Protein–RNA interactions for Protein: P17812

CTPS1, CTP synthase 1, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1P17812 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC18.92■□□□□ 0.62
CTPS1P17812 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CTPS1P17812 SLC25A3P1-201ENST00000443844 931 ntBASIC18.92■□□□□ 0.62
CTPS1P17812 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
CTPS1P17812 AC005363.2-201ENST00000618631 242 ntBASIC18.92■□□□□ 0.62
CTPS1P17812 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CTPS1P17812 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CTPS1P17812 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CTPS1P17812 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CTPS1P17812 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC18.92■□□□□ 0.62
CTPS1P17812 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CTPS1P17812 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC18.92■□□□□ 0.62
CTPS1P17812 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CTPS1P17812 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CTPS1P17812 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CTPS1P17812 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CTPS1P17812 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CTPS1P17812 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CTPS1P17812 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC18.91■□□□□ 0.62
CTPS1P17812 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
CTPS1P17812 AC006333.2-201ENST00000607957 2099 ntBASIC18.91■□□□□ 0.62
CTPS1P17812 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC18.91■□□□□ 0.62
CTPS1P17812 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
CTPS1P17812 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CTPS1P17812 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CTPS1P17812 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
CTPS1P17812 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC18.91■□□□□ 0.62
CTPS1P17812 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC18.91■□□□□ 0.62
CTPS1P17812 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC18.91■□□□□ 0.62
CTPS1P17812 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC18.91■□□□□ 0.62
CTPS1P17812 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC18.91■□□□□ 0.62
CTPS1P17812 AC010653.2-201ENST00000623505 997 ntBASIC18.91■□□□□ 0.62
CTPS1P17812 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CTPS1P17812 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
CTPS1P17812 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.91■□□□□ 0.62
CTPS1P17812 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CTPS1P17812 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.91■□□□□ 0.62
CTPS1P17812 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CTPS1P17812 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
CTPS1P17812 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CTPS1P17812 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
CTPS1P17812 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
CTPS1P17812 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CTPS1P17812 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CTPS1P17812 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CTPS1P17812 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC18.9■□□□□ 0.62
CTPS1P17812 AC098818.2-201ENST00000564925 2320 ntBASIC18.9■□□□□ 0.62
CTPS1P17812 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC18.9■□□□□ 0.62
CTPS1P17812 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
CTPS1P17812 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC18.9■□□□□ 0.62
CTPS1P17812 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CTPS1P17812 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CTPS1P17812 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
CTPS1P17812 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
CTPS1P17812 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC18.9■□□□□ 0.62
CTPS1P17812 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC18.9■□□□□ 0.62
CTPS1P17812 AC010203.1-204ENST00000548782 407 ntBASIC18.9■□□□□ 0.62
CTPS1P17812 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
CTPS1P17812 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC18.9■□□□□ 0.62
CTPS1P17812 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC18.9■□□□□ 0.62
CTPS1P17812 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC18.9■□□□□ 0.62
CTPS1P17812 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC18.9■□□□□ 0.62
CTPS1P17812 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC18.9■□□□□ 0.62
CTPS1P17812 KRT8P45-201ENST00000414328 1447 ntBASIC18.9■□□□□ 0.62
CTPS1P17812 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
CTPS1P17812 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC18.9■□□□□ 0.62
CTPS1P17812 RNF165-205ENST00000588679 2904 ntBASIC18.9■□□□□ 0.62
CTPS1P17812 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
CTPS1P17812 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
CTPS1P17812 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
CTPS1P17812 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CTPS1P17812 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CTPS1P17812 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
CTPS1P17812 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CTPS1P17812 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
CTPS1P17812 AC005521.1-201ENST00000393351 872 ntBASIC18.89■□□□□ 0.61
CTPS1P17812 HMGA1P5-201ENST00000412453 271 ntBASIC18.89■□□□□ 0.61
CTPS1P17812 GXYLT1P6-201ENST00000456472 1187 ntBASIC18.89■□□□□ 0.61
CTPS1P17812 PPOX-219ENST00000544598 813 ntTSL 2 BASIC18.89■□□□□ 0.61
CTPS1P17812 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC18.89■□□□□ 0.61
CTPS1P17812 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
CTPS1P17812 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC18.89■□□□□ 0.61
CTPS1P17812 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC18.89■□□□□ 0.61
CTPS1P17812 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CTPS1P17812 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CTPS1P17812 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC18.89■□□□□ 0.61
CTPS1P17812 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CTPS1P17812 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
CTPS1P17812 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC18.88■□□□□ 0.61
CTPS1P17812 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC18.88■□□□□ 0.61
CTPS1P17812 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
CTPS1P17812 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CTPS1P17812 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC18.88■□□□□ 0.61
CTPS1P17812 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CTPS1P17812 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
CTPS1P17812 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC18.88■□□□□ 0.61
CTPS1P17812 KRT18P57-201ENST00000443599 1254 ntBASIC18.88■□□□□ 0.61
CTPS1P17812 MCCD1P1-208ENST00000445732 328 ntBASIC18.88■□□□□ 0.61
CTPS1P17812 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CTPS1P17812 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms