□□ -2.7
CCDC89Q8N998 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC-1.84□□□□□ -2.7
CCDC89Q8N998 AC132825.6-201ENST00000638861 357 ntBASIC-1.84□□□□□ -2.7
CCDC89Q8N998 RNU6-219P-201ENST00000364728 107 ntBASIC-1.85□□□□□ -2.71
CCDC89Q8N998 SNORD116-22-201ENST00000384430 92 ntBASIC-1.85□□□□□ -2.71
CCDC89Q8N998 RNU6-479P-201ENST00000516348 105 ntBASIC-1.85□□□□□ -2.71
CCDC89Q8N998 MALAT1.1-201ENST00000618249 95 ntBASIC-1.85□□□□□ -2.71
CCDC89Q8N998 RNA5SP26-201ENST00000362406 119 ntBASIC-1.86□□□□□ -2.71
CCDC89Q8N998 RNU6-1154P-201ENST00000391001 104 ntBASIC-1.86□□□□□ -2.71
CCDC89Q8N998 MIR3675-201ENST00000583661 73 ntBASIC-1.86□□□□□ -2.71
CCDC89Q8N998 AP001318.4-201ENST00000616637 121 ntBASIC-1.86□□□□□ -2.71
CCDC89Q8N998 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-1.86□□□□□ -2.71
CCDC89Q8N998 RNU6-1117P-201ENST00000384525 104 ntBASIC-1.87□□□□□ -2.71
CCDC89Q8N998 MIR548BB-201ENST00000626714 66 ntBASIC-1.87□□□□□ -2.71
CCDC89Q8N998 SNORA8.1-201ENST00000384250 140 ntBASIC-1.88□□□□□ -2.71
CCDC89Q8N998 RNU6-1174P-201ENST00000517278 101 ntBASIC-1.88□□□□□ -2.71
CCDC89Q8N998 MIR5683-201ENST00000636514 76 ntBASIC-1.88□□□□□ -2.71
CCDC89Q8N998 RNU6-604P-201ENST00000390917 100 ntBASIC-1.89□□□□□ -2.71
CCDC89Q8N998 RNU6-303P-201ENST00000517091 106 ntBASIC-1.89□□□□□ -2.71
CCDC89Q8N998 RNU6-576P-201ENST00000390854 102 ntBASIC-1.9□□□□□ -2.71
CCDC89Q8N998 MIR548M-201ENST00000408260 86 ntBASIC-1.9□□□□□ -2.71
CCDC89Q8N998 RNU6-982P-201ENST00000516216 102 ntBASIC-1.9□□□□□ -2.71
CCDC89Q8N998 SNORA40.13-201ENST00000516379 120 ntBASIC-1.9□□□□□ -2.71
Retrieved 100 of 98,524 protein–RNA pairs in 168.9 ms