Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 AP000523.1-201ENST00000398242 1049 ntBASIC18.06■□□□□ 0.48
CPNE3O75131 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC18.06■□□□□ 0.48
CPNE3O75131 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC18.06■□□□□ 0.48
CPNE3O75131 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC18.06■□□□□ 0.48
CPNE3O75131 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC18.06■□□□□ 0.48
CPNE3O75131 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC18.06■□□□□ 0.48
CPNE3O75131 CBFB-203ENST00000561924 584 ntTSL 5 BASIC18.06■□□□□ 0.48
CPNE3O75131 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC18.06■□□□□ 0.48
CPNE3O75131 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CPNE3O75131 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
CPNE3O75131 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CPNE3O75131 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC18.06■□□□□ 0.48
CPNE3O75131 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CPNE3O75131 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
CPNE3O75131 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC18.06■□□□□ 0.48
CPNE3O75131 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CPNE3O75131 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC18.06■□□□□ 0.48
CPNE3O75131 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
CPNE3O75131 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CPNE3O75131 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
CPNE3O75131 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CPNE3O75131 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CPNE3O75131 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC18.06■□□□□ 0.48
CPNE3O75131 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
CPNE3O75131 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CPNE3O75131 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CPNE3O75131 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CPNE3O75131 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC18.05■□□□□ 0.48
CPNE3O75131 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CPNE3O75131 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC18.05■□□□□ 0.48
CPNE3O75131 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC18.05■□□□□ 0.48
CPNE3O75131 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CPNE3O75131 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CPNE3O75131 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
CPNE3O75131 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
CPNE3O75131 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CPNE3O75131 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CPNE3O75131 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CPNE3O75131 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CPNE3O75131 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CPNE3O75131 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC18.05■□□□□ 0.48
CPNE3O75131 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CPNE3O75131 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC18.05■□□□□ 0.48
CPNE3O75131 AC140113.3-201ENST00000605663 199 ntBASIC18.05■□□□□ 0.48
CPNE3O75131 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC18.05■□□□□ 0.48
CPNE3O75131 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
CPNE3O75131 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CPNE3O75131 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CPNE3O75131 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CPNE3O75131 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC18.05■□□□□ 0.48
CPNE3O75131 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CPNE3O75131 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CPNE3O75131 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC18.04■□□□□ 0.48
CPNE3O75131 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.04■□□□□ 0.48
CPNE3O75131 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
CPNE3O75131 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CPNE3O75131 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
CPNE3O75131 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
CPNE3O75131 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC18.04■□□□□ 0.48
CPNE3O75131 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CPNE3O75131 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CPNE3O75131 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CPNE3O75131 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC18.04■□□□□ 0.48
CPNE3O75131 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CPNE3O75131 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CPNE3O75131 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC18.04■□□□□ 0.48
CPNE3O75131 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CPNE3O75131 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
CPNE3O75131 SAPCD2P2-201ENST00000431719 1174 ntBASIC18.04■□□□□ 0.48
CPNE3O75131 HOMER2P1-201ENST00000455653 964 ntBASIC18.04■□□□□ 0.48
CPNE3O75131 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CPNE3O75131 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CPNE3O75131 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC18.04■□□□□ 0.48
CPNE3O75131 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC18.04■□□□□ 0.48
CPNE3O75131 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC18.04■□□□□ 0.48
CPNE3O75131 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC18.04■□□□□ 0.48
CPNE3O75131 AC011558.1-201ENST00000623459 338 ntBASIC18.04■□□□□ 0.48
CPNE3O75131 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CPNE3O75131 KRT8P45-201ENST00000414328 1447 ntBASIC18.04■□□□□ 0.48
CPNE3O75131 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CPNE3O75131 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CPNE3O75131 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC18.04■□□□□ 0.48
CPNE3O75131 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC18.04■□□□□ 0.48
CPNE3O75131 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CPNE3O75131 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC18.03■□□□□ 0.48
CPNE3O75131 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CPNE3O75131 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CPNE3O75131 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CPNE3O75131 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CPNE3O75131 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CPNE3O75131 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CPNE3O75131 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CPNE3O75131 BUB3-202ENST00000368859 667 ntTSL 3 BASIC18.03■□□□□ 0.48
CPNE3O75131 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CPNE3O75131 TSPY23P-201ENST00000440136 739 ntBASIC18.03■□□□□ 0.48
CPNE3O75131 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC18.03■□□□□ 0.48
CPNE3O75131 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC18.03■□□□□ 0.48
CPNE3O75131 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC18.03■□□□□ 0.48
CPNE3O75131 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CPNE3O75131 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms