Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 AC245884.12-201ENST00000615364 59 ntBASIC1.8□□□□□ -2.12
GFRA3O60609 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.8□□□□□ -2.12
GFRA3O60609 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC1.8□□□□□ -2.12
GFRA3O60609 MIR6828-201ENST00000636181 60 ntBASIC1.8□□□□□ -2.12
GFRA3O60609 RNU6-530P-201ENST00000391180 107 ntBASIC1.79□□□□□ -2.12
GFRA3O60609 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.79□□□□□ -2.12
GFRA3O60609 AC244090.1-201ENST00000441884 93 ntBASIC1.79□□□□□ -2.12
GFRA3O60609 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.79□□□□□ -2.12
GFRA3O60609 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC1.78□□□□□ -2.12
GFRA3O60609 SNORA49-201ENST00000386157 136 ntBASIC1.78□□□□□ -2.12
GFRA3O60609 RNU6-910P-201ENST00000390844 107 ntBASIC1.78□□□□□ -2.12
GFRA3O60609 AC006210.1-201ENST00000424882 111 ntBASIC1.78□□□□□ -2.12
GFRA3O60609 AC079804.2-201ENST00000490376 200 ntBASIC1.78□□□□□ -2.12
GFRA3O60609 RN7SKP88-201ENST00000516847 250 ntBASIC1.78□□□□□ -2.12
GFRA3O60609 RNU6-1223P-201ENST00000517124 104 ntBASIC1.78□□□□□ -2.12
GFRA3O60609 MIR4255-201ENST00000579351 72 ntBASIC1.78□□□□□ -2.12
GFRA3O60609 MIR5694-201ENST00000581190 76 ntBASIC1.78□□□□□ -2.12
GFRA3O60609 7SK.8-201ENST00000612110 250 ntBASIC1.78□□□□□ -2.12
GFRA3O60609 7SK.13-201ENST00000622040 250 ntBASIC1.78□□□□□ -2.12
GFRA3O60609 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC1.78□□□□□ -2.12
GFRA3O60609 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.78□□□□□ -2.12
GFRA3O60609 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.78□□□□□ -2.13
GFRA3O60609 MIRLET7B-201ENST00000385140 83 ntBASIC1.77□□□□□ -2.13
GFRA3O60609 SNORD53B-201ENST00000577887 78 ntBASIC1.77□□□□□ -2.13
GFRA3O60609 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.77□□□□□ -2.13
GFRA3O60609 MIR20A-201ENST00000362279 71 ntBASIC1.76□□□□□ -2.13
GFRA3O60609 SNORD57-201ENST00000448188 72 ntBASIC1.76□□□□□ -2.13
GFRA3O60609 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC1.76□□□□□ -2.13
GFRA3O60609 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
GFRA3O60609 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
GFRA3O60609 SNORD23.1-201ENST00000408212 104 ntBASIC1.75□□□□□ -2.13
GFRA3O60609 RNA5SP61-201ENST00000516453 100 ntBASIC1.75□□□□□ -2.13
GFRA3O60609 MIR6507-201ENST00000613630 70 ntBASIC1.75□□□□□ -2.13
GFRA3O60609 MIR4317-201ENST00000637586 65 ntBASIC1.75□□□□□ -2.13
GFRA3O60609 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
GFRA3O60609 RNU1-42P-201ENST00000364033 160 ntBASIC1.74□□□□□ -2.13
GFRA3O60609 MIR5002-201ENST00000584713 97 ntBASIC1.74□□□□□ -2.13
GFRA3O60609 RNY1P8-201ENST00000383970 114 ntBASIC1.73□□□□□ -2.13
GFRA3O60609 HMGN2P22-201ENST00000427588 175 ntBASIC1.73□□□□□ -2.13
GFRA3O60609 RNU6-717P-201ENST00000459076 104 ntBASIC1.73□□□□□ -2.13
GFRA3O60609 RNU1-40P-201ENST00000516816 164 ntBASIC1.73□□□□□ -2.13
GFRA3O60609 RNU1-97P-201ENST00000516872 164 ntBASIC1.73□□□□□ -2.13
GFRA3O60609 AP000553.5-201ENST00000641933 54 ntBASIC1.73□□□□□ -2.13
GFRA3O60609 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.72□□□□□ -2.13
GFRA3O60609 RNU6-1047P-201ENST00000364418 107 ntBASIC1.72□□□□□ -2.13
GFRA3O60609 AL354695.1-201ENST00000427935 228 ntBASIC1.72□□□□□ -2.13
GFRA3O60609 Y_RNA.698-201ENST00000516798 118 ntBASIC1.72□□□□□ -2.13
GFRA3O60609 MIR4421-201ENST00000578133 69 ntBASIC1.72□□□□□ -2.13
GFRA3O60609 SNORA70.25-201ENST00000612741 95 ntBASIC1.72□□□□□ -2.13
GFRA3O60609 RNU4-52P-201ENST00000384209 138 ntBASIC1.71□□□□□ -2.14
GFRA3O60609 SNORD63.2-201ENST00000516303 64 ntBASIC1.71□□□□□ -2.14
GFRA3O60609 MIR96-201ENST00000362288 78 ntBASIC1.7□□□□□ -2.14
GFRA3O60609 RNU6-502P-201ENST00000362419 108 ntBASIC1.7□□□□□ -2.14
GFRA3O60609 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.7□□□□□ -2.14
GFRA3O60609 SNORD2-201ENST00000459163 69 ntBASIC1.7□□□□□ -2.14
GFRA3O60609 RNU6-1110P-201ENST00000516462 101 ntBASIC1.7□□□□□ -2.14
GFRA3O60609 MIR151B-201ENST00000584249 96 ntBASIC1.7□□□□□ -2.14
GFRA3O60609 AL353803.5-201ENST00000599815 141 ntBASIC1.7□□□□□ -2.14
GFRA3O60609 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
GFRA3O60609 RNA5SP338-201ENST00000410495 85 ntBASIC1.69□□□□□ -2.14
GFRA3O60609 RPS29P1-201ENST00000465274 159 ntBASIC1.69□□□□□ -2.14
GFRA3O60609 U7.5-201ENST00000517224 61 ntBASIC1.69□□□□□ -2.14
GFRA3O60609 MIR3170-201ENST00000582699 77 ntBASIC1.69□□□□□ -2.14
GFRA3O60609 MIR6840-201ENST00000611937 71 ntBASIC1.69□□□□□ -2.14
GFRA3O60609 Y_RNA.68-201ENST00000362881 102 ntBASIC1.68□□□□□ -2.14
GFRA3O60609 SNORA36.1-201ENST00000363424 132 ntBASIC1.68□□□□□ -2.14
GFRA3O60609 RNA5SP160-201ENST00000364866 120 ntBASIC1.68□□□□□ -2.14
GFRA3O60609 MIR30A-201ENST00000385092 71 ntBASIC1.68□□□□□ -2.14
GFRA3O60609 SNORD105-201ENST00000386910 85 ntBASIC1.68□□□□□ -2.14
GFRA3O60609 SNORA67.6-201ENST00000391093 99 ntBASIC1.68□□□□□ -2.14
GFRA3O60609 RNA5SP227-201ENST00000516184 113 ntBASIC1.68□□□□□ -2.14
GFRA3O60609 RNU6-782P-201ENST00000516852 104 ntBASIC1.68□□□□□ -2.14
GFRA3O60609 MIR6078-201ENST00000611069 100 ntBASIC1.68□□□□□ -2.14
GFRA3O60609 MIR520E-201ENST00000384867 87 ntBASIC1.67□□□□□ -2.14
GFRA3O60609 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
GFRA3O60609 MIR4299-201ENST00000577899 72 ntBASIC1.67□□□□□ -2.14
GFRA3O60609 MIR3612-201ENST00000579753 87 ntBASIC1.67□□□□□ -2.14
GFRA3O60609 AL353770.2-201ENST00000620024 78 ntBASIC1.67□□□□□ -2.14
GFRA3O60609 SNORD89-201ENST00000390981 114 ntBASIC1.66□□□□□ -2.14
GFRA3O60609 RNU6-1174P-201ENST00000517278 101 ntBASIC1.66□□□□□ -2.14
GFRA3O60609 AC108676.2-201ENST00000605225 163 ntBASIC1.66□□□□□ -2.14
GFRA3O60609 MIR6788-201ENST00000618842 66 ntBASIC1.66□□□□□ -2.14
GFRA3O60609 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.65□□□□□ -2.14
GFRA3O60609 RNU1-93P-201ENST00000364704 169 ntBASIC1.64□□□□□ -2.15
GFRA3O60609 MIR573-201ENST00000384964 99 ntBASIC1.64□□□□□ -2.15
GFRA3O60609 RNU1-78P-201ENST00000391248 165 ntBASIC1.64□□□□□ -2.15
GFRA3O60609 AC002429.1-201ENST00000437672 148 ntBASIC1.64□□□□□ -2.15
GFRA3O60609 RNU7-88P-201ENST00000458752 63 ntBASIC1.64□□□□□ -2.15
GFRA3O60609 RNU6-175P-201ENST00000516896 107 ntBASIC1.64□□□□□ -2.15
GFRA3O60609 MIR4432-201ENST00000581823 84 ntBASIC1.64□□□□□ -2.15
GFRA3O60609 RN7SL793P-201ENST00000583259 296 ntBASIC1.64□□□□□ -2.15
GFRA3O60609 Y_RNA.321-201ENST00000365149 102 ntBASIC1.63□□□□□ -2.15
GFRA3O60609 SNORD63.1-201ENST00000516178 80 ntBASIC1.63□□□□□ -2.15
GFRA3O60609 RNU6-258P-201ENST00000390884 101 ntBASIC1.62□□□□□ -2.15
GFRA3O60609 RNA5SP268-201ENST00000516828 124 ntBASIC1.62□□□□□ -2.15
GFRA3O60609 MIR4752-201ENST00000579672 72 ntBASIC1.62□□□□□ -2.15
GFRA3O60609 RNU1-29P-201ENST00000606574 126 ntBASIC1.62□□□□□ -2.15
GFRA3O60609 MIR7107-201ENST00000611489 80 ntBASIC1.62□□□□□ -2.15
GFRA3O60609 SNORD115-23-201ENST00000364461 82 ntBASIC1.61□□□□□ -2.15
GFRA3O60609 Y_RNA.433-201ENST00000384089 102 ntBASIC1.61□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 15.8 ms