Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC17.4■□□□□ 0.38
PER3P56645 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC17.4■□□□□ 0.38
PER3P56645 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC17.4■□□□□ 0.38
PER3P56645 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC17.4■□□□□ 0.38
PER3P56645 AC130371.2-201ENST00000619443 611 ntBASIC17.4■□□□□ 0.38
PER3P56645 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
PER3P56645 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PER3P56645 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC17.4■□□□□ 0.38
PER3P56645 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
PER3P56645 BCL2-203ENST00000589955 5011 ntBASIC17.4■□□□□ 0.38
PER3P56645 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
PER3P56645 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PER3P56645 AC020916.1-201ENST00000587762 1774 ntBASIC17.4■□□□□ 0.38
PER3P56645 AL162377.1-201ENST00000618844 1793 ntBASIC17.4■□□□□ 0.38
PER3P56645 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
PER3P56645 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
PER3P56645 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
PER3P56645 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.38
PER3P56645 AC007613.1-201ENST00000572811 2597 ntBASIC17.39■□□□□ 0.38
PER3P56645 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
PER3P56645 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
PER3P56645 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
PER3P56645 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC17.39■□□□□ 0.38
PER3P56645 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC17.39■□□□□ 0.37
PER3P56645 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PER3P56645 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
PER3P56645 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PER3P56645 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PER3P56645 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
PER3P56645 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PER3P56645 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PER3P56645 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC17.39■□□□□ 0.37
PER3P56645 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
PER3P56645 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PER3P56645 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
PER3P56645 AL450487.1-201ENST00000426799 995 ntBASIC17.39■□□□□ 0.37
PER3P56645 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PER3P56645 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC17.39■□□□□ 0.37
PER3P56645 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
PER3P56645 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC17.39■□□□□ 0.37
PER3P56645 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC17.39■□□□□ 0.37
PER3P56645 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC17.39■□□□□ 0.37
PER3P56645 AC093458.2-201ENST00000623150 629 ntBASIC17.39■□□□□ 0.37
PER3P56645 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PER3P56645 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PER3P56645 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC17.39■□□□□ 0.37
PER3P56645 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PER3P56645 AP001271.2-201ENST00000624018 1556 ntBASIC17.39■□□□□ 0.37
PER3P56645 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
PER3P56645 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC17.39■□□□□ 0.37
PER3P56645 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PER3P56645 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PER3P56645 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC17.39■□□□□ 0.37
PER3P56645 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
PER3P56645 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PER3P56645 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PER3P56645 DET1-207ENST00000564406 2315 ntTSL 2 BASIC17.38■□□□□ 0.37
PER3P56645 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PER3P56645 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
PER3P56645 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
PER3P56645 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
PER3P56645 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
PER3P56645 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PER3P56645 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PER3P56645 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PER3P56645 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
PER3P56645 RCC2P6-201ENST00000526625 1557 ntBASIC17.38■□□□□ 0.37
PER3P56645 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
PER3P56645 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PER3P56645 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PER3P56645 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
PER3P56645 COPS8-203ENST00000409334 794 ntTSL 5 BASIC17.38■□□□□ 0.37
PER3P56645 TSPY17P-201ENST00000450329 467 ntBASIC17.38■□□□□ 0.37
PER3P56645 FDX2-206ENST00000492239 773 ntTSL 2 BASIC17.38■□□□□ 0.37
PER3P56645 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PER3P56645 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC17.38■□□□□ 0.37
PER3P56645 AC140113.3-201ENST00000605663 199 ntBASIC17.38■□□□□ 0.37
PER3P56645 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC17.38■□□□□ 0.37
PER3P56645 AC141257.4-201ENST00000634557 245 ntBASIC17.38■□□□□ 0.37
PER3P56645 AC136944.6-201ENST00000634818 245 ntBASIC17.38■□□□□ 0.37
PER3P56645 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PER3P56645 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PER3P56645 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PER3P56645 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
PER3P56645 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
PER3P56645 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
PER3P56645 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
PER3P56645 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
PER3P56645 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PER3P56645 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC17.38■□□□□ 0.37
PER3P56645 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PER3P56645 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PER3P56645 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
PER3P56645 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
PER3P56645 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PER3P56645 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PER3P56645 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PER3P56645 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC17.37■□□□□ 0.37
PER3P56645 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PER3P56645 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms