Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 Y_RNA.620-201ENST00000411009 88 ntBASIC-0.64□□□□□ -2.51
NEDD4P46934 AL035461.1-201ENST00000421490 332 ntBASIC-0.64□□□□□ -2.51
NEDD4P46934 AC021146.6-201ENST00000514659 117 ntBASIC-0.64□□□□□ -2.51
NEDD4P46934 YWHAEP3-201ENST00000582767 121 ntBASIC-0.64□□□□□ -2.51
NEDD4P46934 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-0.64□□□□□ -2.51
NEDD4P46934 SNORA63.4-201ENST00000362763 126 ntBASIC-0.65□□□□□ -2.51
NEDD4P46934 RNU6-340P-201ENST00000364005 107 ntBASIC-0.65□□□□□ -2.51
NEDD4P46934 SNORD115-23-201ENST00000364461 82 ntBASIC-0.65□□□□□ -2.51
NEDD4P46934 MIR518B-201ENST00000385127 83 ntBASIC-0.65□□□□□ -2.51
NEDD4P46934 RNA5SP266-201ENST00000410273 108 ntBASIC-0.65□□□□□ -2.51
NEDD4P46934 DLEU2_3.2-201ENST00000612883 73 ntBASIC-0.65□□□□□ -2.51
NEDD4P46934 MIR6854-201ENST00000614935 69 ntBASIC-0.65□□□□□ -2.51
NEDD4P46934 MIR203A-201ENST00000384836 110 ntBASIC-0.66□□□□□ -2.52
NEDD4P46934 SNORD57-201ENST00000448188 72 ntBASIC-0.66□□□□□ -2.52
NEDD4P46934 SNORD38.3-201ENST00000516599 73 ntBASIC-0.66□□□□□ -2.52
NEDD4P46934 RNY1P9-201ENST00000532431 109 ntBASIC-0.66□□□□□ -2.52
NEDD4P46934 RNU6-624P-201ENST00000363411 107 ntBASIC-0.67□□□□□ -2.52
NEDD4P46934 SNORD74.6-201ENST00000364796 70 ntBASIC-0.67□□□□□ -2.52
NEDD4P46934 SNORA62.4-201ENST00000365504 151 ntBASIC-0.67□□□□□ -2.52
NEDD4P46934 U2.22-201ENST00000636441 106 ntBASIC-0.67□□□□□ -2.52
NEDD4P46934 RNY1P7-201ENST00000384743 110 ntBASIC-0.68□□□□□ -2.52
NEDD4P46934 RNA5SP470-201ENST00000516463 106 ntBASIC-0.68□□□□□ -2.52
NEDD4P46934 RNA5SP147-201ENST00000516493 109 ntBASIC-0.68□□□□□ -2.52
NEDD4P46934 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC-0.68□□□□□ -2.52
NEDD4P46934 Y_RNA.12-201ENST00000362393 112 ntBASIC-0.69□□□□□ -2.52
NEDD4P46934 RNU6-219P-201ENST00000364728 107 ntBASIC-0.69□□□□□ -2.52
NEDD4P46934 RNU6-640P-201ENST00000363693 105 ntBASIC-0.7□□□□□ -2.52
NEDD4P46934 RNA5SP331-201ENST00000364986 107 ntBASIC-0.7□□□□□ -2.52
NEDD4P46934 RNU6-905P-201ENST00000384434 107 ntBASIC-0.7□□□□□ -2.52
NEDD4P46934 MIR521-2-201ENST00000384818 87 ntBASIC-0.7□□□□□ -2.52
NEDD4P46934 RNU6-402P-201ENST00000410678 103 ntBASIC-0.7□□□□□ -2.52
NEDD4P46934 MIR5704-201ENST00000584029 77 ntBASIC-0.7□□□□□ -2.52
NEDD4P46934 RNU6-497P-201ENST00000365316 104 ntBASIC-0.71□□□□□ -2.52
NEDD4P46934 Y_RNA.514-201ENST00000384528 112 ntBASIC-0.71□□□□□ -2.52
NEDD4P46934 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-0.71□□□□□ -2.52
NEDD4P46934 AC140658.3-201ENST00000567603 271 ntBASIC-0.71□□□□□ -2.52
NEDD4P46934 SNORA33.1-201ENST00000364957 130 ntBASIC-0.72□□□□□ -2.52
NEDD4P46934 MIR587-201ENST00000384845 96 ntBASIC-0.72□□□□□ -2.52
NEDD4P46934 MIR196A1-201ENST00000388006 70 ntBASIC-0.72□□□□□ -2.52
NEDD4P46934 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC-0.72□□□□□ -2.52
NEDD4P46934 SCARNA21.1-201ENST00000515996 128 ntBASIC-0.72□□□□□ -2.52
NEDD4P46934 SCARNA20.2-201ENST00000516052 116 ntBASIC-0.72□□□□□ -2.52
NEDD4P46934 SCARNA17-201ENST00000516183 144 ntBASIC-0.72□□□□□ -2.52
NEDD4P46934 RNU6-1108P-201ENST00000516308 104 ntBASIC-0.72□□□□□ -2.52
NEDD4P46934 RNU6-557P-201ENST00000516842 110 ntBASIC-0.72□□□□□ -2.52
NEDD4P46934 MIR6739-201ENST00000622461 75 ntBASIC-0.72□□□□□ -2.52
NEDD4P46934 Y_RNA.246-201ENST00000364495 108 ntBASIC-0.73□□□□□ -2.53
NEDD4P46934 MIR488-201ENST00000365739 83 ntBASIC-0.73□□□□□ -2.53
NEDD4P46934 RNU6-44P-201ENST00000384045 107 ntBASIC-0.73□□□□□ -2.53
NEDD4P46934 Y_RNA.457-201ENST00000384237 111 ntBASIC-0.73□□□□□ -2.53
NEDD4P46934 RNU6-721P-201ENST00000410155 105 ntBASIC-0.73□□□□□ -2.53
NEDD4P46934 MIR3179-1-201ENST00000578940 84 ntBASIC-0.73□□□□□ -2.53
NEDD4P46934 MIR3179-2-201ENST00000579107 84 ntBASIC-0.73□□□□□ -2.53
NEDD4P46934 MIR3179-3-201ENST00000579566 84 ntBASIC-0.73□□□□□ -2.53
NEDD4P46934 MIR3179-4-201ENST00000617599 84 ntBASIC-0.73□□□□□ -2.53
NEDD4P46934 MIR548BB-201ENST00000626714 66 ntBASIC-0.73□□□□□ -2.53
NEDD4P46934 RNU6-881P-201ENST00000516813 102 ntBASIC-0.74□□□□□ -2.53
NEDD4P46934 CYP3A54P-201ENST00000566950 75 ntBASIC-0.74□□□□□ -2.53
NEDD4P46934 Y_RNA.583-201ENST00000391033 113 ntBASIC-0.75□□□□□ -2.53
NEDD4P46934 RNU6-267P-201ENST00000516714 103 ntBASIC-0.75□□□□□ -2.53
NEDD4P46934 AC090617.8-201ENST00000623339 167 ntBASIC-0.75□□□□□ -2.53
NEDD4P46934 SNORD114-25-201ENST00000363742 72 ntBASIC-0.76□□□□□ -2.53
NEDD4P46934 RNU6-675P-201ENST00000384236 104 ntBASIC-0.76□□□□□ -2.53
NEDD4P46934 AL500527.2-201ENST00000454105 95 ntBASIC-0.76□□□□□ -2.53
NEDD4P46934 SNORD22.1-201ENST00000516331 125 ntBASIC-0.76□□□□□ -2.53
NEDD4P46934 RNU6-844P-201ENST00000517175 102 ntBASIC-0.76□□□□□ -2.53
NEDD4P46934 AL353803.5-201ENST00000599815 141 ntBASIC-0.76□□□□□ -2.53
NEDD4P46934 MIR8068-201ENST00000618032 68 ntBASIC-0.76□□□□□ -2.53
NEDD4P46934 MIR6738-201ENST00000619620 64 ntBASIC-0.76□□□□□ -2.53
NEDD4P46934 Y_RNA.484-201ENST00000384389 103 ntBASIC-0.77□□□□□ -2.53
NEDD4P46934 MIR1255B2-201ENST00000408618 67 ntBASIC-0.77□□□□□ -2.53
NEDD4P46934 RNU6-168P-201ENST00000516189 101 ntBASIC-0.77□□□□□ -2.53
NEDD4P46934 MIR4324-201ENST00000584846 72 ntBASIC-0.77□□□□□ -2.53
NEDD4P46934 RNU6-686P-201ENST00000364839 107 ntBASIC-0.78□□□□□ -2.53
NEDD4P46934 RNU6-10P-201ENST00000384036 107 ntBASIC-0.78□□□□□ -2.53
NEDD4P46934 RNU6-1250P-201ENST00000391218 107 ntBASIC-0.78□□□□□ -2.53
NEDD4P46934 Y_RNA.611-201ENST00000410682 108 ntBASIC-0.78□□□□□ -2.53
NEDD4P46934 RNU6-303P-201ENST00000517091 106 ntBASIC-0.79□□□□□ -2.54
NEDD4P46934 MIR4320-201ENST00000636981 65 ntBASIC-0.79□□□□□ -2.54
NEDD4P46934 RNU6-129P-201ENST00000391022 107 ntBASIC-0.8□□□□□ -2.54
NEDD4P46934 AC022137.1-201ENST00000483735 151 ntBASIC-0.8□□□□□ -2.54
NEDD4P46934 Y_RNA.189-201ENST00000363959 112 ntBASIC-0.81□□□□□ -2.54
NEDD4P46934 SNORD83B-201ENST00000386745 93 ntBASIC-0.81□□□□□ -2.54
NEDD4P46934 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-0.81□□□□□ -2.54
NEDD4P46934 AC006160.2-201ENST00000637708 154 ntBASIC-0.81□□□□□ -2.54
NEDD4P46934 Y_RNA.468-201ENST00000384298 102 ntBASIC-0.82□□□□□ -2.54
NEDD4P46934 MIR517B-201ENST00000385102 67 ntBASIC-0.82□□□□□ -2.54
NEDD4P46934 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-0.82□□□□□ -2.54
NEDD4P46934 RNU6-380P-201ENST00000410207 107 ntBASIC-0.82□□□□□ -2.54
NEDD4P46934 RNA5SP89-201ENST00000410300 108 ntBASIC-0.82□□□□□ -2.54
NEDD4P46934 SNX3P1X-201ENST00000414887 175 ntBASIC-0.82□□□□□ -2.54
NEDD4P46934 Y_RNA.17-201ENST00000362433 111 ntBASIC-0.83□□□□□ -2.54
NEDD4P46934 RNU6-1134P-201ENST00000365156 101 ntBASIC-0.83□□□□□ -2.54
NEDD4P46934 AP000533.3-201ENST00000447704 118 ntBASIC-0.83□□□□□ -2.54
NEDD4P46934 SNORD18.2-201ENST00000459604 70 ntBASIC-0.83□□□□□ -2.54
NEDD4P46934 RNU7-154P-201ENST00000516194 62 ntBASIC-0.83□□□□□ -2.54
NEDD4P46934 MIRLET7A1-201ENST00000362295 80 ntBASIC-0.84□□□□□ -2.54
NEDD4P46934 AL021921.1-201ENST00000442774 93 ntBASIC-0.84□□□□□ -2.54
NEDD4P46934 MIR3675-201ENST00000583661 73 ntBASIC-0.84□□□□□ -2.54
NEDD4P46934 IGLL4P-201ENST00000614590 133 ntBASIC-0.84□□□□□ -2.54
Retrieved 100 of 98,524 protein–RNA pairs in 170.6 ms