Protein–RNA interactions for Protein: Q9H2S5

RNF39, RING finger protein 39, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39Q9H2S5 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
RNF39Q9H2S5 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC2.7□□□□□ -1.98
RNF39Q9H2S5 RNA5SP385-201ENST00000515947 110 ntBASIC2.7□□□□□ -1.98
RNF39Q9H2S5 MIR3612-201ENST00000579753 87 ntBASIC2.7□□□□□ -1.98
RNF39Q9H2S5 MIR7843-201ENST00000622274 79 ntBASIC2.7□□□□□ -1.98
RNF39Q9H2S5 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
RNF39Q9H2S5 RNA5SP24-201ENST00000516478 95 ntBASIC2.69□□□□□ -1.98
RNF39Q9H2S5 SNORA3.2-201ENST00000408221 125 ntBASIC2.68□□□□□ -1.98
RNF39Q9H2S5 RNA5SP268-201ENST00000516828 124 ntBASIC2.68□□□□□ -1.98
RNF39Q9H2S5 RNU7-188P-201ENST00000517063 64 ntBASIC2.68□□□□□ -1.98
RNF39Q9H2S5 MIR4506-201ENST00000584693 77 ntBASIC2.68□□□□□ -1.98
RNF39Q9H2S5 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.68□□□□□ -1.98
RNF39Q9H2S5 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
RNF39Q9H2S5 MIR504-201ENST00000385065 83 ntBASIC2.67□□□□□ -1.98
RNF39Q9H2S5 SNORD88.1-201ENST00000408684 91 ntBASIC2.67□□□□□ -1.98
RNF39Q9H2S5 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC2.67□□□□□ -1.98
RNF39Q9H2S5 RNA5SP67-201ENST00000516422 131 ntBASIC2.67□□□□□ -1.98
RNF39Q9H2S5 RNA5SP169-201ENST00000517268 117 ntBASIC2.67□□□□□ -1.98
RNF39Q9H2S5 AC046143.2-201ENST00000609789 160 ntBASIC2.67□□□□□ -1.98
RNF39Q9H2S5 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.67□□□□□ -1.98
RNF39Q9H2S5 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
RNF39Q9H2S5 RNA5SP456-201ENST00000364002 114 ntBASIC2.66□□□□□ -1.98
RNF39Q9H2S5 RNU1-52P-201ENST00000384190 164 ntBASIC2.66□□□□□ -1.98
RNF39Q9H2S5 RNU1-40P-201ENST00000516816 164 ntBASIC2.66□□□□□ -1.98
RNF39Q9H2S5 RNU1-97P-201ENST00000516872 164 ntBASIC2.66□□□□□ -1.98
RNF39Q9H2S5 MIR4524B-201ENST00000581569 115 ntBASIC2.66□□□□□ -1.98
RNF39Q9H2S5 MIR6888-201ENST00000621977 67 ntBASIC2.66□□□□□ -1.98
RNF39Q9H2S5 snoR1.1-201ENST00000628177 80 ntBASIC2.66□□□□□ -1.98
RNF39Q9H2S5 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.98
RNF39Q9H2S5 RNU6-1036P-201ENST00000383959 104 ntBASIC2.65□□□□□ -1.99
RNF39Q9H2S5 RNU6-175P-201ENST00000516896 107 ntBASIC2.65□□□□□ -1.99
RNF39Q9H2S5 Y_RNA.382-201ENST00000365672 114 ntBASIC2.64□□□□□ -1.99
RNF39Q9H2S5 MIR573-201ENST00000384964 99 ntBASIC2.64□□□□□ -1.99
RNF39Q9H2S5 MIR30A-201ENST00000385092 71 ntBASIC2.64□□□□□ -1.99
RNF39Q9H2S5 RNU4-53P-201ENST00000410828 140 ntBASIC2.64□□□□□ -1.99
RNF39Q9H2S5 MIR548Q-201ENST00000408404 100 ntBASIC2.63□□□□□ -1.99
RNF39Q9H2S5 AC026436.1-201ENST00000510537 270 ntBASIC2.63□□□□□ -1.99
RNF39Q9H2S5 MIR4769-201ENST00000584126 77 ntBASIC2.63□□□□□ -1.99
RNF39Q9H2S5 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
RNF39Q9H2S5 SNORA36.1-201ENST00000363424 132 ntBASIC2.62□□□□□ -1.99
RNF39Q9H2S5 MIR520D-201ENST00000385002 87 ntBASIC2.62□□□□□ -1.99
RNF39Q9H2S5 Y_RNA.613-201ENST00000410726 97 ntBASIC2.62□□□□□ -1.99
RNF39Q9H2S5 MIR4752-201ENST00000579672 72 ntBASIC2.62□□□□□ -1.99
RNF39Q9H2S5 MIR5092-201ENST00000583139 88 ntBASIC2.62□□□□□ -1.99
RNF39Q9H2S5 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
RNF39Q9H2S5 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.62□□□□□ -1.99
RNF39Q9H2S5 RNU6-56P-201ENST00000516986 93 ntBASIC2.61□□□□□ -1.99
RNF39Q9H2S5 MIR5706-201ENST00000579841 80 ntBASIC2.61□□□□□ -1.99
RNF39Q9H2S5 MIR7107-201ENST00000611489 80 ntBASIC2.61□□□□□ -1.99
RNF39Q9H2S5 AL445584.3-201ENST00000617173 78 ntBASIC2.61□□□□□ -1.99
RNF39Q9H2S5 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
RNF39Q9H2S5 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
RNF39Q9H2S5 MIR4464-201ENST00000580818 92 ntBASIC2.6□□□□□ -1.99
RNF39Q9H2S5 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
RNF39Q9H2S5 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.59□□□□□ -1.99
RNF39Q9H2S5 RNY3P8-201ENST00000411366 126 ntBASIC2.59□□□□□ -1.99
RNF39Q9H2S5 SNORA70.22-201ENST00000517160 124 ntBASIC2.59□□□□□ -1.99
RNF39Q9H2S5 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.59□□□□□ -1.99
RNF39Q9H2S5 MIR1291-201ENST00000627649 87 ntBASIC2.59□□□□□ -1.99
RNF39Q9H2S5 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
RNF39Q9H2S5 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.58□□□□□ -2
RNF39Q9H2S5 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.58□□□□□ -2
RNF39Q9H2S5 snoU13.15-201ENST00000459407 104 ntBASIC2.58□□□□□ -2
RNF39Q9H2S5 MIR6733-201ENST00000635723 61 ntBASIC2.58□□□□□ -2
RNF39Q9H2S5 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.57□□□□□ -2
RNF39Q9H2S5 SNORD12-201ENST00000391002 90 ntBASIC2.57□□□□□ -2
RNF39Q9H2S5 RNU6-732P-201ENST00000516033 103 ntBASIC2.57□□□□□ -2
RNF39Q9H2S5 SNORD23.1-201ENST00000408212 104 ntBASIC2.56□□□□□ -2
RNF39Q9H2S5 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
RNF39Q9H2S5 MIR21-201ENST00000362134 72 ntBASIC2.55□□□□□ -2
RNF39Q9H2S5 U8.9-201ENST00000365667 134 ntBASIC2.55□□□□□ -2
RNF39Q9H2S5 RN7SKP223-201ENST00000410582 62 ntBASIC2.55□□□□□ -2
RNF39Q9H2S5 AC008834.1-201ENST00000511612 175 ntBASIC2.55□□□□□ -2
RNF39Q9H2S5 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.54□□□□□ -2
RNF39Q9H2S5 RNA5SP425-201ENST00000410336 112 ntBASIC2.53□□□□□ -2
RNF39Q9H2S5 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2.01
RNF39Q9H2S5 SNORA62.4-201ENST00000365504 151 ntBASIC2.52□□□□□ -2.01
RNF39Q9H2S5 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
RNF39Q9H2S5 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
RNF39Q9H2S5 AC002429.1-201ENST00000437672 148 ntBASIC2.5□□□□□ -2.01
RNF39Q9H2S5 RN7SL499P-201ENST00000481141 276 ntBASIC2.5□□□□□ -2.01
RNF39Q9H2S5 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC2.5□□□□□ -2.01
RNF39Q9H2S5 MIR4648-201ENST00000580107 72 ntBASIC2.5□□□□□ -2.01
RNF39Q9H2S5 MIR5007-201ENST00000583098 95 ntBASIC2.5□□□□□ -2.01
RNF39Q9H2S5 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
RNF39Q9H2S5 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.49□□□□□ -2.01
RNF39Q9H2S5 SNORD60-201ENST00000383903 83 ntBASIC2.49□□□□□ -2.01
RNF39Q9H2S5 AL356320.1-201ENST00000429616 163 ntBASIC2.49□□□□□ -2.01
RNF39Q9H2S5 FABP5P4-201ENST00000437203 171 ntBASIC2.49□□□□□ -2.01
RNF39Q9H2S5 snoU13.23-201ENST00000458863 104 ntBASIC2.49□□□□□ -2.01
RNF39Q9H2S5 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.48□□□□□ -2.01
RNF39Q9H2S5 Y_RNA.406-201ENST00000383984 100 ntBASIC2.48□□□□□ -2.01
RNF39Q9H2S5 MIR1273D-201ENST00000577266 86 ntBASIC2.48□□□□□ -2.01
RNF39Q9H2S5 MIR4299-201ENST00000577899 72 ntBASIC2.48□□□□□ -2.01
RNF39Q9H2S5 RNU6-836P-201ENST00000362920 107 ntBASIC2.47□□□□□ -2.01
RNF39Q9H2S5 MIR643-201ENST00000385267 97 ntBASIC2.47□□□□□ -2.01
RNF39Q9H2S5 AP000676.1-201ENST00000533307 52 ntBASIC2.47□□□□□ -2.01
RNF39Q9H2S5 U7.6-201ENST00000610841 64 ntBASIC2.47□□□□□ -2.01
RNF39Q9H2S5 AC245884.12-201ENST00000615364 59 ntBASIC2.47□□□□□ -2.01
RNF39Q9H2S5 SNORA25-201ENST00000384384 134 ntBASIC2.46□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 108.9 ms