Protein–RNA interactions for Protein: O00533

CHL1, Neural cell adhesion molecule L1-like protein, humanhuman

Predictions only

Length 1,208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1O00533 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC24.22■■□□□ 1.47
CHL1O00533 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC24.22■■□□□ 1.47
CHL1O00533 AC006333.2-201ENST00000607957 2099 ntBASIC24.22■■□□□ 1.47
CHL1O00533 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC24.22■■□□□ 1.47
CHL1O00533 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC24.21■■□□□ 1.47
CHL1O00533 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC24.21■■□□□ 1.47
CHL1O00533 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC24.21■■□□□ 1.47
CHL1O00533 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
CHL1O00533 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
CHL1O00533 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
CHL1O00533 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC24.21■■□□□ 1.47
CHL1O00533 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
CHL1O00533 AC092647.4-201ENST00000457211 535 ntBASIC24.21■■□□□ 1.47
CHL1O00533 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC24.21■■□□□ 1.47
CHL1O00533 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC24.21■■□□□ 1.47
CHL1O00533 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
CHL1O00533 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC24.21■■□□□ 1.47
CHL1O00533 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
CHL1O00533 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC24.21■■□□□ 1.47
CHL1O00533 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
CHL1O00533 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC24.21■■□□□ 1.47
CHL1O00533 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC24.2■■□□□ 1.47
CHL1O00533 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC24.2■■□□□ 1.47
CHL1O00533 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC24.2■■□□□ 1.47
CHL1O00533 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC24.2■■□□□ 1.46
CHL1O00533 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
CHL1O00533 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
CHL1O00533 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC24.2■■□□□ 1.46
CHL1O00533 GRAMD4P1-201ENST00000435181 1110 ntBASIC24.2■■□□□ 1.46
CHL1O00533 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC24.2■■□□□ 1.46
CHL1O00533 AC104390.1-201ENST00000555663 520 ntBASIC24.2■■□□□ 1.46
CHL1O00533 CLN6-204ENST00000564752 900 ntTSL 3 BASIC24.2■■□□□ 1.46
CHL1O00533 RMI2-205ENST00000576027 818 ntTSL 2 BASIC24.2■■□□□ 1.46
CHL1O00533 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
CHL1O00533 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
CHL1O00533 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
CHL1O00533 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC24.2■■□□□ 1.46
CHL1O00533 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
CHL1O00533 AC034236.2-201ENST00000606662 1610 ntBASIC24.2■■□□□ 1.46
CHL1O00533 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC24.2■■□□□ 1.46
CHL1O00533 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC24.2■■□□□ 1.46
CHL1O00533 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
CHL1O00533 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC24.2■■□□□ 1.46
CHL1O00533 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC24.2■■□□□ 1.46
CHL1O00533 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
CHL1O00533 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
CHL1O00533 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC24.19■■□□□ 1.46
CHL1O00533 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
CHL1O00533 Z98044.1-201ENST00000632503 1764 ntBASIC24.19■■□□□ 1.46
CHL1O00533 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC24.19■■□□□ 1.46
CHL1O00533 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
CHL1O00533 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
CHL1O00533 KRT18P23-201ENST00000435622 1283 ntBASIC24.19■■□□□ 1.46
CHL1O00533 RASA4DP-201ENST00000460726 1199 ntBASIC24.19■■□□□ 1.46
CHL1O00533 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC24.19■■□□□ 1.46
CHL1O00533 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC24.19■■□□□ 1.46
CHL1O00533 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC24.19■■□□□ 1.46
CHL1O00533 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC24.19■■□□□ 1.46
CHL1O00533 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
CHL1O00533 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
CHL1O00533 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
CHL1O00533 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
CHL1O00533 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC24.18■■□□□ 1.46
CHL1O00533 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC24.18■■□□□ 1.46
CHL1O00533 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC24.18■■□□□ 1.46
CHL1O00533 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
CHL1O00533 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
CHL1O00533 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC24.18■■□□□ 1.46
CHL1O00533 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
CHL1O00533 COPE-203ENST00000351079 907 ntTSL 2 BASIC24.18■■□□□ 1.46
CHL1O00533 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC24.18■■□□□ 1.46
CHL1O00533 AC087388.1-201ENST00000571370 1112 ntBASIC24.18■■□□□ 1.46
CHL1O00533 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
CHL1O00533 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
CHL1O00533 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
CHL1O00533 MED25-212ENST00000618715 1467 ntTSL 5 BASIC24.18■■□□□ 1.46
CHL1O00533 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC24.18■■□□□ 1.46
CHL1O00533 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC24.17■■□□□ 1.46
CHL1O00533 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
CHL1O00533 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC24.17■■□□□ 1.46
CHL1O00533 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC24.17■■□□□ 1.46
CHL1O00533 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC24.17■■□□□ 1.46
CHL1O00533 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC24.17■■□□□ 1.46
CHL1O00533 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
CHL1O00533 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC24.17■■□□□ 1.46
CHL1O00533 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC24.17■■□□□ 1.46
CHL1O00533 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC24.17■■□□□ 1.46
CHL1O00533 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
CHL1O00533 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC24.17■■□□□ 1.46
CHL1O00533 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC24.17■■□□□ 1.46
CHL1O00533 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC24.17■■□□□ 1.46
CHL1O00533 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC24.17■■□□□ 1.46
CHL1O00533 KRT18P41-201ENST00000518924 1277 ntBASIC24.17■■□□□ 1.46
CHL1O00533 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC24.17■■□□□ 1.46
CHL1O00533 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC24.17■■□□□ 1.46
CHL1O00533 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC24.17■■□□□ 1.46
CHL1O00533 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC24.17■■□□□ 1.46
CHL1O00533 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
CHL1O00533 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC24.17■■□□□ 1.46
CHL1O00533 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC24.17■■□□□ 1.46
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms