Protein–RNA interactions for Protein: Q9H2S5

RNF39, RING finger protein 39, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39Q9H2S5 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
RNF39Q9H2S5 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
RNF39Q9H2S5 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RNF39Q9H2S5 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC20.85■□□□□ 0.93
RNF39Q9H2S5 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RNF39Q9H2S5 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RNF39Q9H2S5 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
RNF39Q9H2S5 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RNF39Q9H2S5 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
RNF39Q9H2S5 PLSCR2-201ENST00000336685 1272 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RNF39Q9H2S5 DYNLT1-203ENST00000367089 726 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RNF39Q9H2S5 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RNF39Q9H2S5 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RNF39Q9H2S5 LIN28AP1-201ENST00000429574 405 ntBASIC20.85■□□□□ 0.93
RNF39Q9H2S5 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RNF39Q9H2S5 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
RNF39Q9H2S5 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC20.85■□□□□ 0.93
RNF39Q9H2S5 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC20.85■□□□□ 0.93
RNF39Q9H2S5 LYVE1-203ENST00000529598 936 ntTSL 2 BASIC20.85■□□□□ 0.93
RNF39Q9H2S5 AP001266.1-201ENST00000531155 1044 ntTSL 2 BASIC20.85■□□□□ 0.93
RNF39Q9H2S5 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RNF39Q9H2S5 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
RNF39Q9H2S5 AC015818.2-201ENST00000563569 840 ntBASIC20.85■□□□□ 0.93
RNF39Q9H2S5 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC20.85■□□□□ 0.93
RNF39Q9H2S5 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC20.85■□□□□ 0.93
RNF39Q9H2S5 LGALS8-AS1-201ENST00000487567 1457 ntBASIC20.85■□□□□ 0.93
RNF39Q9H2S5 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RNF39Q9H2S5 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
RNF39Q9H2S5 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
RNF39Q9H2S5 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
RNF39Q9H2S5 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RNF39Q9H2S5 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
RNF39Q9H2S5 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
RNF39Q9H2S5 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC20.85■□□□□ 0.93
RNF39Q9H2S5 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RNF39Q9H2S5 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RNF39Q9H2S5 ZNF815P-204ENST00000434898 1737 ntBASIC20.84■□□□□ 0.93
RNF39Q9H2S5 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RNF39Q9H2S5 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
RNF39Q9H2S5 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
RNF39Q9H2S5 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC20.84■□□□□ 0.93
RNF39Q9H2S5 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RNF39Q9H2S5 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RNF39Q9H2S5 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RNF39Q9H2S5 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RNF39Q9H2S5 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC20.84■□□□□ 0.93
RNF39Q9H2S5 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC20.84■□□□□ 0.93
RNF39Q9H2S5 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC20.84■□□□□ 0.93
RNF39Q9H2S5 AL121972.2-201ENST00000431108 556 ntTSL 4 BASIC20.84■□□□□ 0.93
RNF39Q9H2S5 CCR12P-201ENST00000446203 998 ntBASIC20.84■□□□□ 0.93
RNF39Q9H2S5 ATP5G1P1-201ENST00000448724 379 ntBASIC20.84■□□□□ 0.93
RNF39Q9H2S5 IL12A-AS1-201ENST00000462431 988 ntTSL 5 BASIC20.84■□□□□ 0.93
RNF39Q9H2S5 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC20.84■□□□□ 0.93
RNF39Q9H2S5 DUX4L26-201ENST00000489078 1255 ntBASIC20.84■□□□□ 0.93
RNF39Q9H2S5 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
RNF39Q9H2S5 AL117351.2-201ENST00000513571 157 ntBASIC20.84■□□□□ 0.93
RNF39Q9H2S5 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC20.84■□□□□ 0.93
RNF39Q9H2S5 KCTD14-202ENST00000533144 904 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
RNF39Q9H2S5 AP002807.1-203ENST00000534517 664 ntTSL 2 BASIC20.84■□□□□ 0.93
RNF39Q9H2S5 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RNF39Q9H2S5 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RNF39Q9H2S5 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC20.84■□□□□ 0.93
RNF39Q9H2S5 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC20.84■□□□□ 0.93
RNF39Q9H2S5 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
RNF39Q9H2S5 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
RNF39Q9H2S5 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC20.84■□□□□ 0.93
RNF39Q9H2S5 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RNF39Q9H2S5 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RNF39Q9H2S5 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC20.83■□□□□ 0.93
RNF39Q9H2S5 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC20.83■□□□□ 0.93
RNF39Q9H2S5 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC20.83■□□□□ 0.93
RNF39Q9H2S5 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RNF39Q9H2S5 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RNF39Q9H2S5 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC20.83■□□□□ 0.93
RNF39Q9H2S5 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
RNF39Q9H2S5 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
RNF39Q9H2S5 AL355143.1-201ENST00000407101 841 ntBASIC20.83■□□□□ 0.93
RNF39Q9H2S5 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC20.83■□□□□ 0.93
RNF39Q9H2S5 BUD23-204ENST00000423497 1219 ntTSL 5 BASIC20.83■□□□□ 0.93
RNF39Q9H2S5 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RNF39Q9H2S5 USP9YP2-201ENST00000504503 1000 ntBASIC20.83■□□□□ 0.93
RNF39Q9H2S5 AC020699.1-201ENST00000505161 445 ntBASIC20.83■□□□□ 0.93
RNF39Q9H2S5 TMEM92-AS1-201ENST00000508851 750 ntTSL 3 BASIC20.83■□□□□ 0.93
RNF39Q9H2S5 USP9YP1-201ENST00000513521 1002 ntBASIC20.83■□□□□ 0.93
RNF39Q9H2S5 AC131902.1-201ENST00000521558 594 ntTSL 3 BASIC20.83■□□□□ 0.93
RNF39Q9H2S5 AC092574.1-201ENST00000609771 420 ntBASIC20.83■□□□□ 0.93
RNF39Q9H2S5 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
RNF39Q9H2S5 GXYLT1P4-201ENST00000613576 1192 ntBASIC20.83■□□□□ 0.93
RNF39Q9H2S5 TTN-AS1-268ENST00000629094 604 ntTSL 5 BASIC20.83■□□□□ 0.93
RNF39Q9H2S5 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RNF39Q9H2S5 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC20.83■□□□□ 0.92
RNF39Q9H2S5 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
RNF39Q9H2S5 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
RNF39Q9H2S5 SDHAP1-207ENST00000440850 2000 ntBASIC20.83■□□□□ 0.92
RNF39Q9H2S5 PRIM1-201ENST00000338193 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
RNF39Q9H2S5 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
RNF39Q9H2S5 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
RNF39Q9H2S5 PWWP2AP1-201ENST00000429776 2273 ntBASIC20.83■□□□□ 0.92
RNF39Q9H2S5 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
RNF39Q9H2S5 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms