Protein–RNA interactions for Protein: Q96NT5

SLC46A1, Proton-coupled folate transporter, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC46A1Q96NT5 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SLC46A1Q96NT5 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SLC46A1Q96NT5 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SLC46A1Q96NT5 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SLC46A1Q96NT5 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
SLC46A1Q96NT5 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC17.99■□□□□ 0.47
SLC46A1Q96NT5 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC17.99■□□□□ 0.47
SLC46A1Q96NT5 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
SLC46A1Q96NT5 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
SLC46A1Q96NT5 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
SLC46A1Q96NT5 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SLC46A1Q96NT5 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC17.99■□□□□ 0.47
SLC46A1Q96NT5 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SLC46A1Q96NT5 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
SLC46A1Q96NT5 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SLC46A1Q96NT5 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
SLC46A1Q96NT5 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
SLC46A1Q96NT5 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SLC46A1Q96NT5 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC17.99■□□□□ 0.47
SLC46A1Q96NT5 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC17.99■□□□□ 0.47
SLC46A1Q96NT5 KRT17P6-201ENST00000453795 1220 ntBASIC17.99■□□□□ 0.47
SLC46A1Q96NT5 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC17.99■□□□□ 0.47
SLC46A1Q96NT5 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC17.99■□□□□ 0.47
SLC46A1Q96NT5 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
SLC46A1Q96NT5 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
SLC46A1Q96NT5 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
SLC46A1Q96NT5 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SLC46A1Q96NT5 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
SLC46A1Q96NT5 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
SLC46A1Q96NT5 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SLC46A1Q96NT5 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
SLC46A1Q96NT5 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SLC46A1Q96NT5 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
SLC46A1Q96NT5 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SLC46A1Q96NT5 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC17.98■□□□□ 0.47
SLC46A1Q96NT5 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SLC46A1Q96NT5 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SLC46A1Q96NT5 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
SLC46A1Q96NT5 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SLC46A1Q96NT5 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC17.98■□□□□ 0.47
SLC46A1Q96NT5 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
SLC46A1Q96NT5 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC17.98■□□□□ 0.47
SLC46A1Q96NT5 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC17.98■□□□□ 0.47
SLC46A1Q96NT5 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC17.98■□□□□ 0.47
SLC46A1Q96NT5 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SLC46A1Q96NT5 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC17.98■□□□□ 0.47
SLC46A1Q96NT5 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC17.98■□□□□ 0.47
SLC46A1Q96NT5 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
SLC46A1Q96NT5 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC17.98■□□□□ 0.47
SLC46A1Q96NT5 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC17.98■□□□□ 0.47
SLC46A1Q96NT5 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SLC46A1Q96NT5 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC17.98■□□□□ 0.47
SLC46A1Q96NT5 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC17.98■□□□□ 0.47
SLC46A1Q96NT5 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC17.98■□□□□ 0.47
SLC46A1Q96NT5 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
SLC46A1Q96NT5 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC17.98■□□□□ 0.47
SLC46A1Q96NT5 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SLC46A1Q96NT5 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
SLC46A1Q96NT5 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SLC46A1Q96NT5 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SLC46A1Q96NT5 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SLC46A1Q96NT5 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SLC46A1Q96NT5 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SLC46A1Q96NT5 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SLC46A1Q96NT5 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC17.97■□□□□ 0.47
SLC46A1Q96NT5 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC17.97■□□□□ 0.47
SLC46A1Q96NT5 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SLC46A1Q96NT5 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SLC46A1Q96NT5 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SLC46A1Q96NT5 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC17.97■□□□□ 0.47
SLC46A1Q96NT5 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SLC46A1Q96NT5 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SLC46A1Q96NT5 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SLC46A1Q96NT5 AP002383.4-201ENST00000442518 975 ntBASIC17.97■□□□□ 0.47
SLC46A1Q96NT5 NUS1P1-201ENST00000446295 882 ntBASIC17.97■□□□□ 0.47
SLC46A1Q96NT5 UNC93B7-201ENST00000509439 705 ntBASIC17.97■□□□□ 0.47
SLC46A1Q96NT5 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC17.97■□□□□ 0.47
SLC46A1Q96NT5 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC17.97■□□□□ 0.47
SLC46A1Q96NT5 AC024243.1-201ENST00000609234 778 ntBASIC17.97■□□□□ 0.47
SLC46A1Q96NT5 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC17.97■□□□□ 0.47
SLC46A1Q96NT5 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
SLC46A1Q96NT5 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SLC46A1Q96NT5 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SLC46A1Q96NT5 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
SLC46A1Q96NT5 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SLC46A1Q96NT5 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
SLC46A1Q96NT5 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SLC46A1Q96NT5 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC17.97■□□□□ 0.47
SLC46A1Q96NT5 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC17.97■□□□□ 0.47
SLC46A1Q96NT5 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SLC46A1Q96NT5 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
SLC46A1Q96NT5 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
SLC46A1Q96NT5 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
SLC46A1Q96NT5 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC17.97■□□□□ 0.47
SLC46A1Q96NT5 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC17.97■□□□□ 0.47
SLC46A1Q96NT5 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SLC46A1Q96NT5 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SLC46A1Q96NT5 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SLC46A1Q96NT5 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC17.96■□□□□ 0.47
SLC46A1Q96NT5 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 66.3 ms