Protein–RNA interactions for Protein: P54259

ATN1, Atrophin-1, humanhuman

Predicted RBP Predictions only

Length 1,190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATN1P54259 NSUN5P1-202ENST00000421140 1535 ntBASIC20.73■□□□□ 0.91
ATN1P54259 NSUN5P2-203ENST00000457352 1529 ntBASIC20.73■□□□□ 0.91
ATN1P54259 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
ATN1P54259 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC20.73■□□□□ 0.91
ATN1P54259 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC20.73■□□□□ 0.91
ATN1P54259 KRT8P3-201ENST00000519669 1449 ntBASIC20.73■□□□□ 0.91
ATN1P54259 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
ATN1P54259 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC20.73■□□□□ 0.91
ATN1P54259 FAM197Y8-203ENST00000450145 560 ntBASIC20.73■□□□□ 0.91
ATN1P54259 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ATN1P54259 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC20.73■□□□□ 0.91
ATN1P54259 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ATN1P54259 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC20.73■□□□□ 0.91
ATN1P54259 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
ATN1P54259 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC20.73■□□□□ 0.91
ATN1P54259 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ATN1P54259 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC20.73■□□□□ 0.91
ATN1P54259 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ATN1P54259 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC20.73■□□□□ 0.91
ATN1P54259 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ATN1P54259 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
ATN1P54259 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
ATN1P54259 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
ATN1P54259 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
ATN1P54259 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
ATN1P54259 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ATN1P54259 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ATN1P54259 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
ATN1P54259 MIR940-201ENST00000401276 94 ntBASIC20.72■□□□□ 0.91
ATN1P54259 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
ATN1P54259 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
ATN1P54259 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC20.72■□□□□ 0.91
ATN1P54259 KRT18P58-201ENST00000527480 1120 ntBASIC20.72■□□□□ 0.91
ATN1P54259 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC20.72■□□□□ 0.91
ATN1P54259 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC20.72■□□□□ 0.91
ATN1P54259 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC20.72■□□□□ 0.91
ATN1P54259 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ATN1P54259 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC20.72■□□□□ 0.91
ATN1P54259 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
ATN1P54259 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ATN1P54259 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC20.72■□□□□ 0.91
ATN1P54259 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
ATN1P54259 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC20.72■□□□□ 0.91
ATN1P54259 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC20.71■□□□□ 0.91
ATN1P54259 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
ATN1P54259 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ATN1P54259 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ATN1P54259 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC20.71■□□□□ 0.91
ATN1P54259 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
ATN1P54259 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ATN1P54259 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ATN1P54259 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC20.71■□□□□ 0.91
ATN1P54259 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC20.71■□□□□ 0.91
ATN1P54259 AC104390.1-201ENST00000555663 520 ntBASIC20.71■□□□□ 0.91
ATN1P54259 GPR32P1-201ENST00000601788 811 ntBASIC20.71■□□□□ 0.91
ATN1P54259 CCNC-219ENST00000627680 896 ntTSL 5 BASIC20.71■□□□□ 0.91
ATN1P54259 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
ATN1P54259 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC20.71■□□□□ 0.91
ATN1P54259 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
ATN1P54259 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ATN1P54259 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ATN1P54259 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC20.71■□□□□ 0.91
ATN1P54259 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC20.71■□□□□ 0.91
ATN1P54259 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.91
ATN1P54259 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
ATN1P54259 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
ATN1P54259 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
ATN1P54259 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
ATN1P54259 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ATN1P54259 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
ATN1P54259 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
ATN1P54259 AL031284.1-201ENST00000419297 478 ntBASIC20.7■□□□□ 0.9
ATN1P54259 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC20.7■□□□□ 0.9
ATN1P54259 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC20.7■□□□□ 0.9
ATN1P54259 AC091607.1-201ENST00000490318 1060 ntBASIC20.7■□□□□ 0.9
ATN1P54259 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
ATN1P54259 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC20.7■□□□□ 0.9
ATN1P54259 AP005901.3-202ENST00000581653 237 ntBASIC20.7■□□□□ 0.9
ATN1P54259 AC148477.8-201ENST00000624298 468 ntBASIC20.7■□□□□ 0.9
ATN1P54259 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ATN1P54259 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
ATN1P54259 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ATN1P54259 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
ATN1P54259 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
ATN1P54259 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
ATN1P54259 AC008556.1-201ENST00000610908 2040 ntBASIC20.7■□□□□ 0.9
ATN1P54259 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ATN1P54259 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC20.69■□□□□ 0.9
ATN1P54259 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
ATN1P54259 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
ATN1P54259 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ATN1P54259 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ATN1P54259 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ATN1P54259 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
ATN1P54259 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC20.69■□□□□ 0.9
ATN1P54259 GUSBP12-201ENST00000513727 720 ntBASIC20.69■□□□□ 0.9
ATN1P54259 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC20.69■□□□□ 0.9
ATN1P54259 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC20.69■□□□□ 0.9
ATN1P54259 IGHV3OR16-7-201ENST00000604106 360 ntBASIC20.69■□□□□ 0.9
ATN1P54259 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC20.69■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms