Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 RNU6-772P-201ENST00000516042 105 ntBASIC-1.63□□□□□ -2.67
UPK1BO75841 MIR4520-1-201ENST00000582609 70 ntBASIC-1.63□□□□□ -2.67
UPK1BO75841 CYP3A54P-201ENST00000566950 75 ntBASIC-1.64□□□□□ -2.67
UPK1BO75841 MIR3657-201ENST00000584818 117 ntBASIC-1.64□□□□□ -2.67
UPK1BO75841 MIR1246-201ENST00000636535 73 ntBASIC-1.64□□□□□ -2.67
UPK1BO75841 AL157777.2-201ENST00000258070 137 ntBASIC-1.65□□□□□ -2.67
UPK1BO75841 RNU6-924P-201ENST00000362926 108 ntBASIC-1.65□□□□□ -2.67
UPK1BO75841 RNU6-426P-201ENST00000516464 97 ntBASIC-1.65□□□□□ -2.67
UPK1BO75841 MIR3144-201ENST00000579460 79 ntBASIC-1.65□□□□□ -2.67
UPK1BO75841 AC004792.1-201ENST00000614523 137 ntBASIC-1.65□□□□□ -2.67
UPK1BO75841 SNORA2.1-201ENST00000363089 137 ntBASIC-1.66□□□□□ -2.68
UPK1BO75841 MIR527-201ENST00000385244 85 ntBASIC-1.66□□□□□ -2.68
UPK1BO75841 RNU6-795P-201ENST00000516323 103 ntBASIC-1.66□□□□□ -2.68
UPK1BO75841 Y_RNA.698-201ENST00000516798 118 ntBASIC-1.66□□□□□ -2.68
UPK1BO75841 MIR5009-201ENST00000578736 100 ntBASIC-1.66□□□□□ -2.68
UPK1BO75841 MIR4777-201ENST00000583710 86 ntBASIC-1.66□□□□□ -2.68
UPK1BO75841 RNU5F-1-201ENST00000362507 117 ntBASIC-1.67□□□□□ -2.68
UPK1BO75841 Y_RNA.181-201ENST00000363872 101 ntBASIC-1.67□□□□□ -2.68
UPK1BO75841 RNU6-746P-201ENST00000384112 109 ntBASIC-1.67□□□□□ -2.68
UPK1BO75841 AL691482.2-201ENST00000457453 84 ntBASIC-1.67□□□□□ -2.68
UPK1BO75841 RNU6-1014P-201ENST00000383940 103 ntBASIC-1.68□□□□□ -2.68
UPK1BO75841 RNA5SP266-201ENST00000410273 108 ntBASIC-1.68□□□□□ -2.68
UPK1BO75841 Y_RNA.649-201ENST00000459077 103 ntBASIC-1.68□□□□□ -2.68
UPK1BO75841 SNORD63.1-201ENST00000516178 80 ntBASIC-1.68□□□□□ -2.68
UPK1BO75841 AC012531.4-201ENST00000616509 177 ntBASIC-1.68□□□□□ -2.68
UPK1BO75841 Y_RNA.250-201ENST00000364542 110 ntBASIC-1.69□□□□□ -2.68
UPK1BO75841 MIR1285-2-201ENST00000408311 88 ntBASIC-1.69□□□□□ -2.68
UPK1BO75841 MTND4LP9-201ENST00000427694 174 ntBASIC-1.69□□□□□ -2.68
UPK1BO75841 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-1.69□□□□□ -2.68
UPK1BO75841 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-1.69□□□□□ -2.68
UPK1BO75841 SNORA26.4-201ENST00000391188 123 ntBASIC-1.7□□□□□ -2.68
UPK1BO75841 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC-1.7□□□□□ -2.68
UPK1BO75841 RNU6-1045P-201ENST00000516321 107 ntBASIC-1.7□□□□□ -2.68
UPK1BO75841 Y_RNA.10-201ENST00000362371 110 ntBASIC-1.71□□□□□ -2.68
UPK1BO75841 RNU6-379P-201ENST00000363813 104 ntBASIC-1.71□□□□□ -2.68
UPK1BO75841 Y_RNA.232-201ENST00000364369 96 ntBASIC-1.71□□□□□ -2.68
UPK1BO75841 Y_RNA.488-201ENST00000384403 102 ntBASIC-1.71□□□□□ -2.68
UPK1BO75841 Y_RNA.525-201ENST00000384570 113 ntBASIC-1.71□□□□□ -2.68
UPK1BO75841 MTND5P41-201ENST00000517498 206 ntBASIC-1.71□□□□□ -2.68
UPK1BO75841 DLEU2_3.2-201ENST00000612883 73 ntBASIC-1.71□□□□□ -2.68
UPK1BO75841 MIR6502-201ENST00000617296 76 ntBASIC-1.71□□□□□ -2.68
UPK1BO75841 SNORD115-33-201ENST00000363723 82 ntBASIC-1.72□□□□□ -2.68
UPK1BO75841 Y_RNA.442-201ENST00000384131 102 ntBASIC-1.72□□□□□ -2.68
UPK1BO75841 RNU6-576P-201ENST00000390854 102 ntBASIC-1.72□□□□□ -2.68
UPK1BO75841 RNU2-51P-201ENST00000410708 197 ntBASIC-1.72□□□□□ -2.68
UPK1BO75841 RNU7-107P-201ENST00000459121 61 ntBASIC-1.72□□□□□ -2.68
UPK1BO75841 RNU6-158P-201ENST00000517104 100 ntBASIC-1.72□□□□□ -2.68
UPK1BO75841 MIR6818-201ENST00000621576 65 ntBASIC-1.72□□□□□ -2.68
UPK1BO75841 MIR29B1-201ENST00000385015 81 ntBASIC-1.73□□□□□ -2.69
UPK1BO75841 RNU6ATAC23P-201ENST00000408448 123 ntBASIC-1.73□□□□□ -2.69
UPK1BO75841 RNU6-388P-201ENST00000517012 105 ntBASIC-1.73□□□□□ -2.69
UPK1BO75841 RNU6-389P-201ENST00000517048 105 ntBASIC-1.73□□□□□ -2.69
UPK1BO75841 RNU6-1011P-201ENST00000384668 107 ntBASIC-1.74□□□□□ -2.69
UPK1BO75841 Y_RNA.700-201ENST00000516806 100 ntBASIC-1.74□□□□□ -2.69
UPK1BO75841 RNU6-1233P-201ENST00000362922 102 ntBASIC-1.75□□□□□ -2.69
UPK1BO75841 Y_RNA.162-201ENST00000363683 102 ntBASIC-1.75□□□□□ -2.69
UPK1BO75841 MIR521-2-201ENST00000384818 87 ntBASIC-1.75□□□□□ -2.69
UPK1BO75841 MIR519A2-201ENST00000384990 87 ntBASIC-1.75□□□□□ -2.69
UPK1BO75841 RNU6-1211P-201ENST00000459179 105 ntBASIC-1.75□□□□□ -2.69
UPK1BO75841 U6.81-201ENST00000612550 106 ntBASIC-1.75□□□□□ -2.69
UPK1BO75841 SNORD115-22-201ENST00000364456 82 ntBASIC-1.76□□□□□ -2.69
UPK1BO75841 Y_RNA.457-201ENST00000384237 111 ntBASIC-1.76□□□□□ -2.69
UPK1BO75841 RNU6-540P-201ENST00000384622 101 ntBASIC-1.76□□□□□ -2.69
UPK1BO75841 RNU4-61P-201ENST00000411243 107 ntBASIC-1.76□□□□□ -2.69
UPK1BO75841 RNU7-154P-201ENST00000516194 62 ntBASIC-1.76□□□□□ -2.69
UPK1BO75841 RNU6-412P-201ENST00000516434 106 ntBASIC-1.76□□□□□ -2.69
UPK1BO75841 AC091912.2-201ENST00000624798 167 ntBASIC-1.76□□□□□ -2.69
UPK1BO75841 Y_RNA.188-201ENST00000363952 111 ntBASIC-1.77□□□□□ -2.69
UPK1BO75841 SNORD58A-201ENST00000383875 65 ntBASIC-1.77□□□□□ -2.69
UPK1BO75841 Y_RNA.558-201ENST00000384685 113 ntBASIC-1.77□□□□□ -2.69
UPK1BO75841 Y_RNA.705-201ENST00000516862 110 ntBASIC-1.77□□□□□ -2.69
UPK1BO75841 MIR4796-201ENST00000580742 81 ntBASIC-1.77□□□□□ -2.69
UPK1BO75841 Y_RNA.613-201ENST00000410726 97 ntBASIC-1.78□□□□□ -2.69
UPK1BO75841 RNU6-518P-201ENST00000516056 96 ntBASIC-1.78□□□□□ -2.69
UPK1BO75841 SNORD33.1-201ENST00000516213 88 ntBASIC-1.78□□□□□ -2.69
UPK1BO75841 RNU6-463P-201ENST00000384340 107 ntBASIC-1.79□□□□□ -2.7
UPK1BO75841 SNORA40-201ENST00000388090 126 ntBASIC-1.79□□□□□ -2.7
UPK1BO75841 RNA5SP86-201ENST00000390869 98 ntBASIC-1.79□□□□□ -2.7
UPK1BO75841 SCARNA15.1-201ENST00000516384 125 ntBASIC-1.79□□□□□ -2.7
UPK1BO75841 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC-1.79□□□□□ -2.7
UPK1BO75841 MIR6874-201ENST00000635894 71 ntBASIC-1.79□□□□□ -2.7
UPK1BO75841 MIR365A-201ENST00000362260 87 ntBASIC-1.8□□□□□ -2.7
UPK1BO75841 RNU6-972P-201ENST00000391208 107 ntBASIC-1.8□□□□□ -2.7
UPK1BO75841 RNU6-257P-201ENST00000410238 98 ntBASIC-1.8□□□□□ -2.7
UPK1BO75841 SNORA19.1-201ENST00000410656 129 ntBASIC-1.8□□□□□ -2.7
UPK1BO75841 RNU6-887P-201ENST00000410660 100 ntBASIC-1.8□□□□□ -2.7
UPK1BO75841 MIR4441-201ENST00000582623 100 ntBASIC-1.8□□□□□ -2.7
UPK1BO75841 MIR548A3-201ENST00000385297 97 ntBASIC-1.81□□□□□ -2.7
UPK1BO75841 SNX3P1X-201ENST00000414887 175 ntBASIC-1.81□□□□□ -2.7
UPK1BO75841 AL353691.2-201ENST00000443795 59 ntBASIC-1.81□□□□□ -2.7
UPK1BO75841 MIR3914-2-201ENST00000637339 95 ntBASIC-1.81□□□□□ -2.7
UPK1BO75841 MIR507-201ENST00000385234 94 ntBASIC-1.82□□□□□ -2.7
UPK1BO75841 MIR601-201ENST00000385256 79 ntBASIC-1.82□□□□□ -2.7
UPK1BO75841 RNU6-983P-201ENST00000516004 103 ntBASIC-1.82□□□□□ -2.7
UPK1BO75841 SCARNA23-201ENST00000516060 130 ntBASIC-1.82□□□□□ -2.7
UPK1BO75841 FAS-AS1.1-201ENST00000615327 126 ntBASIC-1.82□□□□□ -2.7
UPK1BO75841 MIR6739-201ENST00000622461 75 ntBASIC-1.82□□□□□ -2.7
UPK1BO75841 MIR198-201ENST00000637333 62 ntBASIC-1.82□□□□□ -2.7
UPK1BO75841 SNORD18.1-201ENST00000363807 70 ntBASIC-1.83□□□□□ -2.7
UPK1BO75841 Y_RNA.426-201ENST00000384068 113 ntBASIC-1.83□□□□□ -2.7
Retrieved 100 of 98,524 protein–RNA pairs in 170.8 ms