Protein–RNA interactions for Protein: P25440

BRD2, Bromodomain-containing protein 2, humanhuman

Known RBP Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD2P25440 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
BRD2P25440 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
BRD2P25440 USP39-202ENST00000409025 1946 ntTSL 5 BASIC20.19■□□□□ 0.82
BRD2P25440 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC20.19■□□□□ 0.82
BRD2P25440 AC079598.2-202ENST00000546624 1451 ntBASIC20.19■□□□□ 0.82
BRD2P25440 TNXA-203ENST00000507684 2038 ntBASIC20.19■□□□□ 0.82
BRD2P25440 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
BRD2P25440 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
BRD2P25440 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
BRD2P25440 MFAP1P1-201ENST00000442257 1255 ntBASIC20.19■□□□□ 0.82
BRD2P25440 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
BRD2P25440 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC20.19■□□□□ 0.82
BRD2P25440 AP000525.1-201ENST00000608286 694 ntBASIC20.19■□□□□ 0.82
BRD2P25440 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
BRD2P25440 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC20.19■□□□□ 0.82
BRD2P25440 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
BRD2P25440 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
BRD2P25440 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC20.19■□□□□ 0.82
BRD2P25440 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
BRD2P25440 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
BRD2P25440 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
BRD2P25440 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC20.19■□□□□ 0.82
BRD2P25440 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
BRD2P25440 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
BRD2P25440 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
BRD2P25440 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
BRD2P25440 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC20.19■□□□□ 0.82
BRD2P25440 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC20.19■□□□□ 0.82
BRD2P25440 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
BRD2P25440 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC20.18■□□□□ 0.82
BRD2P25440 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
BRD2P25440 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
BRD2P25440 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC20.18■□□□□ 0.82
BRD2P25440 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
BRD2P25440 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
BRD2P25440 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
BRD2P25440 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC20.18■□□□□ 0.82
BRD2P25440 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
BRD2P25440 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
BRD2P25440 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
BRD2P25440 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC20.18■□□□□ 0.82
BRD2P25440 CRYGFP-201ENST00000418459 633 ntBASIC20.18■□□□□ 0.82
BRD2P25440 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC20.18■□□□□ 0.82
BRD2P25440 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC20.18■□□□□ 0.82
BRD2P25440 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC20.18■□□□□ 0.82
BRD2P25440 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC20.18■□□□□ 0.82
BRD2P25440 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
BRD2P25440 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
BRD2P25440 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC20.18■□□□□ 0.82
BRD2P25440 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
BRD2P25440 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
BRD2P25440 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
BRD2P25440 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
BRD2P25440 AC096733.2-201ENST00000609937 1394 ntBASIC20.18■□□□□ 0.82
BRD2P25440 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
BRD2P25440 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
BRD2P25440 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC20.18■□□□□ 0.82
BRD2P25440 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC20.18■□□□□ 0.82
BRD2P25440 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
BRD2P25440 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
BRD2P25440 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC20.18■□□□□ 0.82
BRD2P25440 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC20.18■□□□□ 0.82
BRD2P25440 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
BRD2P25440 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC20.17■□□□□ 0.82
BRD2P25440 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
BRD2P25440 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC20.17■□□□□ 0.82
BRD2P25440 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
BRD2P25440 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
BRD2P25440 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
BRD2P25440 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
BRD2P25440 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC20.17■□□□□ 0.82
BRD2P25440 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
BRD2P25440 AL390955.1-201ENST00000428694 934 ntBASIC20.17■□□□□ 0.82
BRD2P25440 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
BRD2P25440 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC20.17■□□□□ 0.82
BRD2P25440 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
BRD2P25440 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
BRD2P25440 KRT17P2-201ENST00000300992 1314 ntBASIC20.17■□□□□ 0.82
BRD2P25440 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
BRD2P25440 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
BRD2P25440 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC20.17■□□□□ 0.82
BRD2P25440 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
BRD2P25440 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
BRD2P25440 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
BRD2P25440 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC20.16■□□□□ 0.82
BRD2P25440 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
BRD2P25440 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
BRD2P25440 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC20.16■□□□□ 0.82
BRD2P25440 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC20.16■□□□□ 0.82
BRD2P25440 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
BRD2P25440 UNC93B2-201ENST00000285383 730 ntBASIC20.16■□□□□ 0.82
BRD2P25440 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
BRD2P25440 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC20.16■□□□□ 0.82
BRD2P25440 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
BRD2P25440 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC20.16■□□□□ 0.82
BRD2P25440 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
BRD2P25440 SNX21-213ENST00000614929 587 ntTSL 5 BASIC20.16■□□□□ 0.82
BRD2P25440 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
BRD2P25440 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
BRD2P25440 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC20.16■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms