Protein–RNA interactions for Protein: P78395

PRAME, Melanoma antigen preferentially expressed in tumors, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEP78395 NEFHP1-201ENST00000412845 2629 ntBASIC18.99■□□□□ 0.63
PRAMEP78395 HTR7P1-202ENST00000624664 4411 ntBASIC18.99■□□□□ 0.63
PRAMEP78395 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC18.99■□□□□ 0.63
PRAMEP78395 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PRAMEP78395 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC18.99■□□□□ 0.63
PRAMEP78395 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC18.99■□□□□ 0.63
PRAMEP78395 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PRAMEP78395 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
PRAMEP78395 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PRAMEP78395 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC18.99■□□□□ 0.63
PRAMEP78395 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PRAMEP78395 FAM197Y1-201ENST00000421178 764 ntBASIC18.99■□□□□ 0.63
PRAMEP78395 SAPCD2P4-201ENST00000424595 1171 ntBASIC18.99■□□□□ 0.63
PRAMEP78395 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC18.99■□□□□ 0.63
PRAMEP78395 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
PRAMEP78395 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC18.99■□□□□ 0.63
PRAMEP78395 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PRAMEP78395 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
PRAMEP78395 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PRAMEP78395 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
PRAMEP78395 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC18.99■□□□□ 0.63
PRAMEP78395 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
PRAMEP78395 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PRAMEP78395 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC18.99■□□□□ 0.63
PRAMEP78395 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PRAMEP78395 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
PRAMEP78395 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PRAMEP78395 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC18.98■□□□□ 0.63
PRAMEP78395 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PRAMEP78395 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PRAMEP78395 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
PRAMEP78395 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
PRAMEP78395 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PRAMEP78395 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PRAMEP78395 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC18.98■□□□□ 0.63
PRAMEP78395 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC18.98■□□□□ 0.63
PRAMEP78395 CD177P1-201ENST00000606252 935 ntBASIC18.98■□□□□ 0.63
PRAMEP78395 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PRAMEP78395 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PRAMEP78395 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PRAMEP78395 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
PRAMEP78395 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
PRAMEP78395 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PRAMEP78395 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC18.98■□□□□ 0.63
PRAMEP78395 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PRAMEP78395 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC18.98■□□□□ 0.63
PRAMEP78395 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
PRAMEP78395 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC18.97■□□□□ 0.63
PRAMEP78395 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
PRAMEP78395 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PRAMEP78395 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC18.97■□□□□ 0.63
PRAMEP78395 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC18.97■□□□□ 0.63
PRAMEP78395 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PRAMEP78395 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PRAMEP78395 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC18.97■□□□□ 0.63
PRAMEP78395 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
PRAMEP78395 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC18.97■□□□□ 0.63
PRAMEP78395 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PRAMEP78395 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
PRAMEP78395 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PRAMEP78395 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC18.97■□□□□ 0.63
PRAMEP78395 AP001412.1-201ENST00000608405 714 ntBASIC18.97■□□□□ 0.63
PRAMEP78395 MIR6786-201ENST00000616843 113 ntBASIC18.97■□□□□ 0.63
PRAMEP78395 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC18.97■□□□□ 0.63
PRAMEP78395 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC18.97■□□□□ 0.63
PRAMEP78395 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PRAMEP78395 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
PRAMEP78395 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PRAMEP78395 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
PRAMEP78395 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC18.97■□□□□ 0.63
PRAMEP78395 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
PRAMEP78395 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC18.96■□□□□ 0.63
PRAMEP78395 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PRAMEP78395 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PRAMEP78395 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC18.96■□□□□ 0.63
PRAMEP78395 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC18.96■□□□□ 0.63
PRAMEP78395 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC18.96■□□□□ 0.63
PRAMEP78395 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
PRAMEP78395 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PRAMEP78395 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PRAMEP78395 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
PRAMEP78395 FAM207BP-201ENST00000447172 505 ntBASIC18.96■□□□□ 0.63
PRAMEP78395 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC18.96■□□□□ 0.63
PRAMEP78395 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC18.96■□□□□ 0.63
PRAMEP78395 AC083906.6-201ENST00000641366 219 ntBASIC18.96■□□□□ 0.63
PRAMEP78395 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
PRAMEP78395 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PRAMEP78395 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
PRAMEP78395 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
PRAMEP78395 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PRAMEP78395 SRI-203ENST00000419179 1307 ntTSL 2 BASIC18.96■□□□□ 0.63
PRAMEP78395 FSCN1P1-201ENST00000568912 1481 ntBASIC18.96■□□□□ 0.63
PRAMEP78395 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC18.96■□□□□ 0.63
PRAMEP78395 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PRAMEP78395 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC18.96■□□□□ 0.63
PRAMEP78395 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
PRAMEP78395 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
PRAMEP78395 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC18.95■□□□□ 0.62
PRAMEP78395 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
PRAMEP78395 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC18.95■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms