Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
AP4S1Q9Y587 CEP83-AS1-201ENST00000623122 2482 ntBASIC17.79■□□□□ 0.44
AP4S1Q9Y587 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
AP4S1Q9Y587 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
AP4S1Q9Y587 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC17.79■□□□□ 0.44
AP4S1Q9Y587 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
AP4S1Q9Y587 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
AP4S1Q9Y587 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
AP4S1Q9Y587 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
AP4S1Q9Y587 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
AP4S1Q9Y587 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
AP4S1Q9Y587 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
AP4S1Q9Y587 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC17.79■□□□□ 0.44
AP4S1Q9Y587 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC17.79■□□□□ 0.44
AP4S1Q9Y587 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC17.79■□□□□ 0.44
AP4S1Q9Y587 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
AP4S1Q9Y587 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC17.79■□□□□ 0.44
AP4S1Q9Y587 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
AP4S1Q9Y587 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
AP4S1Q9Y587 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
AP4S1Q9Y587 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
AP4S1Q9Y587 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
AP4S1Q9Y587 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
AP4S1Q9Y587 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC17.79■□□□□ 0.44
AP4S1Q9Y587 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
AP4S1Q9Y587 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
AP4S1Q9Y587 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
AP4S1Q9Y587 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
AP4S1Q9Y587 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
AP4S1Q9Y587 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
AP4S1Q9Y587 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC17.78■□□□□ 0.44
AP4S1Q9Y587 AC135776.1-201ENST00000319817 2481 ntBASIC17.78■□□□□ 0.44
AP4S1Q9Y587 NXN-202ENST00000537628 1340 ntTSL 3 BASIC17.78■□□□□ 0.44
AP4S1Q9Y587 GOLGA6L3-201ENST00000507199 1679 ntBASIC17.78■□□□□ 0.44
AP4S1Q9Y587 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
AP4S1Q9Y587 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
AP4S1Q9Y587 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
AP4S1Q9Y587 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC17.78■□□□□ 0.44
AP4S1Q9Y587 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
AP4S1Q9Y587 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC17.78■□□□□ 0.44
AP4S1Q9Y587 SLC25A6P5-201ENST00000435663 894 ntBASIC17.78■□□□□ 0.44
AP4S1Q9Y587 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
AP4S1Q9Y587 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC17.78■□□□□ 0.44
AP4S1Q9Y587 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
AP4S1Q9Y587 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
AP4S1Q9Y587 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
AP4S1Q9Y587 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
AP4S1Q9Y587 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
AP4S1Q9Y587 AC068338.2-201ENST00000563278 1430 ntBASIC17.78■□□□□ 0.44
AP4S1Q9Y587 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
AP4S1Q9Y587 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
AP4S1Q9Y587 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC17.78■□□□□ 0.44
AP4S1Q9Y587 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
AP4S1Q9Y587 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC17.78■□□□□ 0.44
AP4S1Q9Y587 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
AP4S1Q9Y587 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
AP4S1Q9Y587 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
AP4S1Q9Y587 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
AP4S1Q9Y587 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
AP4S1Q9Y587 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
AP4S1Q9Y587 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC17.77■□□□□ 0.44
AP4S1Q9Y587 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC17.77■□□□□ 0.44
AP4S1Q9Y587 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC17.77■□□□□ 0.44
AP4S1Q9Y587 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
AP4S1Q9Y587 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC17.77■□□□□ 0.44
AP4S1Q9Y587 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
AP4S1Q9Y587 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
AP4S1Q9Y587 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
AP4S1Q9Y587 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC17.77■□□□□ 0.44
AP4S1Q9Y587 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC17.77■□□□□ 0.44
AP4S1Q9Y587 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
AP4S1Q9Y587 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
AP4S1Q9Y587 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC17.77■□□□□ 0.44
AP4S1Q9Y587 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
AP4S1Q9Y587 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC17.77■□□□□ 0.44
AP4S1Q9Y587 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.44
AP4S1Q9Y587 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC17.77■□□□□ 0.44
AP4S1Q9Y587 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC17.77■□□□□ 0.44
AP4S1Q9Y587 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
AP4S1Q9Y587 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
AP4S1Q9Y587 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
AP4S1Q9Y587 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
AP4S1Q9Y587 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC17.77■□□□□ 0.43
AP4S1Q9Y587 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
AP4S1Q9Y587 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.43
AP4S1Q9Y587 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC17.77■□□□□ 0.43
AP4S1Q9Y587 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
AP4S1Q9Y587 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
AP4S1Q9Y587 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
AP4S1Q9Y587 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
AP4S1Q9Y587 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC17.76■□□□□ 0.43
AP4S1Q9Y587 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
AP4S1Q9Y587 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC17.76■□□□□ 0.43
AP4S1Q9Y587 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
AP4S1Q9Y587 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
AP4S1Q9Y587 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
AP4S1Q9Y587 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC17.76■□□□□ 0.43
AP4S1Q9Y587 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
AP4S1Q9Y587 SERP1-205ENST00000487153 657 ntTSL 4 BASIC17.76■□□□□ 0.43
AP4S1Q9Y587 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms