Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 MIR519C-201ENST00000385053 87 ntBASIC-1.37□□□□□ -2.63
GGPS1O95749 SNORD64-201ENST00000386683 67 ntBASIC-1.37□□□□□ -2.63
GGPS1O95749 MIR1255B2-201ENST00000408618 67 ntBASIC-1.37□□□□□ -2.63
GGPS1O95749 SNORD115-27-201ENST00000364430 82 ntBASIC-1.38□□□□□ -2.63
GGPS1O95749 Y_RNA.290-201ENST00000364879 114 ntBASIC-1.38□□□□□ -2.63
GGPS1O95749 RNU6-431P-201ENST00000383874 107 ntBASIC-1.38□□□□□ -2.63
GGPS1O95749 MTATP8P2-201ENST00000435212 202 ntBASIC-1.38□□□□□ -2.63
GGPS1O95749 CYP3A54P-201ENST00000566950 75 ntBASIC-1.38□□□□□ -2.63
GGPS1O95749 uc_338.19-201ENST00000616808 99 ntBASIC-1.38□□□□□ -2.63
GGPS1O95749 SNORD114-17-201ENST00000364699 75 ntBASIC-1.39□□□□□ -2.63
GGPS1O95749 Y_RNA.709-201ENST00000516952 92 ntBASIC-1.39□□□□□ -2.63
GGPS1O95749 AC140658.3-201ENST00000567603 271 ntBASIC-1.39□□□□□ -2.63
GGPS1O95749 MIR2052-201ENST00000636055 55 ntBASIC-1.39□□□□□ -2.63
GGPS1O95749 RNU6-340P-201ENST00000364005 107 ntBASIC-1.4□□□□□ -2.63
GGPS1O95749 MIR147A-201ENST00000385079 72 ntBASIC-1.4□□□□□ -2.63
GGPS1O95749 RNY1P9-201ENST00000532431 109 ntBASIC-1.4□□□□□ -2.63
GGPS1O95749 AL445584.3-201ENST00000617173 78 ntBASIC-1.4□□□□□ -2.63
GGPS1O95749 RNU6-681P-201ENST00000364012 104 ntBASIC-1.41□□□□□ -2.64
GGPS1O95749 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-1.41□□□□□ -2.64
GGPS1O95749 RNU6-479P-201ENST00000516348 105 ntBASIC-1.41□□□□□ -2.64
GGPS1O95749 MIR4499-201ENST00000584834 69 ntBASIC-1.41□□□□□ -2.64
GGPS1O95749 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC-1.41□□□□□ -2.64
GGPS1O95749 MIR6739-201ENST00000622461 75 ntBASIC-1.41□□□□□ -2.64
GGPS1O95749 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC-1.42□□□□□ -2.64
GGPS1O95749 SNORD77.2-201ENST00000391045 68 ntBASIC-1.42□□□□□ -2.64
GGPS1O95749 RNU6-1246P-201ENST00000391064 107 ntBASIC-1.42□□□□□ -2.64
GGPS1O95749 MIR6738-201ENST00000619620 64 ntBASIC-1.42□□□□□ -2.64
GGPS1O95749 MIR6888-201ENST00000621977 67 ntBASIC-1.42□□□□□ -2.64
GGPS1O95749 Y_RNA.244-201ENST00000364484 109 ntBASIC-1.43□□□□□ -2.64
GGPS1O95749 RNU6-1154P-201ENST00000391001 104 ntBASIC-1.43□□□□□ -2.64
GGPS1O95749 AL031737.1-201ENST00000450125 223 ntBASIC-1.43□□□□□ -2.64
GGPS1O95749 MIR378F-201ENST00000578143 78 ntBASIC-1.43□□□□□ -2.64
GGPS1O95749 MIR4324-201ENST00000584846 72 ntBASIC-1.43□□□□□ -2.64
GGPS1O95749 RNU6-313P-201ENST00000516317 112 ntBASIC-1.44□□□□□ -2.64
GGPS1O95749 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-1.44□□□□□ -2.64
GGPS1O95749 MIR382-201ENST00000637119 76 ntBASIC-1.44□□□□□ -2.64
GGPS1O95749 RNU6-24P-201ENST00000384440 107 ntBASIC-1.45□□□□□ -2.64
GGPS1O95749 RNU7-154P-201ENST00000516194 62 ntBASIC-1.45□□□□□ -2.64
GGPS1O95749 RNU6-633P-201ENST00000362612 103 ntBASIC-1.46□□□□□ -2.64
GGPS1O95749 SNORD115-37-201ENST00000363768 82 ntBASIC-1.46□□□□□ -2.64
GGPS1O95749 Y_RNA.264-201ENST00000364665 102 ntBASIC-1.46□□□□□ -2.64
GGPS1O95749 MIR587-201ENST00000384845 96 ntBASIC-1.46□□□□□ -2.64
GGPS1O95749 snoU83B.1-201ENST00000517136 88 ntBASIC-1.46□□□□□ -2.64
GGPS1O95749 MIR4668-201ENST00000582284 70 ntBASIC-1.47□□□□□ -2.64
GGPS1O95749 Y_RNA.457-201ENST00000384237 111 ntBASIC-1.48□□□□□ -2.65
GGPS1O95749 AL035461.1-201ENST00000421490 332 ntBASIC-1.49□□□□□ -2.65
GGPS1O95749 SCARNA18B-201ENST00000458806 135 ntBASIC-1.49□□□□□ -2.65
GGPS1O95749 MIR450A1-201ENST00000362262 91 ntBASIC-1.5□□□□□ -2.65
GGPS1O95749 RNU6-924P-201ENST00000362926 108 ntBASIC-1.5□□□□□ -2.65
GGPS1O95749 Y_RNA.273-201ENST00000364703 102 ntBASIC-1.5□□□□□ -2.65
GGPS1O95749 AC132825.6-201ENST00000638861 357 ntBASIC-1.5□□□□□ -2.65
GGPS1O95749 RNU6-1108P-201ENST00000516308 104 ntBASIC-1.51□□□□□ -2.65
GGPS1O95749 RNU6-10P-201ENST00000384036 107 ntBASIC-1.52□□□□□ -2.65
GGPS1O95749 Y_RNA.514-201ENST00000384528 112 ntBASIC-1.52□□□□□ -2.65
GGPS1O95749 Y_RNA.698-201ENST00000516798 118 ntBASIC-1.52□□□□□ -2.65
GGPS1O95749 MIR3910-1-201ENST00000580936 111 ntBASIC-1.52□□□□□ -2.65
GGPS1O95749 MIR519A2-201ENST00000384990 87 ntBASIC-1.53□□□□□ -2.65
GGPS1O95749 RNU2-51P-201ENST00000410708 197 ntBASIC-1.53□□□□□ -2.65
GGPS1O95749 SNORD57-201ENST00000448188 72 ntBASIC-1.53□□□□□ -2.65
GGPS1O95749 Y_RNA.583-201ENST00000391033 113 ntBASIC-1.54□□□□□ -2.66
GGPS1O95749 Y_RNA.620-201ENST00000411009 88 ntBASIC-1.54□□□□□ -2.66
GGPS1O95749 AL021921.1-201ENST00000442774 93 ntBASIC-1.54□□□□□ -2.66
GGPS1O95749 RNU6-518P-201ENST00000516056 96 ntBASIC-1.54□□□□□ -2.66
GGPS1O95749 SNORA40.13-201ENST00000516379 120 ntBASIC-1.54□□□□□ -2.66
GGPS1O95749 MIR4306-201ENST00000583390 91 ntBASIC-1.54□□□□□ -2.66
GGPS1O95749 AP001318.4-201ENST00000616637 121 ntBASIC-1.54□□□□□ -2.66
GGPS1O95749 RNU6-624P-201ENST00000363411 107 ntBASIC-1.55□□□□□ -2.66
GGPS1O95749 SNORD116-22-201ENST00000384430 92 ntBASIC-1.55□□□□□ -2.66
GGPS1O95749 RNY4P18-201ENST00000391107 89 ntBASIC-1.55□□□□□ -2.66
GGPS1O95749 AC093729.1-201ENST00000513074 128 ntBASIC-1.55□□□□□ -2.66
GGPS1O95749 MALAT1.1-201ENST00000618249 95 ntBASIC-1.56□□□□□ -2.66
GGPS1O95749 RNA5SP192-201ENST00000364404 120 ntBASIC-1.58□□□□□ -2.66
GGPS1O95749 SNORD113-1-201ENST00000365321 69 ntBASIC-1.59□□□□□ -2.66
GGPS1O95749 RNU6-656P-201ENST00000516785 107 ntBASIC-1.59□□□□□ -2.66
GGPS1O95749 RNU6-755P-201ENST00000364400 103 ntBASIC-1.6□□□□□ -2.67
GGPS1O95749 RNU6-219P-201ENST00000364728 107 ntBASIC-1.6□□□□□ -2.67
GGPS1O95749 RNU6-1325P-201ENST00000364905 105 ntBASIC-1.6□□□□□ -2.67
GGPS1O95749 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC-1.6□□□□□ -2.67
GGPS1O95749 MIR3115-201ENST00000577915 68 ntBASIC-1.6□□□□□ -2.67
GGPS1O95749 MIR3165-201ENST00000579874 75 ntBASIC-1.6□□□□□ -2.67
GGPS1O95749 Y_RNA.495-201ENST00000384435 112 ntBASIC-1.61□□□□□ -2.67
GGPS1O95749 RNU6-1157P-201ENST00000384456 106 ntBASIC-1.61□□□□□ -2.67
GGPS1O95749 SNORA26.4-201ENST00000391188 123 ntBASIC-1.61□□□□□ -2.67
GGPS1O95749 RNU6-497P-201ENST00000365316 104 ntBASIC-1.62□□□□□ -2.67
GGPS1O95749 Y_RNA.613-201ENST00000410726 97 ntBASIC-1.62□□□□□ -2.67
GGPS1O95749 SNX3P1X-201ENST00000414887 175 ntBASIC-1.62□□□□□ -2.67
GGPS1O95749 RNU6-557P-201ENST00000516842 110 ntBASIC-1.62□□□□□ -2.67
GGPS1O95749 RNU6-402P-201ENST00000410678 103 ntBASIC-1.63□□□□□ -2.67
GGPS1O95749 RNU6-1233P-201ENST00000362922 102 ntBASIC-1.64□□□□□ -2.67
GGPS1O95749 SNORD115-33-201ENST00000363723 82 ntBASIC-1.64□□□□□ -2.67
GGPS1O95749 SNORD63.1-201ENST00000516178 80 ntBASIC-1.64□□□□□ -2.67
GGPS1O95749 Y_RNA.629-201ENST00000411368 105 ntBASIC-1.65□□□□□ -2.67
GGPS1O95749 RNU6-807P-201ENST00000516805 107 ntBASIC-1.65□□□□□ -2.67
GGPS1O95749 RNU6-303P-201ENST00000517091 106 ntBASIC-1.65□□□□□ -2.67
GGPS1O95749 U2.7-201ENST00000619197 100 ntBASIC-1.65□□□□□ -2.67
GGPS1O95749 MIR548BB-201ENST00000626714 66 ntBASIC-1.65□□□□□ -2.67
GGPS1O95749 MIR4320-201ENST00000636981 65 ntBASIC-1.65□□□□□ -2.67
GGPS1O95749 RNU6-645P-201ENST00000364649 106 ntBASIC-1.66□□□□□ -2.68
GGPS1O95749 Y_RNA.348-201ENST00000365403 103 ntBASIC-1.66□□□□□ -2.68
GGPS1O95749 FAS-AS1.1-201ENST00000615327 126 ntBASIC-1.66□□□□□ -2.68
Retrieved 100 of 98,524 protein–RNA pairs in 170.6 ms