Protein–RNA interactions for Protein: O95025

SEMA3D, Semaphorin-3D, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3DO95025 Y_RNA.281-201ENST00000364774 94 ntBASIC-1.31□□□□□ -2.62
SEMA3DO95025 RNU6-80P-201ENST00000384195 107 ntBASIC-1.31□□□□□ -2.62
SEMA3DO95025 SCARNA23-201ENST00000516060 130 ntBASIC-1.31□□□□□ -2.62
SEMA3DO95025 snoU83B.1-201ENST00000517136 88 ntBASIC-1.31□□□□□ -2.62
SEMA3DO95025 Y_RNA.250-201ENST00000364542 110 ntBASIC-1.32□□□□□ -2.62
SEMA3DO95025 RNU6-119P-201ENST00000364882 107 ntBASIC-1.32□□□□□ -2.62
SEMA3DO95025 Y_RNA.586-201ENST00000391146 98 ntBASIC-1.32□□□□□ -2.62
SEMA3DO95025 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-1.32□□□□□ -2.62
SEMA3DO95025 RNU6-887P-201ENST00000410660 100 ntBASIC-1.32□□□□□ -2.62
SEMA3DO95025 DLEU2_3.2-201ENST00000612883 73 ntBASIC-1.32□□□□□ -2.62
SEMA3DO95025 RNA5SP93-201ENST00000362525 114 ntBASIC-1.33□□□□□ -2.62
SEMA3DO95025 SNORD18.1-201ENST00000363807 70 ntBASIC-1.33□□□□□ -2.62
SEMA3DO95025 Y_RNA.558-201ENST00000384685 113 ntBASIC-1.33□□□□□ -2.62
SEMA3DO95025 RNU6-479P-201ENST00000516348 105 ntBASIC-1.33□□□□□ -2.62
SEMA3DO95025 RNU6-659P-201ENST00000516454 104 ntBASIC-1.33□□□□□ -2.62
SEMA3DO95025 RNU6-1107P-201ENST00000364817 104 ntBASIC-1.34□□□□□ -2.62
SEMA3DO95025 Y_RNA.506-201ENST00000384494 102 ntBASIC-1.34□□□□□ -2.62
SEMA3DO95025 RNU6-904P-201ENST00000516206 101 ntBASIC-1.34□□□□□ -2.62
SEMA3DO95025 RNU6-412P-201ENST00000516434 106 ntBASIC-1.34□□□□□ -2.62
SEMA3DO95025 RNU6-255P-201ENST00000516957 105 ntBASIC-1.34□□□□□ -2.62
SEMA3DO95025 MIR4796-201ENST00000580742 81 ntBASIC-1.34□□□□□ -2.62
SEMA3DO95025 U6.81-201ENST00000612550 106 ntBASIC-1.34□□□□□ -2.62
SEMA3DO95025 AC132825.6-201ENST00000638861 357 ntBASIC-1.34□□□□□ -2.62
SEMA3DO95025 RNU6-228P-201ENST00000362700 106 ntBASIC-1.35□□□□□ -2.63
SEMA3DO95025 Y_RNA.218-201ENST00000364218 104 ntBASIC-1.35□□□□□ -2.63
SEMA3DO95025 Y_RNA.403-201ENST00000383977 101 ntBASIC-1.35□□□□□ -2.63
SEMA3DO95025 Y_RNA.464-201ENST00000384282 110 ntBASIC-1.35□□□□□ -2.63
SEMA3DO95025 Y_RNA.609-201ENST00000410669 89 ntBASIC-1.35□□□□□ -2.63
SEMA3DO95025 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC-1.35□□□□□ -2.63
SEMA3DO95025 Y_RNA.698-201ENST00000516798 118 ntBASIC-1.35□□□□□ -2.63
SEMA3DO95025 MIR4719-201ENST00000585233 84 ntBASIC-1.35□□□□□ -2.63
SEMA3DO95025 RNU6-924P-201ENST00000362926 108 ntBASIC-1.36□□□□□ -2.63
SEMA3DO95025 Y_RNA.421-201ENST00000384052 101 ntBASIC-1.36□□□□□ -2.63
SEMA3DO95025 RNU2-51P-201ENST00000410708 197 ntBASIC-1.36□□□□□ -2.63
SEMA3DO95025 Y_RNA.71-201ENST00000362892 104 ntBASIC-1.37□□□□□ -2.63
SEMA3DO95025 RNU6-1212P-201ENST00000517023 104 ntBASIC-1.37□□□□□ -2.63
SEMA3DO95025 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-1.37□□□□□ -2.63
SEMA3DO95025 RNU6-1233P-201ENST00000362922 102 ntBASIC-1.38□□□□□ -2.63
SEMA3DO95025 SNORD116-10-201ENST00000363791 102 ntBASIC-1.38□□□□□ -2.63
SEMA3DO95025 MIR521-2-201ENST00000384818 87 ntBASIC-1.38□□□□□ -2.63
SEMA3DO95025 RNA5SP86-201ENST00000390869 98 ntBASIC-1.38□□□□□ -2.63
SEMA3DO95025 Y_RNA.204-201ENST00000364112 102 ntBASIC-1.39□□□□□ -2.63
SEMA3DO95025 RNY1P5-201ENST00000383890 115 ntBASIC-1.39□□□□□ -2.63
SEMA3DO95025 SNORD116-21-201ENST00000384507 92 ntBASIC-1.39□□□□□ -2.63
SEMA3DO95025 RNU6-907P-201ENST00000390924 102 ntBASIC-1.39□□□□□ -2.63
SEMA3DO95025 RNU7-61P-201ENST00000515897 61 ntBASIC-1.39□□□□□ -2.63
SEMA3DO95025 MIR6502-201ENST00000617296 76 ntBASIC-1.39□□□□□ -2.63
SEMA3DO95025 Y_RNA.96-201ENST00000363092 109 ntBASIC-1.4□□□□□ -2.63
SEMA3DO95025 MIR487B-201ENST00000385021 84 ntBASIC-1.4□□□□□ -2.63
SEMA3DO95025 MIR1236-201ENST00000408340 102 ntBASIC-1.4□□□□□ -2.63
SEMA3DO95025 SNORD63.1-201ENST00000516178 80 ntBASIC-1.4□□□□□ -2.63
SEMA3DO95025 RNU7-153P-201ENST00000516455 62 ntBASIC-1.4□□□□□ -2.63
SEMA3DO95025 RNU6-746P-201ENST00000384112 109 ntBASIC-1.41□□□□□ -2.64
SEMA3DO95025 MIR519A2-201ENST00000384990 87 ntBASIC-1.41□□□□□ -2.64
SEMA3DO95025 Y_RNA.284-201ENST00000364806 102 ntBASIC-1.42□□□□□ -2.64
SEMA3DO95025 MIR590-201ENST00000385008 97 ntBASIC-1.42□□□□□ -2.64
SEMA3DO95025 MIR527-201ENST00000385244 85 ntBASIC-1.42□□□□□ -2.64
SEMA3DO95025 SNORA26.4-201ENST00000391188 123 ntBASIC-1.42□□□□□ -2.64
SEMA3DO95025 Y_RNA.606-201ENST00000410579 103 ntBASIC-1.42□□□□□ -2.64
SEMA3DO95025 RNU6-537P-201ENST00000517277 103 ntBASIC-1.42□□□□□ -2.64
SEMA3DO95025 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC-1.42□□□□□ -2.64
SEMA3DO95025 AL450471.1-201ENST00000447509 127 ntBASIC-1.43□□□□□ -2.64
SEMA3DO95025 RNU6-518P-201ENST00000516056 96 ntBASIC-1.43□□□□□ -2.64
SEMA3DO95025 RNU7-154P-201ENST00000516194 62 ntBASIC-1.43□□□□□ -2.64
SEMA3DO95025 RNU6-162P-201ENST00000516228 103 ntBASIC-1.43□□□□□ -2.64
SEMA3DO95025 MIR6739-201ENST00000622461 75 ntBASIC-1.43□□□□□ -2.64
SEMA3DO95025 AC091912.2-201ENST00000624798 167 ntBASIC-1.43□□□□□ -2.64
SEMA3DO95025 SNORD115-33-201ENST00000363723 82 ntBASIC-1.44□□□□□ -2.64
SEMA3DO95025 MIR548H1-201ENST00000408610 102 ntBASIC-1.44□□□□□ -2.64
SEMA3DO95025 RNU6ATAC32P-201ENST00000516026 76 ntBASIC-1.44□□□□□ -2.64
SEMA3DO95025 RNU6-980P-201ENST00000516925 103 ntBASIC-1.44□□□□□ -2.64
SEMA3DO95025 MIR6874-201ENST00000635894 71 ntBASIC-1.44□□□□□ -2.64
SEMA3DO95025 RNU6-704P-201ENST00000364162 103 ntBASIC-1.45□□□□□ -2.64
SEMA3DO95025 RNY4P7-201ENST00000364600 96 ntBASIC-1.45□□□□□ -2.64
SEMA3DO95025 RNU6-1113P-201ENST00000384348 107 ntBASIC-1.45□□□□□ -2.64
SEMA3DO95025 MIR3139-201ENST00000579145 76 ntBASIC-1.45□□□□□ -2.64
SEMA3DO95025 SNORD116-14-201ENST00000383894 92 ntBASIC-1.46□□□□□ -2.64
SEMA3DO95025 SNORD116-17-201ENST00000383929 92 ntBASIC-1.46□□□□□ -2.64
SEMA3DO95025 SNORD116-15-201ENST00000384445 92 ntBASIC-1.46□□□□□ -2.64
SEMA3DO95025 SNORD116-19-201ENST00000384729 92 ntBASIC-1.46□□□□□ -2.64
SEMA3DO95025 MIR29B1-201ENST00000385015 81 ntBASIC-1.46□□□□□ -2.64
SEMA3DO95025 MIR4756-201ENST00000577874 78 ntBASIC-1.46□□□□□ -2.64
SEMA3DO95025 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-1.46□□□□□ -2.64
SEMA3DO95025 SNORD115-22-201ENST00000364456 82 ntBASIC-1.47□□□□□ -2.64
SEMA3DO95025 MIR1302-5-201ENST00000408164 150 ntBASIC-1.47□□□□□ -2.64
SEMA3DO95025 Y_RNA.613-201ENST00000410726 97 ntBASIC-1.47□□□□□ -2.64
SEMA3DO95025 RNU6-109P-201ENST00000516364 107 ntBASIC-1.47□□□□□ -2.64
SEMA3DO95025 RNU6-752P-201ENST00000516376 102 ntBASIC-1.47□□□□□ -2.64
SEMA3DO95025 RNU6-184P-201ENST00000516514 107 ntBASIC-1.47□□□□□ -2.64
SEMA3DO95025 AC090425.1-201ENST00000610007 140 ntBASIC-1.47□□□□□ -2.64
SEMA3DO95025 U7.3-201ENST00000616123 62 ntBASIC-1.47□□□□□ -2.64
SEMA3DO95025 Y_RNA.107-201ENST00000363190 121 ntBASIC-1.48□□□□□ -2.65
SEMA3DO95025 RNU6-340P-201ENST00000364005 107 ntBASIC-1.48□□□□□ -2.65
SEMA3DO95025 SNORD54-201ENST00000459159 67 ntBASIC-1.48□□□□□ -2.65
SEMA3DO95025 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC-1.48□□□□□ -2.65
SEMA3DO95025 SNORD115-27-201ENST00000364430 82 ntBASIC-1.49□□□□□ -2.65
SEMA3DO95025 RNU6-1333P-201ENST00000516162 93 ntBASIC-1.49□□□□□ -2.65
SEMA3DO95025 FAS-AS1.1-201ENST00000615327 126 ntBASIC-1.49□□□□□ -2.65
SEMA3DO95025 AL021921.1-201ENST00000442774 93 ntBASIC-1.5□□□□□ -2.65
SEMA3DO95025 AC108019.1-201ENST00000512540 175 ntBASIC-1.5□□□□□ -2.65
Retrieved 100 of 98,524 protein–RNA pairs in 184.2 ms