Protein–RNA interactions for Protein: Q9H7N4

SCAF1, Splicing factor, arginine/serine-rich 19, humanhuman

Known RBP Predictions only

Length 1,312 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1Q9H7N4 AC012493.3-201ENST00000604494 112 ntBASIC3.24□□□□□ -1.89
SCAF1Q9H7N4 MIR583-201ENST00000384846 75 ntBASIC3.23□□□□□ -1.89
SCAF1Q9H7N4 MIR30A-201ENST00000385092 71 ntBASIC3.23□□□□□ -1.89
SCAF1Q9H7N4 MIR5007-201ENST00000583098 95 ntBASIC3.23□□□□□ -1.89
SCAF1Q9H7N4 MIR219B-201ENST00000637023 88 ntBASIC3.23□□□□□ -1.89
SCAF1Q9H7N4 RNU6-822P-201ENST00000362707 106 ntBASIC3.22□□□□□ -1.89
SCAF1Q9H7N4 MIR221-201ENST00000385135 110 ntBASIC3.22□□□□□ -1.89
SCAF1Q9H7N4 RNU7-151P-201ENST00000516930 53 ntBASIC3.22□□□□□ -1.89
SCAF1Q9H7N4 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC3.22□□□□□ -1.89
SCAF1Q9H7N4 MIR4299-201ENST00000577899 72 ntBASIC3.22□□□□□ -1.89
SCAF1Q9H7N4 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
SCAF1Q9H7N4 MIRLET7G-201ENST00000362280 84 ntBASIC3.21□□□□□ -1.89
SCAF1Q9H7N4 Y_RNA.69-201ENST00000362885 109 ntBASIC3.21□□□□□ -1.89
SCAF1Q9H7N4 RNU6-458P-201ENST00000384179 107 ntBASIC3.21□□□□□ -1.89
SCAF1Q9H7N4 U7.7-201ENST00000459276 60 ntBASIC3.21□□□□□ -1.89
SCAF1Q9H7N4 SNORA44.1-201ENST00000517031 108 ntBASIC3.21□□□□□ -1.89
SCAF1Q9H7N4 U6.58-201ENST00000613107 107 ntBASIC3.21□□□□□ -1.89
SCAF1Q9H7N4 AL162376.1-201ENST00000624117 175 ntBASIC3.21□□□□□ -1.89
SCAF1Q9H7N4 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
SCAF1Q9H7N4 RNU6-1204P-201ENST00000363948 107 ntBASIC3.2□□□□□ -1.9
SCAF1Q9H7N4 Y_RNA.540-201ENST00000384638 111 ntBASIC3.2□□□□□ -1.9
SCAF1Q9H7N4 MIR3678-201ENST00000578455 94 ntBASIC3.2□□□□□ -1.9
SCAF1Q9H7N4 MIR429-201ENST00000362106 83 ntBASIC3.19□□□□□ -1.9
SCAF1Q9H7N4 RNU1-92P-201ENST00000517017 135 ntBASIC3.19□□□□□ -1.9
SCAF1Q9H7N4 MIR5002-201ENST00000584713 97 ntBASIC3.19□□□□□ -1.9
SCAF1Q9H7N4 uc_338.20-201ENST00000621563 178 ntBASIC3.19□□□□□ -1.9
SCAF1Q9H7N4 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
SCAF1Q9H7N4 RNA5SP160-201ENST00000364866 120 ntBASIC3.18□□□□□ -1.9
SCAF1Q9H7N4 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC3.18□□□□□ -1.9
SCAF1Q9H7N4 RNU7-160P-201ENST00000516660 62 ntBASIC3.18□□□□□ -1.9
SCAF1Q9H7N4 RNU6-1008P-201ENST00000384160 104 ntBASIC3.17□□□□□ -1.9
SCAF1Q9H7N4 MIR329-2-201ENST00000385029 84 ntBASIC3.17□□□□□ -1.9
SCAF1Q9H7N4 RNU6-721P-201ENST00000410155 105 ntBASIC3.17□□□□□ -1.9
SCAF1Q9H7N4 AC006210.1-201ENST00000424882 111 ntBASIC3.17□□□□□ -1.9
SCAF1Q9H7N4 SCARNA16.5-201ENST00000517114 183 ntBASIC3.17□□□□□ -1.9
SCAF1Q9H7N4 U2.18-201ENST00000622185 84 ntBASIC3.17□□□□□ -1.9
SCAF1Q9H7N4 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
SCAF1Q9H7N4 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
SCAF1Q9H7N4 RNU6ATAC9P-201ENST00000516210 116 ntBASIC3.16□□□□□ -1.9
SCAF1Q9H7N4 AC138207.3-201ENST00000585289 166 ntBASIC3.16□□□□□ -1.9
SCAF1Q9H7N4 RNA5SP37-201ENST00000365420 130 ntBASIC3.15□□□□□ -1.91
SCAF1Q9H7N4 SNORD110-201ENST00000408189 75 ntBASIC3.15□□□□□ -1.91
SCAF1Q9H7N4 MIR6779-201ENST00000617283 64 ntBASIC3.15□□□□□ -1.91
SCAF1Q9H7N4 RNU6-598P-201ENST00000364017 105 ntBASIC3.14□□□□□ -1.91
SCAF1Q9H7N4 BX248123.2-201ENST00000606318 124 ntBASIC3.14□□□□□ -1.91
SCAF1Q9H7N4 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
SCAF1Q9H7N4 SNORD115-25-201ENST00000362619 82 ntBASIC3.13□□□□□ -1.91
SCAF1Q9H7N4 RNA5SP94-201ENST00000516917 108 ntBASIC3.13□□□□□ -1.91
SCAF1Q9H7N4 SNORD89-201ENST00000390981 114 ntBASIC3.12□□□□□ -1.91
SCAF1Q9H7N4 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
SCAF1Q9H7N4 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
SCAF1Q9H7N4 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
SCAF1Q9H7N4 RNU6-42P-201ENST00000384165 107 ntBASIC3.1□□□□□ -1.91
SCAF1Q9H7N4 RNA5SP364-201ENST00000516938 78 ntBASIC3.1□□□□□ -1.91
SCAF1Q9H7N4 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC3.1□□□□□ -1.91
SCAF1Q9H7N4 MIR6734-201ENST00000621166 68 ntBASIC3.1□□□□□ -1.91
SCAF1Q9H7N4 MIR6766-201ENST00000622641 72 ntBASIC3.1□□□□□ -1.91
SCAF1Q9H7N4 AL451105.1-201ENST00000450005 189 ntBASIC3.09□□□□□ -1.91
SCAF1Q9H7N4 RNU7-154P-201ENST00000516194 62 ntBASIC3.09□□□□□ -1.91
SCAF1Q9H7N4 RNU6-742P-201ENST00000365289 107 ntBASIC3.08□□□□□ -1.92
SCAF1Q9H7N4 SNORA48.3-201ENST00000391081 134 ntBASIC3.08□□□□□ -1.92
SCAF1Q9H7N4 RNU6-337P-201ENST00000391243 106 ntBASIC3.08□□□□□ -1.92
SCAF1Q9H7N4 SNORD13-201ENST00000459299 104 ntBASIC3.08□□□□□ -1.92
SCAF1Q9H7N4 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
SCAF1Q9H7N4 SNORA70.22-201ENST00000517160 124 ntBASIC3.07□□□□□ -1.92
SCAF1Q9H7N4 Y_RNA.374-201ENST00000365606 101 ntBASIC3.06□□□□□ -1.92
SCAF1Q9H7N4 RNU4-62P-201ENST00000410125 130 ntBASIC3.06□□□□□ -1.92
SCAF1Q9H7N4 AP1B1P2-201ENST00000416196 106 ntBASIC3.06□□□□□ -1.92
SCAF1Q9H7N4 RNA5SP190-201ENST00000365222 118 ntBASIC3.05□□□□□ -1.92
SCAF1Q9H7N4 SNORD105-201ENST00000386910 85 ntBASIC3.05□□□□□ -1.92
SCAF1Q9H7N4 RNA5SP227-201ENST00000516184 113 ntBASIC3.05□□□□□ -1.92
SCAF1Q9H7N4 RNU6-894P-201ENST00000517094 105 ntBASIC3.05□□□□□ -1.92
SCAF1Q9H7N4 RNA5SP200-201ENST00000516360 103 ntBASIC3.04□□□□□ -1.92
SCAF1Q9H7N4 RNU6ATAC38P-201ENST00000408119 126 ntBASIC3.03□□□□□ -1.92
SCAF1Q9H7N4 AC025627.3-201ENST00000582078 182 ntBASIC3.03□□□□□ -1.92
SCAF1Q9H7N4 MIR6132-201ENST00000622083 109 ntBASIC3.03□□□□□ -1.92
SCAF1Q9H7N4 RNU6-828P-201ENST00000364876 107 ntBASIC3.02□□□□□ -1.93
SCAF1Q9H7N4 RNU1-78P-201ENST00000391248 165 ntBASIC3.02□□□□□ -1.93
SCAF1Q9H7N4 MIR3612-201ENST00000579753 87 ntBASIC3.02□□□□□ -1.93
SCAF1Q9H7N4 RNU6-945P-201ENST00000383947 107 ntBASIC3.01□□□□□ -1.93
SCAF1Q9H7N4 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC3.01□□□□□ -1.93
SCAF1Q9H7N4 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
SCAF1Q9H7N4 MIR6504-201ENST00000613520 61 ntBASIC2.99□□□□□ -1.93
SCAF1Q9H7N4 MIR6828-201ENST00000636181 60 ntBASIC2.99□□□□□ -1.93
SCAF1Q9H7N4 SNORD114-26-201ENST00000363543 72 ntBASIC2.98□□□□□ -1.93
SCAF1Q9H7N4 MIR1276-201ENST00000408707 83 ntBASIC2.98□□□□□ -1.93
SCAF1Q9H7N4 AC002429.1-201ENST00000437672 148 ntBASIC2.98□□□□□ -1.93
SCAF1Q9H7N4 MIR6773-201ENST00000612812 74 ntBASIC2.98□□□□□ -1.93
SCAF1Q9H7N4 RNU6-995P-201ENST00000391244 107 ntBASIC2.97□□□□□ -1.93
SCAF1Q9H7N4 RNA5SP220-201ENST00000516298 104 ntBASIC2.97□□□□□ -1.93
SCAF1Q9H7N4 AC244090.1-201ENST00000441884 93 ntBASIC2.96□□□□□ -1.93
SCAF1Q9H7N4 RNU6-1110P-201ENST00000516462 101 ntBASIC2.96□□□□□ -1.93
SCAF1Q9H7N4 RNA5SP470-201ENST00000516463 106 ntBASIC2.96□□□□□ -1.93
SCAF1Q9H7N4 SNORA25.15-201ENST00000516487 89 ntBASIC2.96□□□□□ -1.93
SCAF1Q9H7N4 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC2.96□□□□□ -1.94
SCAF1Q9H7N4 MIR20A-201ENST00000362279 71 ntBASIC2.95□□□□□ -1.94
SCAF1Q9H7N4 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC2.95□□□□□ -1.94
SCAF1Q9H7N4 Y_RNA.783-201ENST00000613546 102 ntBASIC2.95□□□□□ -1.94
SCAF1Q9H7N4 SNORA70.25-201ENST00000612741 95 ntBASIC2.94□□□□□ -1.94
SCAF1Q9H7N4 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC2.94□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 193.5 ms