Protein–RNA interactions for Protein: Q7RTT3

SSX9, Protein SSX9, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX9Q7RTT3 Y_RNA.162-201ENST00000363683 102 ntBASIC-2.24□□□□□ -2.77
SSX9Q7RTT3 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC-2.24□□□□□ -2.77
SSX9Q7RTT3 FAS-AS1.1-201ENST00000615327 126 ntBASIC-2.24□□□□□ -2.77
SSX9Q7RTT3 SNORD18.1-201ENST00000363807 70 ntBASIC-2.25□□□□□ -2.77
SSX9Q7RTT3 Y_RNA.525-201ENST00000384570 113 ntBASIC-2.25□□□□□ -2.77
SSX9Q7RTT3 RNU6-887P-201ENST00000410660 100 ntBASIC-2.25□□□□□ -2.77
SSX9Q7RTT3 AL021921.1-201ENST00000442774 93 ntBASIC-2.25□□□□□ -2.77
SSX9Q7RTT3 RNU7-107P-201ENST00000459121 61 ntBASIC-2.25□□□□□ -2.77
SSX9Q7RTT3 RNU6-1045P-201ENST00000516321 107 ntBASIC-2.25□□□□□ -2.77
SSX9Q7RTT3 RNU6-80P-201ENST00000384195 107 ntBASIC-2.26□□□□□ -2.77
SSX9Q7RTT3 RNU6-1211P-201ENST00000459179 105 ntBASIC-2.26□□□□□ -2.77
SSX9Q7RTT3 Y_RNA.684-201ENST00000516510 99 ntBASIC-2.26□□□□□ -2.77
SSX9Q7RTT3 MTND5P41-201ENST00000517498 206 ntBASIC-2.26□□□□□ -2.77
SSX9Q7RTT3 RNU6-379P-201ENST00000363813 104 ntBASIC-2.27□□□□□ -2.77
SSX9Q7RTT3 RNU6-704P-201ENST00000364162 103 ntBASIC-2.27□□□□□ -2.77
SSX9Q7RTT3 Y_RNA.223-201ENST00000364290 113 ntBASIC-2.28□□□□□ -2.77
SSX9Q7RTT3 SNORA40-201ENST00000388090 126 ntBASIC-2.28□□□□□ -2.77
SSX9Q7RTT3 RNU7-88P-201ENST00000458752 63 ntBASIC-2.28□□□□□ -2.77
SSX9Q7RTT3 MIR4490-201ENST00000582647 84 ntBASIC-2.28□□□□□ -2.77
SSX9Q7RTT3 Y_RNA.188-201ENST00000363952 111 ntBASIC-2.29□□□□□ -2.78
SSX9Q7RTT3 RNU6ATAC23P-201ENST00000408448 123 ntBASIC-2.29□□□□□ -2.78
SSX9Q7RTT3 SCARNA23-201ENST00000516060 130 ntBASIC-2.29□□□□□ -2.78
SSX9Q7RTT3 RNU6-752P-201ENST00000516376 102 ntBASIC-2.29□□□□□ -2.78
SSX9Q7RTT3 RNU6-388P-201ENST00000517012 105 ntBASIC-2.29□□□□□ -2.78
SSX9Q7RTT3 RNU6-389P-201ENST00000517048 105 ntBASIC-2.29□□□□□ -2.78
SSX9Q7RTT3 RNU6-119P-201ENST00000364882 107 ntBASIC-2.3□□□□□ -2.78
SSX9Q7RTT3 Y_RNA.348-201ENST00000365403 103 ntBASIC-2.3□□□□□ -2.78
SSX9Q7RTT3 Y_RNA.426-201ENST00000384068 113 ntBASIC-2.3□□□□□ -2.78
SSX9Q7RTT3 Y_RNA.475-201ENST00000384345 101 ntBASIC-2.3□□□□□ -2.78
SSX9Q7RTT3 MIR548A3-201ENST00000385297 97 ntBASIC-2.3□□□□□ -2.78
SSX9Q7RTT3 Y_RNA.606-201ENST00000410579 103 ntBASIC-2.3□□□□□ -2.78
SSX9Q7RTT3 AL450471.1-201ENST00000447509 127 ntBASIC-2.3□□□□□ -2.78
SSX9Q7RTT3 SNORD33.1-201ENST00000516213 88 ntBASIC-2.3□□□□□ -2.78
SSX9Q7RTT3 SNORD115-27-201ENST00000364430 82 ntBASIC-2.31□□□□□ -2.78
SSX9Q7RTT3 RNU6-1113P-201ENST00000384348 107 ntBASIC-2.31□□□□□ -2.78
SSX9Q7RTT3 RNU6-880P-201ENST00000384526 107 ntBASIC-2.31□□□□□ -2.78
SSX9Q7RTT3 MIR1236-201ENST00000408340 102 ntBASIC-2.31□□□□□ -2.78
SSX9Q7RTT3 Y_RNA.609-201ENST00000410669 89 ntBASIC-2.31□□□□□ -2.78
SSX9Q7RTT3 U7.5-201ENST00000517224 61 ntBASIC-2.31□□□□□ -2.78
SSX9Q7RTT3 MIR3914-2-201ENST00000637339 95 ntBASIC-2.31□□□□□ -2.78
SSX9Q7RTT3 Y_RNA.96-201ENST00000363092 109 ntBASIC-2.32□□□□□ -2.78
SSX9Q7RTT3 Y_RNA.144-201ENST00000363521 113 ntBASIC-2.32□□□□□ -2.78
SSX9Q7RTT3 Y_RNA.225-201ENST00000364326 97 ntBASIC-2.32□□□□□ -2.78
SSX9Q7RTT3 MIR5683-201ENST00000636514 76 ntBASIC-2.32□□□□□ -2.78
SSX9Q7RTT3 SNORD116-10-201ENST00000363791 102 ntBASIC-2.33□□□□□ -2.78
SSX9Q7RTT3 RNU6-1011P-201ENST00000384668 107 ntBASIC-2.33□□□□□ -2.78
SSX9Q7RTT3 Y_RNA.678-201ENST00000516408 96 ntBASIC-2.33□□□□□ -2.78
SSX9Q7RTT3 RNU6-257P-201ENST00000410238 98 ntBASIC-2.34□□□□□ -2.78
SSX9Q7RTT3 AP002795.1-201ENST00000534879 84 ntBASIC-2.34□□□□□ -2.78
SSX9Q7RTT3 AL353621.2-201ENST00000605340 133 ntBASIC-2.34□□□□□ -2.78
SSX9Q7RTT3 RNU6-463P-201ENST00000384340 107 ntBASIC-2.35□□□□□ -2.79
SSX9Q7RTT3 RNU6-400P-201ENST00000391173 106 ntBASIC-2.35□□□□□ -2.79
SSX9Q7RTT3 RNU6-168P-201ENST00000516189 101 ntBASIC-2.35□□□□□ -2.79
SSX9Q7RTT3 SNORD19-201ENST00000391191 68 ntBASIC-2.36□□□□□ -2.79
SSX9Q7RTT3 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC-2.36□□□□□ -2.79
SSX9Q7RTT3 Y_RNA.281-201ENST00000364774 94 ntBASIC-2.37□□□□□ -2.79
SSX9Q7RTT3 RNU6-246P-201ENST00000384702 107 ntBASIC-2.37□□□□□ -2.79
SSX9Q7RTT3 RNU6-904P-201ENST00000516206 101 ntBASIC-2.37□□□□□ -2.79
SSX9Q7RTT3 MIR548AG1-201ENST00000579932 66 ntBASIC-2.37□□□□□ -2.79
SSX9Q7RTT3 U6.95-201ENST00000636931 70 ntBASIC-2.37□□□□□ -2.79
SSX9Q7RTT3 RNU6-681P-201ENST00000364012 104 ntBASIC-2.38□□□□□ -2.79
SSX9Q7RTT3 Y_RNA.343-201ENST00000365354 112 ntBASIC-2.38□□□□□ -2.79
SSX9Q7RTT3 MIR487B-201ENST00000385021 84 ntBASIC-2.38□□□□□ -2.79
SSX9Q7RTT3 RPL35AP4-201ENST00000412007 102 ntBASIC-2.38□□□□□ -2.79
SSX9Q7RTT3 RNU6-1247P-201ENST00000516622 98 ntBASIC-2.38□□□□□ -2.79
SSX9Q7RTT3 RNU6-971P-201ENST00000516920 106 ntBASIC-2.38□□□□□ -2.79
SSX9Q7RTT3 Y_RNA.712-201ENST00000517011 92 ntBASIC-2.38□□□□□ -2.79
SSX9Q7RTT3 RNU6-537P-201ENST00000517277 103 ntBASIC-2.38□□□□□ -2.79
SSX9Q7RTT3 RNU6-340P-201ENST00000364005 107 ntBASIC-2.39□□□□□ -2.79
SSX9Q7RTT3 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC-2.39□□□□□ -2.79
SSX9Q7RTT3 RNU7-153P-201ENST00000516455 62 ntBASIC-2.39□□□□□ -2.79
SSX9Q7RTT3 Y_RNA.502-201ENST00000384478 113 ntBASIC-2.4□□□□□ -2.79
SSX9Q7RTT3 AC090616.4-201ENST00000448026 115 ntBASIC-2.4□□□□□ -2.79
SSX9Q7RTT3 RNU6-182P-201ENST00000516970 105 ntBASIC-2.4□□□□□ -2.79
SSX9Q7RTT3 RNU6-228P-201ENST00000362700 106 ntBASIC-2.41□□□□□ -2.8
SSX9Q7RTT3 MIR548Q-201ENST00000408404 100 ntBASIC-2.41□□□□□ -2.8
SSX9Q7RTT3 RNU7-61P-201ENST00000515897 61 ntBASIC-2.41□□□□□ -2.8
SSX9Q7RTT3 RNU6-656P-201ENST00000516785 107 ntBASIC-2.41□□□□□ -2.8
SSX9Q7RTT3 U2.7-201ENST00000619197 100 ntBASIC-2.41□□□□□ -2.8
SSX9Q7RTT3 RNU6-1107P-201ENST00000364817 104 ntBASIC-2.42□□□□□ -2.8
SSX9Q7RTT3 AL035461.1-201ENST00000421490 332 ntBASIC-2.42□□□□□ -2.8
SSX9Q7RTT3 SCARNA15.1-201ENST00000516384 125 ntBASIC-2.42□□□□□ -2.8
SSX9Q7RTT3 AC018880.2-201ENST00000414265 201 ntBASIC-2.43□□□□□ -2.8
SSX9Q7RTT3 AC108019.1-201ENST00000512540 175 ntBASIC-2.43□□□□□ -2.8
SSX9Q7RTT3 RNU6-1174P-201ENST00000517278 101 ntBASIC-2.43□□□□□ -2.8
SSX9Q7RTT3 RNU6-774P-201ENST00000363238 107 ntBASIC-2.44□□□□□ -2.8
SSX9Q7RTT3 RNU6-807P-201ENST00000516805 107 ntBASIC-2.44□□□□□ -2.8
SSX9Q7RTT3 Y_RNA.175-201ENST00000363794 111 ntBASIC-2.45□□□□□ -2.8
SSX9Q7RTT3 RNU6-886P-201ENST00000384319 105 ntBASIC-2.45□□□□□ -2.8
SSX9Q7RTT3 MIR548C-201ENST00000384815 97 ntBASIC-2.45□□□□□ -2.8
SSX9Q7RTT3 MIR496-201ENST00000385226 102 ntBASIC-2.46□□□□□ -2.8
SSX9Q7RTT3 RNU7-200P-201ENST00000516105 62 ntBASIC-2.46□□□□□ -2.8
SSX9Q7RTT3 RNU6-79P-201ENST00000362511 107 ntBASIC-2.47□□□□□ -2.8
SSX9Q7RTT3 Y_RNA.103-201ENST00000363171 102 ntBASIC-2.47□□□□□ -2.8
SSX9Q7RTT3 Y_RNA.228-201ENST00000364346 98 ntBASIC-2.47□□□□□ -2.8
SSX9Q7RTT3 Y_RNA.257-201ENST00000364596 102 ntBASIC-2.47□□□□□ -2.8
SSX9Q7RTT3 SNORD77.2-201ENST00000391045 68 ntBASIC-2.47□□□□□ -2.8
SSX9Q7RTT3 RNU6-162P-201ENST00000516228 103 ntBASIC-2.48□□□□□ -2.81
SSX9Q7RTT3 RNU6-694P-201ENST00000364071 147 ntBASIC-2.49□□□□□ -2.81
SSX9Q7RTT3 Y_RNA.236-201ENST00000364427 111 ntBASIC-2.49□□□□□ -2.81
Retrieved 100 of 98,524 protein–RNA pairs in 9.2 ms