Protein–RNA interactions for Protein: Q96NY8

NECTIN4, Nectin-4, humanhuman

Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN4Q96NY8 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NECTIN4Q96NY8 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
NECTIN4Q96NY8 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC19.47■□□□□ 0.71
NECTIN4Q96NY8 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
NECTIN4Q96NY8 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NECTIN4Q96NY8 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC19.47■□□□□ 0.71
NECTIN4Q96NY8 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
NECTIN4Q96NY8 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
NECTIN4Q96NY8 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC19.47■□□□□ 0.71
NECTIN4Q96NY8 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NECTIN4Q96NY8 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NECTIN4Q96NY8 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NECTIN4Q96NY8 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NECTIN4Q96NY8 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC19.47■□□□□ 0.71
NECTIN4Q96NY8 IGHV3-47-201ENST00000425060 335 ntBASIC19.47■□□□□ 0.71
NECTIN4Q96NY8 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC19.47■□□□□ 0.71
NECTIN4Q96NY8 PPIE-208ENST00000470213 927 ntTSL 3 BASIC19.47■□□□□ 0.71
NECTIN4Q96NY8 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC19.47■□□□□ 0.71
NECTIN4Q96NY8 GUSBP12-201ENST00000513727 720 ntBASIC19.47■□□□□ 0.71
NECTIN4Q96NY8 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC19.47■□□□□ 0.71
NECTIN4Q96NY8 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC19.47■□□□□ 0.71
NECTIN4Q96NY8 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
NECTIN4Q96NY8 MIR3180-4-201ENST00000582223 153 ntBASIC19.47■□□□□ 0.71
NECTIN4Q96NY8 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC19.47■□□□□ 0.71
NECTIN4Q96NY8 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NECTIN4Q96NY8 AC092667.1-201ENST00000434301 2586 ntBASIC19.47■□□□□ 0.71
NECTIN4Q96NY8 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
NECTIN4Q96NY8 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
NECTIN4Q96NY8 AL512408.1-201ENST00000569378 2000 ntBASIC19.47■□□□□ 0.71
NECTIN4Q96NY8 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
NECTIN4Q96NY8 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NECTIN4Q96NY8 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NECTIN4Q96NY8 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NECTIN4Q96NY8 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
NECTIN4Q96NY8 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
NECTIN4Q96NY8 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
NECTIN4Q96NY8 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NECTIN4Q96NY8 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
NECTIN4Q96NY8 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
NECTIN4Q96NY8 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC19.46■□□□□ 0.71
NECTIN4Q96NY8 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC19.46■□□□□ 0.71
NECTIN4Q96NY8 ABR-204ENST00000543210 1049 ntTSL 2 BASIC19.46■□□□□ 0.71
NECTIN4Q96NY8 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC19.46■□□□□ 0.71
NECTIN4Q96NY8 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC19.46■□□□□ 0.71
NECTIN4Q96NY8 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC19.46■□□□□ 0.71
NECTIN4Q96NY8 REXO1L6P-202ENST00000619970 1078 ntBASIC19.46■□□□□ 0.71
NECTIN4Q96NY8 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC19.46■□□□□ 0.71
NECTIN4Q96NY8 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC19.46■□□□□ 0.71
NECTIN4Q96NY8 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NECTIN4Q96NY8 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NECTIN4Q96NY8 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC19.46■□□□□ 0.71
NECTIN4Q96NY8 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC19.46■□□□□ 0.71
NECTIN4Q96NY8 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
NECTIN4Q96NY8 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
NECTIN4Q96NY8 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC19.46■□□□□ 0.71
NECTIN4Q96NY8 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
NECTIN4Q96NY8 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC19.45■□□□□ 0.7
NECTIN4Q96NY8 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NECTIN4Q96NY8 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC19.45■□□□□ 0.7
NECTIN4Q96NY8 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NECTIN4Q96NY8 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
NECTIN4Q96NY8 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
NECTIN4Q96NY8 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
NECTIN4Q96NY8 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
NECTIN4Q96NY8 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC19.45■□□□□ 0.7
NECTIN4Q96NY8 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
NECTIN4Q96NY8 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC19.45■□□□□ 0.7
NECTIN4Q96NY8 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
NECTIN4Q96NY8 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
NECTIN4Q96NY8 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NECTIN4Q96NY8 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NECTIN4Q96NY8 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
NECTIN4Q96NY8 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC19.45■□□□□ 0.7
NECTIN4Q96NY8 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC19.45■□□□□ 0.7
NECTIN4Q96NY8 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC19.45■□□□□ 0.7
NECTIN4Q96NY8 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
NECTIN4Q96NY8 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC19.45■□□□□ 0.7
NECTIN4Q96NY8 AL671883.3-201ENST00000603274 991 ntBASIC19.45■□□□□ 0.7
NECTIN4Q96NY8 AC139530.3-201ENST00000620344 690 ntBASIC19.45■□□□□ 0.7
NECTIN4Q96NY8 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
NECTIN4Q96NY8 AL391422.3-201ENST00000603791 2761 ntBASIC19.45■□□□□ 0.7
NECTIN4Q96NY8 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
NECTIN4Q96NY8 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NECTIN4Q96NY8 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC19.44■□□□□ 0.7
NECTIN4Q96NY8 AL162377.1-201ENST00000618844 1793 ntBASIC19.44■□□□□ 0.7
NECTIN4Q96NY8 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
NECTIN4Q96NY8 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NECTIN4Q96NY8 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
NECTIN4Q96NY8 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
NECTIN4Q96NY8 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NECTIN4Q96NY8 AKR1C7P-201ENST00000305623 895 ntBASIC19.44■□□□□ 0.7
NECTIN4Q96NY8 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NECTIN4Q96NY8 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
NECTIN4Q96NY8 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
NECTIN4Q96NY8 KRT18P13-201ENST00000400056 1290 ntBASIC19.44■□□□□ 0.7
NECTIN4Q96NY8 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC19.44■□□□□ 0.7
NECTIN4Q96NY8 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC19.44■□□□□ 0.7
NECTIN4Q96NY8 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
NECTIN4Q96NY8 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NECTIN4Q96NY8 AL592071.1-201ENST00000611956 408 ntBASIC19.44■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms