Protein–RNA interactions for Protein: P78527

PRKDC, DNA-dependent protein kinase catalytic subunit, humanhuman

Known RBP Predictions only

Length 4,128 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDCP78527 METTL26-205ENST00000397666 726 ntTSL 2 BASIC13.6□□□□□ -0.23
PRKDCP78527 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC13.6□□□□□ -0.23
PRKDCP78527 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
PRKDCP78527 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC13.6□□□□□ -0.23
PRKDCP78527 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC13.6□□□□□ -0.23
PRKDCP78527 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
PRKDCP78527 KIRREL3-AS3-201ENST00000404882 831 ntBASIC13.6□□□□□ -0.23
PRKDCP78527 AC009947.1-201ENST00000444350 727 ntBASIC13.6□□□□□ -0.23
PRKDCP78527 PAWRP1-201ENST00000451083 565 ntBASIC13.6□□□□□ -0.23
PRKDCP78527 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC13.6□□□□□ -0.23
PRKDCP78527 AC027612.4-201ENST00000605371 583 ntBASIC13.6□□□□□ -0.23
PRKDCP78527 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC13.6□□□□□ -0.23
PRKDCP78527 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
PRKDCP78527 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
PRKDCP78527 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
PRKDCP78527 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
PRKDCP78527 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
PRKDCP78527 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
PRKDCP78527 AL139400.1-201ENST00000366220 510 ntBASIC13.6□□□□□ -0.23
PRKDCP78527 CRCP-205ENST00000431089 942 ntTSL 2 BASIC13.6□□□□□ -0.23
PRKDCP78527 AC007967.2-201ENST00000432613 625 ntBASIC13.6□□□□□ -0.23
PRKDCP78527 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC13.6□□□□□ -0.23
PRKDCP78527 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
PRKDCP78527 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
PRKDCP78527 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC13.6□□□□□ -0.23
PRKDCP78527 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC13.6□□□□□ -0.23
PRKDCP78527 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
PRKDCP78527 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
PRKDCP78527 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
PRKDCP78527 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC13.59□□□□□ -0.23
PRKDCP78527 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC13.59□□□□□ -0.23
PRKDCP78527 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC13.59□□□□□ -0.23
PRKDCP78527 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
PRKDCP78527 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
PRKDCP78527 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
PRKDCP78527 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
PRKDCP78527 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
PRKDCP78527 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC13.59□□□□□ -0.23
PRKDCP78527 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC13.59□□□□□ -0.23
PRKDCP78527 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC13.59□□□□□ -0.23
PRKDCP78527 INO80C-206ENST00000586489 594 ntTSL 3 BASIC13.59□□□□□ -0.23
PRKDCP78527 GPR32P1-201ENST00000601788 811 ntBASIC13.59□□□□□ -0.23
PRKDCP78527 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
PRKDCP78527 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
PRKDCP78527 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
PRKDCP78527 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
PRKDCP78527 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
PRKDCP78527 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
PRKDCP78527 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC13.59□□□□□ -0.23
PRKDCP78527 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
PRKDCP78527 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
PRKDCP78527 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
PRKDCP78527 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC13.59□□□□□ -0.23
PRKDCP78527 AC093028.1-201ENST00000622998 982 ntBASIC13.59□□□□□ -0.23
PRKDCP78527 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
PRKDCP78527 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
PRKDCP78527 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
PRKDCP78527 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
PRKDCP78527 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC13.58□□□□□ -0.23
PRKDCP78527 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
PRKDCP78527 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC13.58□□□□□ -0.23
PRKDCP78527 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
PRKDCP78527 BID-203ENST00000399765 1879 ntTSL 2 BASIC13.58□□□□□ -0.24
PRKDCP78527 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
PRKDCP78527 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
PRKDCP78527 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC13.58□□□□□ -0.24
PRKDCP78527 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC13.58□□□□□ -0.24
PRKDCP78527 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC13.58□□□□□ -0.24
PRKDCP78527 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
PRKDCP78527 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC13.58□□□□□ -0.24
PRKDCP78527 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
PRKDCP78527 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
PRKDCP78527 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
PRKDCP78527 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
PRKDCP78527 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
PRKDCP78527 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
PRKDCP78527 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC13.58□□□□□ -0.24
PRKDCP78527 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC13.58□□□□□ -0.24
PRKDCP78527 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
PRKDCP78527 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
PRKDCP78527 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC13.57□□□□□ -0.24
PRKDCP78527 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
PRKDCP78527 RPS2P28-201ENST00000314255 741 ntBASIC13.57□□□□□ -0.24
PRKDCP78527 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
PRKDCP78527 RBM17P3-201ENST00000417687 1192 ntBASIC13.57□□□□□ -0.24
PRKDCP78527 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
PRKDCP78527 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
PRKDCP78527 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC13.57□□□□□ -0.24
PRKDCP78527 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC13.57□□□□□ -0.24
PRKDCP78527 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
PRKDCP78527 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
PRKDCP78527 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
PRKDCP78527 AP005117.1-201ENST00000584346 1413 ntBASIC13.57□□□□□ -0.24
PRKDCP78527 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
PRKDCP78527 MED16-201ENST00000269814 1199 ntTSL 5 BASIC13.57□□□□□ -0.24
PRKDCP78527 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
PRKDCP78527 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
PRKDCP78527 AC005034.1-201ENST00000426657 489 ntBASIC13.57□□□□□ -0.24
PRKDCP78527 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC13.57□□□□□ -0.24
PRKDCP78527 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC13.57□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms