Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
VTA1Q9NP79 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC21.05■□□□□ 0.96
VTA1Q9NP79 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
VTA1Q9NP79 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC21.05■□□□□ 0.96
VTA1Q9NP79 IL11-204ENST00000590625 1028 ntTSL 2 BASIC21.05■□□□□ 0.96
VTA1Q9NP79 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
VTA1Q9NP79 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC21.05■□□□□ 0.96
VTA1Q9NP79 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
VTA1Q9NP79 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC21.05■□□□□ 0.96
VTA1Q9NP79 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
VTA1Q9NP79 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
VTA1Q9NP79 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
VTA1Q9NP79 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
VTA1Q9NP79 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
VTA1Q9NP79 FP475955.4-201ENST00000623131 1990 ntBASIC21.05■□□□□ 0.96
VTA1Q9NP79 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
VTA1Q9NP79 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
VTA1Q9NP79 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
VTA1Q9NP79 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
VTA1Q9NP79 BAALC-202ENST00000306391 243 ntTSL 5 BASIC21.04■□□□□ 0.96
VTA1Q9NP79 BAALC-204ENST00000330955 222 ntTSL 5 BASIC21.04■□□□□ 0.96
VTA1Q9NP79 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC21.04■□□□□ 0.96
VTA1Q9NP79 PVRIG2P-201ENST00000435460 978 ntBASIC21.04■□□□□ 0.96
VTA1Q9NP79 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC21.04■□□□□ 0.96
VTA1Q9NP79 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC21.04■□□□□ 0.96
VTA1Q9NP79 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
VTA1Q9NP79 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC21.04■□□□□ 0.96
VTA1Q9NP79 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC21.04■□□□□ 0.96
VTA1Q9NP79 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
VTA1Q9NP79 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
VTA1Q9NP79 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC21.04■□□□□ 0.96
VTA1Q9NP79 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
VTA1Q9NP79 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC21.04■□□□□ 0.96
VTA1Q9NP79 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
VTA1Q9NP79 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC21.04■□□□□ 0.96
VTA1Q9NP79 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC21.04■□□□□ 0.96
VTA1Q9NP79 KRT18P1-202ENST00000452408 1331 ntBASIC21.04■□□□□ 0.96
VTA1Q9NP79 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
VTA1Q9NP79 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
VTA1Q9NP79 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC21.03■□□□□ 0.96
VTA1Q9NP79 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
VTA1Q9NP79 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
VTA1Q9NP79 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC21.03■□□□□ 0.96
VTA1Q9NP79 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
VTA1Q9NP79 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
VTA1Q9NP79 NUS1P1-201ENST00000446295 882 ntBASIC21.03■□□□□ 0.96
VTA1Q9NP79 AC111152.3-201ENST00000569699 673 ntBASIC21.03■□□□□ 0.96
VTA1Q9NP79 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC21.03■□□□□ 0.96
VTA1Q9NP79 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
VTA1Q9NP79 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC21.03■□□□□ 0.96
VTA1Q9NP79 AC141586.3-201ENST00000562166 1838 ntBASIC21.03■□□□□ 0.96
VTA1Q9NP79 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC21.03■□□□□ 0.96
VTA1Q9NP79 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
VTA1Q9NP79 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
VTA1Q9NP79 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
VTA1Q9NP79 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
VTA1Q9NP79 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC21.03■□□□□ 0.96
VTA1Q9NP79 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC21.03■□□□□ 0.96
VTA1Q9NP79 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC21.03■□□□□ 0.96
VTA1Q9NP79 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC21.03■□□□□ 0.96
VTA1Q9NP79 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC21.02■□□□□ 0.96
VTA1Q9NP79 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
VTA1Q9NP79 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
VTA1Q9NP79 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
VTA1Q9NP79 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
VTA1Q9NP79 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
VTA1Q9NP79 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC21.02■□□□□ 0.96
VTA1Q9NP79 DRAXINP1-201ENST00000437611 948 ntBASIC21.02■□□□□ 0.96
VTA1Q9NP79 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC21.02■□□□□ 0.96
VTA1Q9NP79 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC21.02■□□□□ 0.96
VTA1Q9NP79 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC21.02■□□□□ 0.96
VTA1Q9NP79 MPI-205ENST00000562606 1052 ntTSL 3 BASIC21.02■□□□□ 0.96
VTA1Q9NP79 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC21.02■□□□□ 0.96
VTA1Q9NP79 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC21.02■□□□□ 0.96
VTA1Q9NP79 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
VTA1Q9NP79 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
VTA1Q9NP79 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC21.02■□□□□ 0.96
VTA1Q9NP79 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
VTA1Q9NP79 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
VTA1Q9NP79 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
VTA1Q9NP79 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
VTA1Q9NP79 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
VTA1Q9NP79 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC21.02■□□□□ 0.96
VTA1Q9NP79 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC21.02■□□□□ 0.96
VTA1Q9NP79 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
VTA1Q9NP79 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC21.02■□□□□ 0.96
VTA1Q9NP79 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
VTA1Q9NP79 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
VTA1Q9NP79 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
VTA1Q9NP79 AC006333.2-201ENST00000607957 2099 ntBASIC21.01■□□□□ 0.95
VTA1Q9NP79 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC21.01■□□□□ 0.95
VTA1Q9NP79 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
VTA1Q9NP79 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
VTA1Q9NP79 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC21.01■□□□□ 0.95
VTA1Q9NP79 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC21.01■□□□□ 0.95
VTA1Q9NP79 SLC25A24-204ENST00000569674 2357 ntBASIC21.01■□□□□ 0.95
VTA1Q9NP79 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC21.01■□□□□ 0.95
VTA1Q9NP79 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
VTA1Q9NP79 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
VTA1Q9NP79 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC21.01■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms