Protein–RNA interactions for Protein: P56589

PEX3, Peroxisomal biogenesis factor 3, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX3P56589 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
PEX3P56589 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PEX3P56589 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC20.73■□□□□ 0.91
PEX3P56589 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PEX3P56589 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PEX3P56589 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC20.73■□□□□ 0.91
PEX3P56589 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC20.72■□□□□ 0.91
PEX3P56589 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PEX3P56589 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC20.72■□□□□ 0.91
PEX3P56589 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PEX3P56589 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PEX3P56589 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PEX3P56589 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
PEX3P56589 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PEX3P56589 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC20.72■□□□□ 0.91
PEX3P56589 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC20.72■□□□□ 0.91
PEX3P56589 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC20.72■□□□□ 0.91
PEX3P56589 TK2-213ENST00000563369 882 ntTSL 5 BASIC20.72■□□□□ 0.91
PEX3P56589 RN7SL850P-201ENST00000579959 291 ntBASIC20.72■□□□□ 0.91
PEX3P56589 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PEX3P56589 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PEX3P56589 AL109659.2-201ENST00000606809 1674 ntBASIC20.72■□□□□ 0.91
PEX3P56589 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PEX3P56589 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
PEX3P56589 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PEX3P56589 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
PEX3P56589 AC036111.1-201ENST00000533973 1582 ntBASIC20.72■□□□□ 0.91
PEX3P56589 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC20.71■□□□□ 0.91
PEX3P56589 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC20.71■□□□□ 0.91
PEX3P56589 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PEX3P56589 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
PEX3P56589 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC20.71■□□□□ 0.91
PEX3P56589 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PEX3P56589 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC20.71■□□□□ 0.91
PEX3P56589 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PEX3P56589 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PEX3P56589 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PEX3P56589 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC20.71■□□□□ 0.91
PEX3P56589 CFL2-205ENST00000555765 632 ntTSL 2 BASIC20.71■□□□□ 0.91
PEX3P56589 AL512604.3-201ENST00000569583 964 ntBASIC20.71■□□□□ 0.91
PEX3P56589 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PEX3P56589 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC20.71■□□□□ 0.91
PEX3P56589 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC20.71■□□□□ 0.91
PEX3P56589 AC092865.7-201ENST00000641832 219 ntBASIC20.71■□□□□ 0.91
PEX3P56589 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
PEX3P56589 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
PEX3P56589 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PEX3P56589 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC20.71■□□□□ 0.91
PEX3P56589 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PEX3P56589 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
PEX3P56589 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC20.7■□□□□ 0.91
PEX3P56589 HEIH-201ENST00000623091 1652 ntBASIC20.7■□□□□ 0.91
PEX3P56589 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC20.7■□□□□ 0.9
PEX3P56589 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
PEX3P56589 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PEX3P56589 LGALS8-AS1-201ENST00000487567 1457 ntBASIC20.7■□□□□ 0.9
PEX3P56589 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PEX3P56589 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PEX3P56589 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PEX3P56589 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC20.7■□□□□ 0.9
PEX3P56589 FAM210CP-201ENST00000445714 574 ntBASIC20.7■□□□□ 0.9
PEX3P56589 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC20.7■□□□□ 0.9
PEX3P56589 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PEX3P56589 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC20.7■□□□□ 0.9
PEX3P56589 MIR3180-5-201ENST00000583743 153 ntBASIC20.7■□□□□ 0.9
PEX3P56589 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC20.7■□□□□ 0.9
PEX3P56589 AC083906.6-201ENST00000641366 219 ntBASIC20.7■□□□□ 0.9
PEX3P56589 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC20.7■□□□□ 0.9
PEX3P56589 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PEX3P56589 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC20.7■□□□□ 0.9
PEX3P56589 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PEX3P56589 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PEX3P56589 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
PEX3P56589 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PEX3P56589 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC20.7■□□□□ 0.9
PEX3P56589 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
PEX3P56589 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC20.7■□□□□ 0.9
PEX3P56589 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC20.7■□□□□ 0.9
PEX3P56589 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
PEX3P56589 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC20.69■□□□□ 0.9
PEX3P56589 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
PEX3P56589 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PEX3P56589 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PEX3P56589 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC20.69■□□□□ 0.9
PEX3P56589 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
PEX3P56589 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC20.69■□□□□ 0.9
PEX3P56589 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC20.69■□□□□ 0.9
PEX3P56589 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PEX3P56589 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PEX3P56589 ENSA-205ENST00000361532 792 ntTSL 2 BASIC20.69■□□□□ 0.9
PEX3P56589 ILF2-202ENST00000368681 726 ntTSL 2 BASIC20.69■□□□□ 0.9
PEX3P56589 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
PEX3P56589 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
PEX3P56589 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PEX3P56589 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PEX3P56589 CD70-202ENST00000423145 881 ntTSL 2 BASIC20.69■□□□□ 0.9
PEX3P56589 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
PEX3P56589 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC20.69■□□□□ 0.9
PEX3P56589 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
PEX3P56589 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC20.69■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms