Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 RNU6-980P-201ENST00000516925 103 ntBASIC-2.59□□□□□ -2.82
TRAV27A0A087WT01 MIR5009-201ENST00000578736 100 ntBASIC-2.59□□□□□ -2.82
TRAV27A0A087WT01 MIR3144-201ENST00000579460 79 ntBASIC-2.59□□□□□ -2.82
TRAV27A0A087WT01 Y_RNA.778-201ENST00000620203 90 ntBASIC-2.59□□□□□ -2.82
TRAV27A0A087WT01 Y_RNA.272-201ENST00000364696 102 ntBASIC-2.6□□□□□ -2.83
TRAV27A0A087WT01 RNU7-174P-201ENST00000516248 59 ntBASIC-2.6□□□□□ -2.83
TRAV27A0A087WT01 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-2.6□□□□□ -2.83
TRAV27A0A087WT01 Y_RNA.190-201ENST00000363964 101 ntBASIC-2.61□□□□□ -2.83
TRAV27A0A087WT01 RNU6-258P-201ENST00000390884 101 ntBASIC-2.61□□□□□ -2.83
TRAV27A0A087WT01 MIR1236-201ENST00000408340 102 ntBASIC-2.61□□□□□ -2.83
TRAV27A0A087WT01 Y_RNA.705-201ENST00000516862 110 ntBASIC-2.61□□□□□ -2.83
TRAV27A0A087WT01 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-2.61□□□□□ -2.83
TRAV27A0A087WT01 Y_RNA.11-201ENST00000362375 109 ntBASIC-2.62□□□□□ -2.83
TRAV27A0A087WT01 Y_RNA.325-201ENST00000365171 122 ntBASIC-2.62□□□□□ -2.83
TRAV27A0A087WT01 RNU6-1034P-201ENST00000365335 101 ntBASIC-2.62□□□□□ -2.83
TRAV27A0A087WT01 RNU6-1111P-201ENST00000391118 107 ntBASIC-2.62□□□□□ -2.83
TRAV27A0A087WT01 RNU6-972P-201ENST00000391208 107 ntBASIC-2.62□□□□□ -2.83
TRAV27A0A087WT01 Y_RNA.619-201ENST00000410951 90 ntBASIC-2.62□□□□□ -2.83
TRAV27A0A087WT01 RNU6-861P-201ENST00000516745 106 ntBASIC-2.62□□□□□ -2.83
TRAV27A0A087WT01 AC072026.1-201ENST00000605023 201 ntBASIC-2.62□□□□□ -2.83
TRAV27A0A087WT01 U2.18-201ENST00000622185 84 ntBASIC-2.62□□□□□ -2.83
TRAV27A0A087WT01 Y_RNA.449-201ENST00000384187 102 ntBASIC-2.63□□□□□ -2.83
TRAV27A0A087WT01 Y_RNA.609-201ENST00000410669 89 ntBASIC-2.63□□□□□ -2.83
TRAV27A0A087WT01 Y_RNA.630-201ENST00000411370 108 ntBASIC-2.63□□□□□ -2.83
TRAV27A0A087WT01 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC-2.63□□□□□ -2.83
TRAV27A0A087WT01 Y_RNA.228-201ENST00000364346 98 ntBASIC-2.64□□□□□ -2.83
TRAV27A0A087WT01 Y_RNA.240-201ENST00000364469 95 ntBASIC-2.64□□□□□ -2.83
TRAV27A0A087WT01 Y_RNA.478-201ENST00000384358 107 ntBASIC-2.64□□□□□ -2.83
TRAV27A0A087WT01 RNU6-887P-201ENST00000410660 100 ntBASIC-2.64□□□□□ -2.83
TRAV27A0A087WT01 RNU7-153P-201ENST00000516455 62 ntBASIC-2.64□□□□□ -2.83
TRAV27A0A087WT01 RNU6-118P-201ENST00000516552 102 ntBASIC-2.64□□□□□ -2.83
TRAV27A0A087WT01 RNU6-111P-201ENST00000517179 105 ntBASIC-2.64□□□□□ -2.83
TRAV27A0A087WT01 Y_RNA.781-201ENST00000620301 103 ntBASIC-2.64□□□□□ -2.83
TRAV27A0A087WT01 Y_RNA.509-201ENST00000384506 99 ntBASIC-2.65□□□□□ -2.83
TRAV27A0A087WT01 RNU6-587P-201ENST00000391282 106 ntBASIC-2.65□□□□□ -2.83
TRAV27A0A087WT01 RNU4-88P-201ENST00000411220 86 ntBASIC-2.65□□□□□ -2.83
TRAV27A0A087WT01 MIR3170-201ENST00000582699 77 ntBASIC-2.65□□□□□ -2.83
TRAV27A0A087WT01 Y_RNA.460-201ENST00000384255 102 ntBASIC-2.66□□□□□ -2.84
TRAV27A0A087WT01 MIR3128-201ENST00000581957 66 ntBASIC-2.66□□□□□ -2.84
TRAV27A0A087WT01 RNU4-40P-201ENST00000364351 143 ntBASIC-2.67□□□□□ -2.84
TRAV27A0A087WT01 RNU6-1227P-201ENST00000383981 107 ntBASIC-2.67□□□□□ -2.84
TRAV27A0A087WT01 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-2.67□□□□□ -2.84
TRAV27A0A087WT01 Y_RNA.350-201ENST00000365409 98 ntBASIC-2.68□□□□□ -2.84
TRAV27A0A087WT01 SNORD77.2-201ENST00000391045 68 ntBASIC-2.68□□□□□ -2.84
TRAV27A0A087WT01 SNORD116-10-201ENST00000363791 102 ntBASIC-2.69□□□□□ -2.84
TRAV27A0A087WT01 MIR548F4-201ENST00000408515 105 ntBASIC-2.69□□□□□ -2.84
TRAV27A0A087WT01 RNU6-1267P-201ENST00000410747 107 ntBASIC-2.69□□□□□ -2.84
TRAV27A0A087WT01 MIR548X2-201ENST00000579776 100 ntBASIC-2.69□□□□□ -2.84
TRAV27A0A087WT01 RNU6-247P-201ENST00000362636 107 ntBASIC-2.7□□□□□ -2.84
TRAV27A0A087WT01 RNU6-772P-201ENST00000516042 105 ntBASIC-2.7□□□□□ -2.84
TRAV27A0A087WT01 Y_RNA.680-201ENST00000516441 93 ntBASIC-2.7□□□□□ -2.84
TRAV27A0A087WT01 RNU6-1089P-201ENST00000516473 104 ntBASIC-2.7□□□□□ -2.84
TRAV27A0A087WT01 RNU6-537P-201ENST00000517277 103 ntBASIC-2.7□□□□□ -2.84
TRAV27A0A087WT01 AL157777.2-201ENST00000258070 137 ntBASIC-2.71□□□□□ -2.84
TRAV27A0A087WT01 Y_RNA.649-201ENST00000459077 103 ntBASIC-2.71□□□□□ -2.84
TRAV27A0A087WT01 Y_RNA.699-201ENST00000516803 93 ntBASIC-2.71□□□□□ -2.84
TRAV27A0A087WT01 Y_RNA.720-201ENST00000517166 92 ntBASIC-2.71□□□□□ -2.84
TRAV27A0A087WT01 RNU6-194P-201ENST00000363862 105 ntBASIC-2.72□□□□□ -2.84
TRAV27A0A087WT01 Y_RNA.211-201ENST00000364164 101 ntBASIC-2.72□□□□□ -2.84
TRAV27A0A087WT01 SNORD116-18-201ENST00000383961 92 ntBASIC-2.72□□□□□ -2.84
TRAV27A0A087WT01 Y_RNA.459-201ENST00000384251 102 ntBASIC-2.72□□□□□ -2.84
TRAV27A0A087WT01 U4.4-201ENST00000620626 117 ntBASIC-2.72□□□□□ -2.84
TRAV27A0A087WT01 RNU6-766P-201ENST00000362478 107 ntBASIC-2.73□□□□□ -2.85
TRAV27A0A087WT01 Y_RNA.47-201ENST00000362697 108 ntBASIC-2.73□□□□□ -2.85
TRAV27A0A087WT01 RNU6-698P-201ENST00000363523 107 ntBASIC-2.73□□□□□ -2.85
TRAV27A0A087WT01 RNU6-682P-201ENST00000363843 106 ntBASIC-2.73□□□□□ -2.85
TRAV27A0A087WT01 RNU6-34P-201ENST00000364874 107 ntBASIC-2.73□□□□□ -2.85
TRAV27A0A087WT01 MIR548AA1-201ENST00000384971 97 ntBASIC-2.73□□□□□ -2.85
TRAV27A0A087WT01 Y_RNA.591-201ENST00000410228 104 ntBASIC-2.73□□□□□ -2.85
TRAV27A0A087WT01 Y_RNA.662-201ENST00000516028 97 ntBASIC-2.73□□□□□ -2.85
TRAV27A0A087WT01 SCARNA23-201ENST00000516060 130 ntBASIC-2.73□□□□□ -2.85
TRAV27A0A087WT01 RNA5SP405-201ENST00000363059 114 ntBASIC-2.74□□□□□ -2.85
TRAV27A0A087WT01 Y_RNA.96-201ENST00000363092 109 ntBASIC-2.74□□□□□ -2.85
TRAV27A0A087WT01 SNORA20.1-201ENST00000364790 130 ntBASIC-2.74□□□□□ -2.85
TRAV27A0A087WT01 RNU6-1023P-201ENST00000516137 106 ntBASIC-2.74□□□□□ -2.85
TRAV27A0A087WT01 RNU6-1108P-201ENST00000516308 104 ntBASIC-2.74□□□□□ -2.85
TRAV27A0A087WT01 SNORD54-201ENST00000459159 67 ntBASIC-2.75□□□□□ -2.85
TRAV27A0A087WT01 MIR548S-201ENST00000581352 82 ntBASIC-2.75□□□□□ -2.85
TRAV27A0A087WT01 SNORD19B.1-201ENST00000630615 80 ntBASIC-2.75□□□□□ -2.85
TRAV27A0A087WT01 AC013734.1-201ENST00000619329 111 ntBASIC-2.76□□□□□ -2.85
TRAV27A0A087WT01 Y_RNA.264-201ENST00000364665 102 ntBASIC-2.77□□□□□ -2.85
TRAV27A0A087WT01 MIR569-201ENST00000385228 96 ntBASIC-2.77□□□□□ -2.85
TRAV27A0A087WT01 Y_RNA.580-201ENST00000391004 95 ntBASIC-2.77□□□□□ -2.85
TRAV27A0A087WT01 U6.97-201ENST00000636904 101 ntBASIC-2.77□□□□□ -2.85
TRAV27A0A087WT01 RNU6-982P-201ENST00000516216 102 ntBASIC-2.78□□□□□ -2.85
TRAV27A0A087WT01 Y_RNA.668-201ENST00000516233 93 ntBASIC-2.78□□□□□ -2.85
TRAV27A0A087WT01 MIR548V-201ENST00000584165 80 ntBASIC-2.78□□□□□ -2.85
TRAV27A0A087WT01 RNU6-604P-201ENST00000390917 100 ntBASIC-2.79□□□□□ -2.86
TRAV27A0A087WT01 Y_RNA.149-201ENST00000363558 117 ntBASIC-2.8□□□□□ -2.86
TRAV27A0A087WT01 Y_RNA.297-201ENST00000364950 91 ntBASIC-2.8□□□□□ -2.86
TRAV27A0A087WT01 SNORD115-31-201ENST00000365318 82 ntBASIC-2.8□□□□□ -2.86
TRAV27A0A087WT01 RNU6-574P-201ENST00000384265 107 ntBASIC-2.8□□□□□ -2.86
TRAV27A0A087WT01 RNU6-1081P-201ENST00000384537 107 ntBASIC-2.8□□□□□ -2.86
TRAV27A0A087WT01 RNU6-904P-201ENST00000516206 101 ntBASIC-2.8□□□□□ -2.86
TRAV27A0A087WT01 Y_RNA.564-201ENST00000384708 106 ntBASIC-2.81□□□□□ -2.86
TRAV27A0A087WT01 snoU13.10-201ENST00000459301 103 ntBASIC-2.81□□□□□ -2.86
TRAV27A0A087WT01 RNU7-61P-201ENST00000515897 61 ntBASIC-2.81□□□□□ -2.86
TRAV27A0A087WT01 Y_RNA.701-201ENST00000516812 110 ntBASIC-2.81□□□□□ -2.86
TRAV27A0A087WT01 AL117187.1-201ENST00000555482 181 ntBASIC-2.81□□□□□ -2.86
TRAV27A0A087WT01 MIR3675-201ENST00000583661 73 ntBASIC-2.81□□□□□ -2.86
Retrieved 100 of 98,524 protein–RNA pairs in 167.2 ms