Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 RNU6-593P-201ENST00000364716 112 ntBASIC-6.56□□□□□ -3.46
TOP2AP11388 Y_RNA.590-201ENST00000410140 107 ntBASIC-6.56□□□□□ -3.46
TOP2AP11388 RNA5SP136-201ENST00000410906 107 ntBASIC-6.56□□□□□ -3.46
TOP2AP11388 Y_RNA.165-201ENST00000363721 102 ntBASIC-6.57□□□□□ -3.46
TOP2AP11388 Y_RNA.314-201ENST00000365114 102 ntBASIC-6.57□□□□□ -3.46
TOP2AP11388 RNU6-326P-201ENST00000365480 107 ntBASIC-6.57□□□□□ -3.46
TOP2AP11388 RNU6-770P-201ENST00000363929 105 ntBASIC-6.58□□□□□ -3.46
TOP2AP11388 MTND3P10-201ENST00000450967 341 ntBASIC-6.58□□□□□ -3.46
TOP2AP11388 AC124864.2-201ENST00000624736 186 ntBASIC-6.58□□□□□ -3.46
TOP2AP11388 Y_RNA.275-201ENST00000364726 110 ntBASIC-6.59□□□□□ -3.46
TOP2AP11388 RNU6-768P-201ENST00000384683 107 ntBASIC-6.59□□□□□ -3.46
TOP2AP11388 Z99129.1-201ENST00000612510 255 ntBASIC-6.6□□□□□ -3.47
TOP2AP11388 RNU6-1289P-201ENST00000384431 106 ntBASIC-6.6□□□□□ -3.47
TOP2AP11388 Y_RNA.682-201ENST00000516457 100 ntBASIC-6.6□□□□□ -3.47
TOP2AP11388 AC037487.3-201ENST00000606668 112 ntBASIC-6.6□□□□□ -3.47
TOP2AP11388 RNU6-835P-201ENST00000516974 104 ntBASIC-6.61□□□□□ -3.47
TOP2AP11388 MIR4317-201ENST00000637586 65 ntBASIC-6.61□□□□□ -3.47
TOP2AP11388 RNU6-916P-201ENST00000516088 109 ntBASIC-6.62□□□□□ -3.47
TOP2AP11388 RPS29P30-201ENST00000600975 111 ntBASIC-6.62□□□□□ -3.47
TOP2AP11388 Y_RNA.41-201ENST00000362646 102 ntBASIC-6.63□□□□□ -3.47
TOP2AP11388 MIR4777-201ENST00000583710 86 ntBASIC-6.63□□□□□ -3.47
TOP2AP11388 RNU6-92P-201ENST00000605893 104 ntBASIC-6.63□□□□□ -3.47
TOP2AP11388 MIR8053-201ENST00000613344 75 ntBASIC-6.63□□□□□ -3.47
TOP2AP11388 MIR1263-201ENST00000408324 86 ntBASIC-6.64□□□□□ -3.47
TOP2AP11388 Y_RNA.705-201ENST00000516862 110 ntBASIC-6.64□□□□□ -3.47
TOP2AP11388 RNU6-1192P-201ENST00000612197 107 ntBASIC-6.64□□□□□ -3.47
TOP2AP11388 RNU6-489P-201ENST00000618289 107 ntBASIC-6.64□□□□□ -3.47
TOP2AP11388 MTND5P5-201ENST00000503764 376 ntBASIC-6.65□□□□□ -3.47
TOP2AP11388 RNU6-1219P-201ENST00000516143 112 ntBASIC-6.65□□□□□ -3.47
TOP2AP11388 Y_RNA.686-201ENST00000516548 134 ntBASIC-6.65□□□□□ -3.47
TOP2AP11388 RNU6-303P-201ENST00000517091 106 ntBASIC-6.65□□□□□ -3.47
TOP2AP11388 RNU2-72P-201ENST00000411175 163 ntBASIC-6.66□□□□□ -3.47
TOP2AP11388 Y_RNA.609-201ENST00000410669 89 ntBASIC-6.66□□□□□ -3.48
TOP2AP11388 AL445567.1-201ENST00000439121 144 ntBASIC-6.66□□□□□ -3.48
TOP2AP11388 SNORD116-2-201ENST00000384274 95 ntBASIC-6.67□□□□□ -3.48
TOP2AP11388 AL603755.1-201ENST00000619504 163 ntBASIC-6.67□□□□□ -3.48
TOP2AP11388 RNU6-196P-201ENST00000384315 107 ntBASIC-6.68□□□□□ -3.48
TOP2AP11388 RNU6-1043P-201ENST00000410355 99 ntBASIC-6.68□□□□□ -3.48
TOP2AP11388 RNU6-402P-201ENST00000410678 103 ntBASIC-6.68□□□□□ -3.48
TOP2AP11388 RNU6-332P-201ENST00000391193 108 ntBASIC-6.69□□□□□ -3.48
TOP2AP11388 SNORA75.5-201ENST00000391291 81 ntBASIC-6.69□□□□□ -3.48
TOP2AP11388 Y_RNA.359-201ENST00000365498 102 ntBASIC-6.7□□□□□ -3.48
TOP2AP11388 RNU6-639P-201ENST00000384074 107 ntBASIC-6.7□□□□□ -3.48
TOP2AP11388 MIR545-201ENST00000385085 106 ntBASIC-6.7□□□□□ -3.48
TOP2AP11388 RNU6-1046P-201ENST00000516538 107 ntBASIC-6.7□□□□□ -3.48
TOP2AP11388 SNORA40.16-201ENST00000517238 121 ntBASIC-6.7□□□□□ -3.48
TOP2AP11388 Y_RNA.309-201ENST00000365046 111 ntBASIC-6.71□□□□□ -3.48
TOP2AP11388 RNU6-876P-201ENST00000391295 104 ntBASIC-6.71□□□□□ -3.48
TOP2AP11388 RNU6-419P-201ENST00000517030 63 ntBASIC-6.71□□□□□ -3.48
TOP2AP11388 RNU6-537P-201ENST00000517277 103 ntBASIC-6.71□□□□□ -3.48
TOP2AP11388 Y_RNA.201-201ENST00000364052 96 ntBASIC-6.72□□□□□ -3.49
TOP2AP11388 Y_RNA.202-201ENST00000364083 110 ntBASIC-6.72□□□□□ -3.49
TOP2AP11388 SNORD81.2-201ENST00000365153 76 ntBASIC-6.72□□□□□ -3.49
TOP2AP11388 RNU6-290P-201ENST00000365212 101 ntBASIC-6.72□□□□□ -3.49
TOP2AP11388 RNU6-972P-201ENST00000391208 107 ntBASIC-6.72□□□□□ -3.49
TOP2AP11388 AC074348.1-201ENST00000426503 132 ntBASIC-6.73□□□□□ -3.49
TOP2AP11388 RNU6-162P-201ENST00000516228 103 ntBASIC-6.73□□□□□ -3.49
TOP2AP11388 RNU6-267P-201ENST00000516714 103 ntBASIC-6.73□□□□□ -3.49
TOP2AP11388 MIR3149-201ENST00000584629 83 ntBASIC-6.73□□□□□ -3.49
TOP2AP11388 AP001318.4-201ENST00000616637 121 ntBASIC-6.73□□□□□ -3.49
TOP2AP11388 MIR6844-201ENST00000637122 62 ntBASIC-6.73□□□□□ -3.49
TOP2AP11388 SNORD60.1-201ENST00000362451 73 ntBASIC-6.74□□□□□ -3.49
TOP2AP11388 RNU6-130P-201ENST00000411112 103 ntBASIC-6.74□□□□□ -3.49
TOP2AP11388 Y_RNA.29-201ENST00000362570 113 ntBASIC-6.75□□□□□ -3.49
TOP2AP11388 RNU4ATAC7P-201ENST00000516280 125 ntBASIC-6.75□□□□□ -3.49
TOP2AP11388 MIR376A1-201ENST00000616574 68 ntBASIC-6.75□□□□□ -3.49
TOP2AP11388 MIR3121-201ENST00000579680 77 ntBASIC-6.76□□□□□ -3.49
TOP2AP11388 SNORD115-46-201ENST00000390982 71 ntBASIC-6.76□□□□□ -3.49
TOP2AP11388 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC-6.76□□□□□ -3.49
TOP2AP11388 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-6.77□□□□□ -3.49
TOP2AP11388 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-6.78□□□□□ -3.49
TOP2AP11388 AL160413.1-201ENST00000622780 310 ntBASIC-6.78□□□□□ -3.49
TOP2AP11388 AC090574.1-201ENST00000623186 233 ntBASIC-6.78□□□□□ -3.49
TOP2AP11388 RNU6-624P-201ENST00000363411 107 ntBASIC-6.79□□□□□ -3.5
TOP2AP11388 SNORD116-6-201ENST00000384711 96 ntBASIC-6.79□□□□□ -3.5
TOP2AP11388 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC-6.79□□□□□ -3.5
TOP2AP11388 Y_RNA.581-201ENST00000391017 97 ntBASIC-6.8□□□□□ -3.5
TOP2AP11388 SNORD2.1-201ENST00000458762 69 ntBASIC-6.8□□□□□ -3.5
TOP2AP11388 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC-6.8□□□□□ -3.5
TOP2AP11388 RNU6-795P-201ENST00000516323 103 ntBASIC-6.8□□□□□ -3.5
TOP2AP11388 Y_RNA.544-201ENST00000384650 113 ntBASIC-6.81□□□□□ -3.5
TOP2AP11388 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC-6.81□□□□□ -3.5
TOP2AP11388 SNORD45A-201ENST00000384512 84 ntBASIC-6.81□□□□□ -3.5
TOP2AP11388 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC-6.81□□□□□ -3.5
TOP2AP11388 MIR548P-201ENST00000408336 84 ntBASIC-6.81□□□□□ -3.5
TOP2AP11388 RNU6-887P-201ENST00000410660 100 ntBASIC-6.81□□□□□ -3.5
TOP2AP11388 SNORA63.4-201ENST00000362763 126 ntBASIC-6.83□□□□□ -3.5
TOP2AP11388 AC099799.1-201ENST00000439809 192 ntBASIC-6.83□□□□□ -3.5
TOP2AP11388 RNU6-542P-201ENST00000516405 103 ntBASIC-6.83□□□□□ -3.5
TOP2AP11388 MIR548AI-201ENST00000579940 88 ntBASIC-6.83□□□□□ -3.5
TOP2AP11388 RNU7-119P-201ENST00000459279 63 ntBASIC-6.84□□□□□ -3.5
TOP2AP11388 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC-6.84□□□□□ -3.5
TOP2AP11388 MIR519C-201ENST00000385053 87 ntBASIC-6.86□□□□□ -3.51
TOP2AP11388 MIR4272-201ENST00000635924 64 ntBASIC-6.86□□□□□ -3.51
TOP2AP11388 RNU6-379P-201ENST00000363813 104 ntBASIC-6.86□□□□□ -3.51
TOP2AP11388 SNORD116-10-201ENST00000363791 102 ntBASIC-6.87□□□□□ -3.51
TOP2AP11388 RNU6-776P-201ENST00000364403 104 ntBASIC-6.87□□□□□ -3.51
TOP2AP11388 RNU6-1022P-201ENST00000365049 104 ntBASIC-6.87□□□□□ -3.51
TOP2AP11388 AC093729.1-201ENST00000513074 128 ntBASIC-6.88□□□□□ -3.51
TOP2AP11388 Y_RNA.445-201ENST00000384168 102 ntBASIC-6.89□□□□□ -3.51
Retrieved 100 of 98,524 protein–RNA pairs in 273.3 ms