Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 Y_RNA.8-201ENST00000362353 102 ntBASIC-2.29□□□□□ -2.78
HLA-DQB2P05538 Y_RNA.180-201ENST00000363867 113 ntBASIC-2.29□□□□□ -2.78
HLA-DQB2P05538 Y_RNA.340-201ENST00000365330 92 ntBASIC-2.29□□□□□ -2.78
HLA-DQB2P05538 Y_RNA.413-201ENST00000384007 102 ntBASIC-2.29□□□□□ -2.78
HLA-DQB2P05538 RNU6-458P-201ENST00000384179 107 ntBASIC-2.29□□□□□ -2.78
HLA-DQB2P05538 Y_RNA.543-201ENST00000384649 107 ntBASIC-2.29□□□□□ -2.78
HLA-DQB2P05538 Y_RNA.754-201ENST00000476024 102 ntBASIC-2.29□□□□□ -2.78
HLA-DQB2P05538 Y_RNA.678-201ENST00000516408 96 ntBASIC-2.29□□□□□ -2.78
HLA-DQB2P05538 U6.58-201ENST00000613107 107 ntBASIC-2.29□□□□□ -2.78
HLA-DQB2P05538 Y_RNA.790-201ENST00000614282 102 ntBASIC-2.29□□□□□ -2.78
HLA-DQB2P05538 Y_RNA.782-201ENST00000614695 102 ntBASIC-2.29□□□□□ -2.78
HLA-DQB2P05538 RNU6-681P-201ENST00000364012 104 ntBASIC-2.3□□□□□ -2.78
HLA-DQB2P05538 SNORD115-27-201ENST00000364430 82 ntBASIC-2.3□□□□□ -2.78
HLA-DQB2P05538 Y_RNA.400-201ENST00000383963 111 ntBASIC-2.3□□□□□ -2.78
HLA-DQB2P05538 RNU6-79P-201ENST00000362511 107 ntBASIC-2.31□□□□□ -2.78
HLA-DQB2P05538 RNU6-704P-201ENST00000364162 103 ntBASIC-2.31□□□□□ -2.78
HLA-DQB2P05538 RNU6-394P-201ENST00000410735 107 ntBASIC-2.31□□□□□ -2.78
HLA-DQB2P05538 RNU7-153P-201ENST00000516455 62 ntBASIC-2.31□□□□□ -2.78
HLA-DQB2P05538 Y_RNA.223-201ENST00000364290 113 ntBASIC-2.32□□□□□ -2.78
HLA-DQB2P05538 RNU6-804P-201ENST00000384286 107 ntBASIC-2.32□□□□□ -2.78
HLA-DQB2P05538 RNU6-696P-201ENST00000390834 107 ntBASIC-2.32□□□□□ -2.78
HLA-DQB2P05538 RNU6-630P-201ENST00000391258 106 ntBASIC-2.32□□□□□ -2.78
HLA-DQB2P05538 SCARNA23-201ENST00000516060 130 ntBASIC-2.32□□□□□ -2.78
HLA-DQB2P05538 SNORD116-10-201ENST00000363791 102 ntBASIC-2.33□□□□□ -2.78
HLA-DQB2P05538 RNU6-645P-201ENST00000364649 106 ntBASIC-2.33□□□□□ -2.78
HLA-DQB2P05538 RNU6-426P-201ENST00000516464 97 ntBASIC-2.33□□□□□ -2.78
HLA-DQB2P05538 RNU6-608P-201ENST00000383927 104 ntBASIC-2.34□□□□□ -2.78
HLA-DQB2P05538 Y_RNA.398-201ENST00000383952 99 ntBASIC-2.34□□□□□ -2.78
HLA-DQB2P05538 MIR548A3-201ENST00000385297 97 ntBASIC-2.34□□□□□ -2.78
HLA-DQB2P05538 Y_RNA.525-201ENST00000384570 113 ntBASIC-2.35□□□□□ -2.79
HLA-DQB2P05538 RNU6-537P-201ENST00000517277 103 ntBASIC-2.35□□□□□ -2.79
HLA-DQB2P05538 Y_RNA.96-201ENST00000363092 109 ntBASIC-2.36□□□□□ -2.79
HLA-DQB2P05538 MIR487B-201ENST00000385021 84 ntBASIC-2.36□□□□□ -2.79
HLA-DQB2P05538 MTND4LP9-201ENST00000427694 174 ntBASIC-2.36□□□□□ -2.79
HLA-DQB2P05538 RNU7-107P-201ENST00000459121 61 ntBASIC-2.36□□□□□ -2.79
HLA-DQB2P05538 RNU6-1262P-201ENST00000516217 96 ntBASIC-2.36□□□□□ -2.79
HLA-DQB2P05538 SNORD77.2-201ENST00000391045 68 ntBASIC-2.37□□□□□ -2.79
HLA-DQB2P05538 MIR3144-201ENST00000579460 79 ntBASIC-2.37□□□□□ -2.79
HLA-DQB2P05538 Y_RNA.426-201ENST00000384068 113 ntBASIC-2.38□□□□□ -2.79
HLA-DQB2P05538 RNU6-738P-201ENST00000384531 106 ntBASIC-2.38□□□□□ -2.79
HLA-DQB2P05538 SNORD33.1-201ENST00000516213 88 ntBASIC-2.38□□□□□ -2.79
HLA-DQB2P05538 Y_RNA.175-201ENST00000363794 111 ntBASIC-2.39□□□□□ -2.79
HLA-DQB2P05538 MIR520D-201ENST00000385002 87 ntBASIC-2.39□□□□□ -2.79
HLA-DQB2P05538 U4.2-201ENST00000618561 85 ntBASIC-2.39□□□□□ -2.79
HLA-DQB2P05538 MIR429-201ENST00000362106 83 ntBASIC-2.4□□□□□ -2.79
HLA-DQB2P05538 Y_RNA.74-201ENST00000362911 99 ntBASIC-2.4□□□□□ -2.79
HLA-DQB2P05538 Y_RNA.103-201ENST00000363171 102 ntBASIC-2.4□□□□□ -2.79
HLA-DQB2P05538 Y_RNA.109-201ENST00000363215 102 ntBASIC-2.4□□□□□ -2.79
HLA-DQB2P05538 SNORD114-3-201ENST00000364969 75 ntBASIC-2.4□□□□□ -2.79
HLA-DQB2P05538 RNU6-904P-201ENST00000516206 101 ntBASIC-2.4□□□□□ -2.79
HLA-DQB2P05538 RNU6-574P-201ENST00000384265 107 ntBASIC-2.41□□□□□ -2.8
HLA-DQB2P05538 RNU6-1152P-201ENST00000384576 107 ntBASIC-2.41□□□□□ -2.8
HLA-DQB2P05538 RNU6-1211P-201ENST00000459179 105 ntBASIC-2.41□□□□□ -2.8
HLA-DQB2P05538 RNU7-61P-201ENST00000515897 61 ntBASIC-2.41□□□□□ -2.8
HLA-DQB2P05538 RNU7-174P-201ENST00000516248 59 ntBASIC-2.41□□□□□ -2.8
HLA-DQB2P05538 Y_RNA.55-201ENST00000362797 102 ntBASIC-2.42□□□□□ -2.8
HLA-DQB2P05538 Y_RNA.282-201ENST00000364793 102 ntBASIC-2.42□□□□□ -2.8
HLA-DQB2P05538 RNU6-867P-201ENST00000364956 107 ntBASIC-2.42□□□□□ -2.8
HLA-DQB2P05538 RNU6-695P-201ENST00000391157 104 ntBASIC-2.42□□□□□ -2.8
HLA-DQB2P05538 RNU6-1108P-201ENST00000516308 104 ntBASIC-2.42□□□□□ -2.8
HLA-DQB2P05538 MIR3914-2-201ENST00000637339 95 ntBASIC-2.42□□□□□ -2.8
HLA-DQB2P05538 RNU6-200P-201ENST00000364743 107 ntBASIC-2.43□□□□□ -2.8
HLA-DQB2P05538 Y_RNA.325-201ENST00000365171 122 ntBASIC-2.43□□□□□ -2.8
HLA-DQB2P05538 Y_RNA.489-201ENST00000384410 101 ntBASIC-2.43□□□□□ -2.8
HLA-DQB2P05538 MIR23C-201ENST00000579846 100 ntBASIC-2.43□□□□□ -2.8
HLA-DQB2P05538 RNU6-797P-201ENST00000363101 109 ntBASIC-2.44□□□□□ -2.8
HLA-DQB2P05538 Y_RNA.193-201ENST00000363979 102 ntBASIC-2.44□□□□□ -2.8
HLA-DQB2P05538 RNU6-598P-201ENST00000364017 105 ntBASIC-2.44□□□□□ -2.8
HLA-DQB2P05538 Y_RNA.281-201ENST00000364774 94 ntBASIC-2.44□□□□□ -2.8
HLA-DQB2P05538 SNORA40-201ENST00000388090 126 ntBASIC-2.44□□□□□ -2.8
HLA-DQB2P05538 RNU6-162P-201ENST00000516228 103 ntBASIC-2.44□□□□□ -2.8
HLA-DQB2P05538 MTND5P41-201ENST00000517498 206 ntBASIC-2.44□□□□□ -2.8
HLA-DQB2P05538 AC004792.1-201ENST00000614523 137 ntBASIC-2.44□□□□□ -2.8
HLA-DQB2P05538 RNY4P27-201ENST00000363341 96 ntBASIC-2.45□□□□□ -2.8
HLA-DQB2P05538 Y_RNA.375-201ENST00000365625 101 ntBASIC-2.45□□□□□ -2.8
HLA-DQB2P05538 Y_RNA.264-201ENST00000364665 102 ntBASIC-2.46□□□□□ -2.8
HLA-DQB2P05538 Y_RNA.502-201ENST00000384478 113 ntBASIC-2.46□□□□□ -2.8
HLA-DQB2P05538 AC120024.2-201ENST00000576526 175 ntBASIC-2.46□□□□□ -2.8
HLA-DQB2P05538 Y_RNA.812-201ENST00000610788 101 ntBASIC-2.46□□□□□ -2.8
HLA-DQB2P05538 Y_RNA.784-201ENST00000613803 101 ntBASIC-2.46□□□□□ -2.8
HLA-DQB2P05538 Y_RNA.787-201ENST00000616522 101 ntBASIC-2.46□□□□□ -2.8
HLA-DQB2P05538 Y_RNA.780-201ENST00000617336 101 ntBASIC-2.46□□□□□ -2.8
HLA-DQB2P05538 Y_RNA.801-201ENST00000619005 101 ntBASIC-2.46□□□□□ -2.8
HLA-DQB2P05538 SNORA63-201ENST00000363450 132 ntBASIC-2.47□□□□□ -2.8
HLA-DQB2P05538 Y_RNA.225-201ENST00000364326 97 ntBASIC-2.47□□□□□ -2.8
HLA-DQB2P05538 RNU6-587P-201ENST00000391282 106 ntBASIC-2.47□□□□□ -2.8
HLA-DQB2P05538 RNU6-1089P-201ENST00000516473 104 ntBASIC-2.47□□□□□ -2.8
HLA-DQB2P05538 U2.18-201ENST00000622185 84 ntBASIC-2.47□□□□□ -2.8
HLA-DQB2P05538 Y_RNA.190-201ENST00000363964 101 ntBASIC-2.48□□□□□ -2.81
HLA-DQB2P05538 RNU6-1107P-201ENST00000364817 104 ntBASIC-2.48□□□□□ -2.81
HLA-DQB2P05538 MIR519C-201ENST00000385053 87 ntBASIC-2.48□□□□□ -2.81
HLA-DQB2P05538 MIR4503-201ENST00000582187 83 ntBASIC-2.48□□□□□ -2.81
HLA-DQB2P05538 RNU6-228P-201ENST00000362700 106 ntBASIC-2.49□□□□□ -2.81
HLA-DQB2P05538 RNU6-880P-201ENST00000384526 107 ntBASIC-2.49□□□□□ -2.81
HLA-DQB2P05538 RNU6-1111P-201ENST00000391118 107 ntBASIC-2.49□□□□□ -2.81
HLA-DQB2P05538 RNU6-257P-201ENST00000410238 98 ntBASIC-2.49□□□□□ -2.81
HLA-DQB2P05538 Y_RNA.712-201ENST00000517011 92 ntBASIC-2.49□□□□□ -2.81
HLA-DQB2P05538 U7.3-201ENST00000616123 62 ntBASIC-2.49□□□□□ -2.81
HLA-DQB2P05538 U6.95-201ENST00000636931 70 ntBASIC-2.49□□□□□ -2.81
HLA-DQB2P05538 RNU6-563P-201ENST00000364872 108 ntBASIC-2.5□□□□□ -2.81
Retrieved 100 of 98,524 protein–RNA pairs in 261.2 ms