Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 RNU6-1039P-201ENST00000383931 107 ntBASIC-1.56□□□□□ -2.66
UPK1AO00322 RNU6-540P-201ENST00000384622 101 ntBASIC-1.56□□□□□ -2.66
UPK1AO00322 Y_RNA.604-201ENST00000410574 102 ntBASIC-1.56□□□□□ -2.66
UPK1AO00322 MIR4503-201ENST00000582187 83 ntBASIC-1.56□□□□□ -2.66
UPK1AO00322 MIR6502-201ENST00000617296 76 ntBASIC-1.56□□□□□ -2.66
UPK1AO00322 AL157777.2-201ENST00000258070 137 ntBASIC-1.57□□□□□ -2.66
UPK1AO00322 Y_RNA.232-201ENST00000364369 96 ntBASIC-1.57□□□□□ -2.66
UPK1AO00322 RNU6-200P-201ENST00000364743 107 ntBASIC-1.57□□□□□ -2.66
UPK1AO00322 Y_RNA.563-201ENST00000384707 108 ntBASIC-1.57□□□□□ -2.66
UPK1AO00322 MIR569-201ENST00000385228 96 ntBASIC-1.57□□□□□ -2.66
UPK1AO00322 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC-1.57□□□□□ -2.66
UPK1AO00322 RNU6-394P-201ENST00000410735 107 ntBASIC-1.57□□□□□ -2.66
UPK1AO00322 AL691482.2-201ENST00000457453 84 ntBASIC-1.57□□□□□ -2.66
UPK1AO00322 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-1.57□□□□□ -2.66
UPK1AO00322 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-1.58□□□□□ -2.66
UPK1AO00322 Y_RNA.630-201ENST00000411370 108 ntBASIC-1.58□□□□□ -2.66
UPK1AO00322 RNU6-412P-201ENST00000516434 106 ntBASIC-1.58□□□□□ -2.66
UPK1AO00322 CYP3A54P-201ENST00000566950 75 ntBASIC-1.58□□□□□ -2.66
UPK1AO00322 MIR5009-201ENST00000578736 100 ntBASIC-1.58□□□□□ -2.66
UPK1AO00322 MIR365A-201ENST00000362260 87 ntBASIC-1.59□□□□□ -2.66
UPK1AO00322 SNORD115-33-201ENST00000363723 82 ntBASIC-1.59□□□□□ -2.66
UPK1AO00322 Y_RNA.457-201ENST00000384237 111 ntBASIC-1.59□□□□□ -2.66
UPK1AO00322 SNORD90-201ENST00000391145 111 ntBASIC-1.59□□□□□ -2.66
UPK1AO00322 SNX3P1X-201ENST00000414887 175 ntBASIC-1.59□□□□□ -2.66
UPK1AO00322 RNU6-772P-201ENST00000516042 105 ntBASIC-1.59□□□□□ -2.66
UPK1AO00322 MIR3657-201ENST00000584818 117 ntBASIC-1.59□□□□□ -2.66
UPK1AO00322 RNU6-804P-201ENST00000384286 107 ntBASIC-1.6□□□□□ -2.67
UPK1AO00322 MIR601-201ENST00000385256 79 ntBASIC-1.6□□□□□ -2.67
UPK1AO00322 RNU6-576P-201ENST00000390854 102 ntBASIC-1.6□□□□□ -2.67
UPK1AO00322 SNORA26.4-201ENST00000391188 123 ntBASIC-1.6□□□□□ -2.67
UPK1AO00322 RNA5SP272-201ENST00000516095 111 ntBASIC-1.6□□□□□ -2.67
UPK1AO00322 MIR4441-201ENST00000582623 100 ntBASIC-1.6□□□□□ -2.67
UPK1AO00322 MIR6818-201ENST00000621576 65 ntBASIC-1.6□□□□□ -2.67
UPK1AO00322 RNU6-824P-201ENST00000363724 104 ntBASIC-1.61□□□□□ -2.67
UPK1AO00322 Y_RNA.398-201ENST00000383952 99 ntBASIC-1.61□□□□□ -2.67
UPK1AO00322 RNU4-61P-201ENST00000411243 107 ntBASIC-1.61□□□□□ -2.67
UPK1AO00322 Y_RNA.649-201ENST00000459077 103 ntBASIC-1.61□□□□□ -2.67
UPK1AO00322 HAR1A.1-201ENST00000459583 118 ntBASIC-1.61□□□□□ -2.67
UPK1AO00322 Y_RNA.700-201ENST00000516806 100 ntBASIC-1.61□□□□□ -2.67
UPK1AO00322 MIR3144-201ENST00000579460 79 ntBASIC-1.61□□□□□ -2.67
UPK1AO00322 AC091912.2-201ENST00000624798 167 ntBASIC-1.61□□□□□ -2.67
UPK1AO00322 MIR6874-201ENST00000635894 71 ntBASIC-1.61□□□□□ -2.67
UPK1AO00322 Y_RNA.488-201ENST00000384403 102 ntBASIC-1.62□□□□□ -2.67
UPK1AO00322 Y_RNA.543-201ENST00000384649 107 ntBASIC-1.62□□□□□ -2.67
UPK1AO00322 RNU6-1045P-201ENST00000516321 107 ntBASIC-1.62□□□□□ -2.67
UPK1AO00322 AC004792.1-201ENST00000614523 137 ntBASIC-1.62□□□□□ -2.67
UPK1AO00322 RNU6-1233P-201ENST00000362922 102 ntBASIC-1.63□□□□□ -2.67
UPK1AO00322 RNU6-1014P-201ENST00000383940 103 ntBASIC-1.63□□□□□ -2.67
UPK1AO00322 Y_RNA.426-201ENST00000384068 113 ntBASIC-1.63□□□□□ -2.67
UPK1AO00322 RNU6-983P-201ENST00000516004 103 ntBASIC-1.64□□□□□ -2.67
UPK1AO00322 SNORD63.1-201ENST00000516178 80 ntBASIC-1.64□□□□□ -2.67
UPK1AO00322 RNU7-154P-201ENST00000516194 62 ntBASIC-1.64□□□□□ -2.67
UPK1AO00322 RNU6-795P-201ENST00000516323 103 ntBASIC-1.64□□□□□ -2.67
UPK1AO00322 RNU6-426P-201ENST00000516464 97 ntBASIC-1.64□□□□□ -2.67
UPK1AO00322 RNU6-746P-201ENST00000384112 109 ntBASIC-1.65□□□□□ -2.67
UPK1AO00322 RNU6-574P-201ENST00000384265 107 ntBASIC-1.65□□□□□ -2.67
UPK1AO00322 RNU6-1011P-201ENST00000384668 107 ntBASIC-1.65□□□□□ -2.67
UPK1AO00322 RNA5SP86-201ENST00000390869 98 ntBASIC-1.65□□□□□ -2.67
UPK1AO00322 MIR548H1-201ENST00000408610 102 ntBASIC-1.65□□□□□ -2.67
UPK1AO00322 MIR4777-201ENST00000583710 86 ntBASIC-1.65□□□□□ -2.67
UPK1AO00322 MIR521-2-201ENST00000384818 87 ntBASIC-1.66□□□□□ -2.68
UPK1AO00322 Y_RNA.705-201ENST00000516862 110 ntBASIC-1.66□□□□□ -2.68
UPK1AO00322 SNORD18.1-201ENST00000363807 70 ntBASIC-1.67□□□□□ -2.68
UPK1AO00322 MTND4LP9-201ENST00000427694 174 ntBASIC-1.67□□□□□ -2.68
UPK1AO00322 Y_RNA.698-201ENST00000516798 118 ntBASIC-1.67□□□□□ -2.68
UPK1AO00322 DLEU2_3.2-201ENST00000612883 73 ntBASIC-1.67□□□□□ -2.68
UPK1AO00322 MIR198-201ENST00000637333 62 ntBASIC-1.67□□□□□ -2.68
UPK1AO00322 Y_RNA.96-201ENST00000363092 109 ntBASIC-1.68□□□□□ -2.68
UPK1AO00322 SNORA40-201ENST00000388090 126 ntBASIC-1.68□□□□□ -2.68
UPK1AO00322 RNU6-972P-201ENST00000391208 107 ntBASIC-1.68□□□□□ -2.68
UPK1AO00322 Y_RNA.613-201ENST00000410726 97 ntBASIC-1.68□□□□□ -2.68
UPK1AO00322 AL353691.2-201ENST00000443795 59 ntBASIC-1.68□□□□□ -2.68
UPK1AO00322 AC012531.4-201ENST00000616509 177 ntBASIC-1.68□□□□□ -2.68
UPK1AO00322 Y_RNA.162-201ENST00000363683 102 ntBASIC-1.69□□□□□ -2.68
UPK1AO00322 RNU6-379P-201ENST00000363813 104 ntBASIC-1.69□□□□□ -2.68
UPK1AO00322 Y_RNA.188-201ENST00000363952 111 ntBASIC-1.69□□□□□ -2.68
UPK1AO00322 Y_RNA.616-201ENST00000410835 95 ntBASIC-1.69□□□□□ -2.68
UPK1AO00322 RNU6-1333P-201ENST00000516162 93 ntBASIC-1.69□□□□□ -2.68
UPK1AO00322 U6.81-201ENST00000612550 106 ntBASIC-1.69□□□□□ -2.68
UPK1AO00322 RNU6-704P-201ENST00000364162 103 ntBASIC-1.7□□□□□ -2.68
UPK1AO00322 SNORD58A-201ENST00000383875 65 ntBASIC-1.7□□□□□ -2.68
UPK1AO00322 RNU6ATAC23P-201ENST00000408448 123 ntBASIC-1.7□□□□□ -2.68
UPK1AO00322 RNU6-1211P-201ENST00000459179 105 ntBASIC-1.7□□□□□ -2.68
UPK1AO00322 RNU6-518P-201ENST00000516056 96 ntBASIC-1.7□□□□□ -2.68
UPK1AO00322 RNU6-388P-201ENST00000517012 105 ntBASIC-1.7□□□□□ -2.68
UPK1AO00322 RNU6-389P-201ENST00000517048 105 ntBASIC-1.7□□□□□ -2.68
UPK1AO00322 MIR4796-201ENST00000580742 81 ntBASIC-1.7□□□□□ -2.68
UPK1AO00322 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC-1.7□□□□□ -2.68
UPK1AO00322 RNA5SP26-201ENST00000362406 119 ntBASIC-1.71□□□□□ -2.68
UPK1AO00322 Y_RNA.180-201ENST00000363867 113 ntBASIC-1.71□□□□□ -2.68
UPK1AO00322 MIR519A2-201ENST00000384990 87 ntBASIC-1.71□□□□□ -2.68
UPK1AO00322 MIR548A3-201ENST00000385297 97 ntBASIC-1.71□□□□□ -2.68
UPK1AO00322 RNU6-887P-201ENST00000410660 100 ntBASIC-1.71□□□□□ -2.68
UPK1AO00322 RNU6-228P-201ENST00000362700 106 ntBASIC-1.72□□□□□ -2.68
UPK1AO00322 RNU6-463P-201ENST00000384340 107 ntBASIC-1.72□□□□□ -2.68
UPK1AO00322 Y_RNA.558-201ENST00000384685 113 ntBASIC-1.72□□□□□ -2.68
UPK1AO00322 AL353621.2-201ENST00000605340 133 ntBASIC-1.72□□□□□ -2.68
UPK1AO00322 Y_RNA.343-201ENST00000365354 112 ntBASIC-1.73□□□□□ -2.69
UPK1AO00322 MIR487B-201ENST00000385021 84 ntBASIC-1.73□□□□□ -2.69
UPK1AO00322 MIR507-201ENST00000385234 94 ntBASIC-1.73□□□□□ -2.69
Retrieved 100 of 98,524 protein–RNA pairs in 169.6 ms