Protein–RNA interactions for Protein: P12111

COL6A3, Collagen alpha-3(VI) chain, humanhuman

Predictions only

Length 3,177 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3P12111 Y_RNA.402-201ENST00000383972 102 ntBASIC-1.52□□□□□ -2.65
COL6A3P12111 RNU7-160P-201ENST00000516660 62 ntBASIC-1.52□□□□□ -2.65
COL6A3P12111 RNU6-176P-201ENST00000517196 105 ntBASIC-1.52□□□□□ -2.65
COL6A3P12111 AC130289.1-201ENST00000577321 73 ntBASIC-1.52□□□□□ -2.65
COL6A3P12111 MIR3675-201ENST00000583661 73 ntBASIC-1.52□□□□□ -2.65
COL6A3P12111 RNU6-1289P-201ENST00000384431 106 ntBASIC-1.52□□□□□ -2.65
COL6A3P12111 Y_RNA.661-201ENST00000516003 99 ntBASIC-1.52□□□□□ -2.65
COL6A3P12111 Y_RNA.686-201ENST00000516548 134 ntBASIC-1.52□□□□□ -2.65
COL6A3P12111 MIR3144-201ENST00000579460 79 ntBASIC-1.52□□□□□ -2.65
COL6A3P12111 RNU7-153P-201ENST00000516455 62 ntBASIC-1.53□□□□□ -2.65
COL6A3P12111 RNU6-182P-201ENST00000516970 105 ntBASIC-1.53□□□□□ -2.65
COL6A3P12111 RNU6-290P-201ENST00000365212 101 ntBASIC-1.53□□□□□ -2.65
COL6A3P12111 MIR548D2-201ENST00000384955 97 ntBASIC-1.53□□□□□ -2.65
COL6A3P12111 SNORA75.5-201ENST00000391291 81 ntBASIC-1.53□□□□□ -2.65
COL6A3P12111 SNORA40.14-201ENST00000516543 86 ntBASIC-1.53□□□□□ -2.65
COL6A3P12111 Y_RNA.88-201ENST00000363029 99 ntBASIC-1.53□□□□□ -2.66
COL6A3P12111 RNA5SP215-201ENST00000363440 122 ntBASIC-1.53□□□□□ -2.66
COL6A3P12111 Y_RNA.292-201ENST00000364904 97 ntBASIC-1.53□□□□□ -2.66
COL6A3P12111 RNU6-483P-201ENST00000384088 108 ntBASIC-1.53□□□□□ -2.66
COL6A3P12111 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC-1.53□□□□□ -2.66
COL6A3P12111 RNU7-30P-201ENST00000516835 62 ntBASIC-1.53□□□□□ -2.66
COL6A3P12111 MIR7110-201ENST00000612638 86 ntBASIC-1.53□□□□□ -2.66
COL6A3P12111 SNORD45.1-201ENST00000363181 77 ntBASIC-1.54□□□□□ -2.66
COL6A3P12111 Y_RNA.281-201ENST00000364774 94 ntBASIC-1.54□□□□□ -2.66
COL6A3P12111 Y_RNA.320-201ENST00000365144 102 ntBASIC-1.54□□□□□ -2.66
COL6A3P12111 RNU4-11P-201ENST00000365287 132 ntBASIC-1.54□□□□□ -2.66
COL6A3P12111 SNORA63.7-201ENST00000365579 123 ntBASIC-1.54□□□□□ -2.66
COL6A3P12111 MIR1254-1-201ENST00000408257 97 ntBASIC-1.54□□□□□ -2.66
COL6A3P12111 MIR4777-201ENST00000583710 86 ntBASIC-1.54□□□□□ -2.66
COL6A3P12111 RNU6-1153P-201ENST00000516760 105 ntBASIC-1.54□□□□□ -2.66
COL6A3P12111 MIR3658-201ENST00000636291 56 ntBASIC-1.54□□□□□ -2.66
COL6A3P12111 RNU6-890P-201ENST00000384121 107 ntBASIC-1.55□□□□□ -2.66
COL6A3P12111 RNU6-520P-201ENST00000384717 104 ntBASIC-1.55□□□□□ -2.66
COL6A3P12111 RNU6-121P-201ENST00000410525 99 ntBASIC-1.55□□□□□ -2.66
COL6A3P12111 RNU6-300P-201ENST00000459080 104 ntBASIC-1.55□□□□□ -2.66
COL6A3P12111 SNORD116.3-201ENST00000517176 78 ntBASIC-1.55□□□□□ -2.66
COL6A3P12111 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-1.55□□□□□ -2.66
COL6A3P12111 Y_RNA.17-201ENST00000362433 111 ntBASIC-1.55□□□□□ -2.66
COL6A3P12111 MIR122-201ENST00000385044 85 ntBASIC-1.55□□□□□ -2.66
COL6A3P12111 RNU6-172P-201ENST00000411000 93 ntBASIC-1.55□□□□□ -2.66
COL6A3P12111 RNU6-1108P-201ENST00000516308 104 ntBASIC-1.55□□□□□ -2.66
COL6A3P12111 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC-1.55□□□□□ -2.66
COL6A3P12111 DLEU2_1.1-201ENST00000612089 120 ntBASIC-1.55□□□□□ -2.66
COL6A3P12111 RNU6-624P-201ENST00000363411 107 ntBASIC-1.55□□□□□ -2.66
COL6A3P12111 RNU6-1047P-201ENST00000364418 107 ntBASIC-1.55□□□□□ -2.66
COL6A3P12111 RNA5SP173-201ENST00000364857 136 ntBASIC-1.55□□□□□ -2.66
COL6A3P12111 RNU6-813P-201ENST00000384691 107 ntBASIC-1.55□□□□□ -2.66
COL6A3P12111 AC103810.7-201ENST00000607821 91 ntBASIC-1.55□□□□□ -2.66
COL6A3P12111 MIR1263-201ENST00000408324 86 ntBASIC-1.56□□□□□ -2.66
COL6A3P12111 MIR5690-201ENST00000583739 73 ntBASIC-1.56□□□□□ -2.66
COL6A3P12111 AC113139.1-201ENST00000605049 239 ntBASIC-1.56□□□□□ -2.66
COL6A3P12111 SNORD45.2-201ENST00000363552 72 ntBASIC-1.56□□□□□ -2.66
COL6A3P12111 RNU6-326P-201ENST00000365480 107 ntBASIC-1.56□□□□□ -2.66
COL6A3P12111 SNORD37.2-201ENST00000391075 66 ntBASIC-1.56□□□□□ -2.66
COL6A3P12111 RNU6-92P-201ENST00000605893 104 ntBASIC-1.56□□□□□ -2.66
COL6A3P12111 RNU6-755P-201ENST00000364400 103 ntBASIC-1.57□□□□□ -2.66
COL6A3P12111 RNU6-1296P-201ENST00000383879 107 ntBASIC-1.57□□□□□ -2.66
COL6A3P12111 Y_RNA.11-201ENST00000362375 109 ntBASIC-1.57□□□□□ -2.66
COL6A3P12111 RNU6-810P-201ENST00000364001 107 ntBASIC-1.57□□□□□ -2.66
COL6A3P12111 Y_RNA.496-201ENST00000384444 101 ntBASIC-1.57□□□□□ -2.66
COL6A3P12111 Y_RNA.609-201ENST00000410669 89 ntBASIC-1.57□□□□□ -2.66
COL6A3P12111 RNU6-314P-201ENST00000516574 104 ntBASIC-1.57□□□□□ -2.66
COL6A3P12111 RNU6-303P-201ENST00000517091 106 ntBASIC-1.57□□□□□ -2.66
COL6A3P12111 RNU6-537P-201ENST00000517277 103 ntBASIC-1.57□□□□□ -2.66
COL6A3P12111 MIR5009-201ENST00000578736 100 ntBASIC-1.57□□□□□ -2.66
COL6A3P12111 Z99129.1-201ENST00000612510 255 ntBASIC-1.57□□□□□ -2.66
COL6A3P12111 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC-1.57□□□□□ -2.66
COL6A3P12111 Y_RNA.16-201ENST00000362421 102 ntBASIC-1.57□□□□□ -2.66
COL6A3P12111 Y_RNA.553-201ENST00000384670 102 ntBASIC-1.57□□□□□ -2.66
COL6A3P12111 MIR559-201ENST00000385188 96 ntBASIC-1.57□□□□□ -2.66
COL6A3P12111 MIR4694-201ENST00000578534 80 ntBASIC-1.57□□□□□ -2.66
COL6A3P12111 MIR8053-201ENST00000613344 75 ntBASIC-1.57□□□□□ -2.66
COL6A3P12111 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC-1.57□□□□□ -2.66
COL6A3P12111 Y_RNA.166-201ENST00000363730 102 ntBASIC-1.58□□□□□ -2.66
COL6A3P12111 MTND2P23-201ENST00000422990 651 ntBASIC-1.58□□□□□ -2.66
COL6A3P12111 RNU6-68P-201ENST00000516576 104 ntBASIC-1.58□□□□□ -2.66
COL6A3P12111 RNU7-121P-201ENST00000516604 62 ntBASIC-1.58□□□□□ -2.66
COL6A3P12111 AC104985.2-201ENST00000620598 500 ntBASIC-1.58□□□□□ -2.66
COL6A3P12111 RNU6-770P-201ENST00000363929 105 ntBASIC-1.58□□□□□ -2.66
COL6A3P12111 RNU6-867P-201ENST00000364956 107 ntBASIC-1.58□□□□□ -2.66
COL6A3P12111 RNU6-1340P-201ENST00000384438 107 ntBASIC-1.58□□□□□ -2.66
COL6A3P12111 RNU6-542P-201ENST00000516405 103 ntBASIC-1.58□□□□□ -2.66
COL6A3P12111 Y_RNA.688-201ENST00000516565 95 ntBASIC-1.58□□□□□ -2.66
COL6A3P12111 Y_RNA.693-201ENST00000516641 110 ntBASIC-1.58□□□□□ -2.66
COL6A3P12111 MIR4796-201ENST00000580742 81 ntBASIC-1.58□□□□□ -2.66
COL6A3P12111 AL160413.1-201ENST00000622780 310 ntBASIC-1.58□□□□□ -2.66
COL6A3P12111 Y_RNA.84-201ENST00000363011 104 ntBASIC-1.59□□□□□ -2.66
COL6A3P12111 Y_RNA.337-201ENST00000365312 102 ntBASIC-1.59□□□□□ -2.66
COL6A3P12111 Y_RNA.563-201ENST00000384707 108 ntBASIC-1.59□□□□□ -2.66
COL6A3P12111 RNU6-604P-201ENST00000390917 100 ntBASIC-1.59□□□□□ -2.66
COL6A3P12111 SNORA40.15-201ENST00000516884 107 ntBASIC-1.59□□□□□ -2.66
COL6A3P12111 Y_RNA.435-201ENST00000384095 112 ntBASIC-1.59□□□□□ -2.66
COL6A3P12111 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-1.59□□□□□ -2.66
COL6A3P12111 RNY3P15-201ENST00000516297 97 ntBASIC-1.59□□□□□ -2.66
COL6A3P12111 RNU6-1338P-201ENST00000516328 91 ntBASIC-1.59□□□□□ -2.66
COL6A3P12111 Y_RNA.705-201ENST00000516862 110 ntBASIC-1.59□□□□□ -2.66
COL6A3P12111 AC062037.1-201ENST00000605302 128 ntBASIC-1.59□□□□□ -2.66
COL6A3P12111 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC-1.59□□□□□ -2.66
COL6A3P12111 RNU6-1042P-201ENST00000384204 107 ntBASIC-1.59□□□□□ -2.66
COL6A3P12111 RNU6-639P-201ENST00000384074 107 ntBASIC-1.6□□□□□ -2.67
Retrieved 100 of 98,524 protein–RNA pairs in 176.3 ms