Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 AL159169.1-201ENST00000421119 127 ntBASIC0.71□□□□□ -2.3
KRTAP4-3Q9BYR4 MICF-203ENST00000432679 129 ntBASIC0.71□□□□□ -2.3
KRTAP4-3Q9BYR4 JTBP1-201ENST00000441314 247 ntBASIC0.71□□□□□ -2.3
KRTAP4-3Q9BYR4 AC244090.1-201ENST00000441884 93 ntBASIC0.71□□□□□ -2.3
KRTAP4-3Q9BYR4 AL591623.2-201ENST00000449978 222 ntBASIC0.71□□□□□ -2.3
KRTAP4-3Q9BYR4 RN7SL499P-201ENST00000481141 276 ntBASIC0.71□□□□□ -2.3
KRTAP4-3Q9BYR4 DEFB122-202ENST00000569013 197 ntBASIC0.71□□□□□ -2.3
KRTAP4-3Q9BYR4 MIR5693-201ENST00000577722 73 ntBASIC0.71□□□□□ -2.3
KRTAP4-3Q9BYR4 AL136317.1-201ENST00000612653 226 ntBASIC0.71□□□□□ -2.3
KRTAP4-3Q9BYR4 AL773524.1-201ENST00000614065 229 ntBASIC0.71□□□□□ -2.3
KRTAP4-3Q9BYR4 AC244669.1-204ENST00000621564 178 ntBASIC0.71□□□□□ -2.3
KRTAP4-3Q9BYR4 MIR6888-201ENST00000621977 67 ntBASIC0.71□□□□□ -2.3
KRTAP4-3Q9BYR4 AC027335.2-201ENST00000624030 375 ntBASIC0.71□□□□□ -2.3
KRTAP4-3Q9BYR4 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC0.71□□□□□ -2.3
KRTAP4-3Q9BYR4 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC0.71□□□□□ -2.3
KRTAP4-3Q9BYR4 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC0.7□□□□□ -2.3
KRTAP4-3Q9BYR4 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC0.7□□□□□ -2.3
KRTAP4-3Q9BYR4 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC0.7□□□□□ -2.3
KRTAP4-3Q9BYR4 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC0.7□□□□□ -2.3
KRTAP4-3Q9BYR4 RNU6-50P-201ENST00000362356 103 ntBASIC0.7□□□□□ -2.3
KRTAP4-3Q9BYR4 RNU6-502P-201ENST00000362419 108 ntBASIC0.7□□□□□ -2.3
KRTAP4-3Q9BYR4 Y_RNA.137-201ENST00000363455 112 ntBASIC0.7□□□□□ -2.3
KRTAP4-3Q9BYR4 RNU6-10P-201ENST00000384036 107 ntBASIC0.7□□□□□ -2.3
KRTAP4-3Q9BYR4 MIR520A-201ENST00000384862 85 ntBASIC0.7□□□□□ -2.3
KRTAP4-3Q9BYR4 MIR3074-201ENST00000384885 81 ntBASIC0.7□□□□□ -2.3
KRTAP4-3Q9BYR4 MIR509-1-201ENST00000385265 94 ntBASIC0.7□□□□□ -2.3
KRTAP4-3Q9BYR4 MIR509-2-201ENST00000390724 91 ntBASIC0.7□□□□□ -2.3
KRTAP4-3Q9BYR4 RNU6-360P-201ENST00000390944 104 ntBASIC0.7□□□□□ -2.3
KRTAP4-3Q9BYR4 RNA5SP338-201ENST00000410495 85 ntBASIC0.7□□□□□ -2.3
KRTAP4-3Q9BYR4 RNA5SP344-201ENST00000411081 104 ntBASIC0.7□□□□□ -2.3
KRTAP4-3Q9BYR4 RPL35AP4-201ENST00000412007 102 ntBASIC0.7□□□□□ -2.3
KRTAP4-3Q9BYR4 RNU7-26P-201ENST00000458980 63 ntBASIC0.7□□□□□ -2.3
KRTAP4-3Q9BYR4 SNORD2-201ENST00000459163 69 ntBASIC0.7□□□□□ -2.3
KRTAP4-3Q9BYR4 MIR4458-201ENST00000578872 75 ntBASIC0.7□□□□□ -2.3
KRTAP4-3Q9BYR4 MIR3664-201ENST00000579074 99 ntBASIC0.7□□□□□ -2.3
KRTAP4-3Q9BYR4 AL731768.1-201ENST00000603124 139 ntBASIC0.7□□□□□ -2.3
KRTAP4-3Q9BYR4 MIR6845-201ENST00000613182 61 ntBASIC0.7□□□□□ -2.3
KRTAP4-3Q9BYR4 AL445584.3-201ENST00000617173 78 ntBASIC0.7□□□□□ -2.3
KRTAP4-3Q9BYR4 MIR6076-201ENST00000617521 113 ntBASIC0.7□□□□□ -2.3
KRTAP4-3Q9BYR4 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC0.7□□□□□ -2.3
KRTAP4-3Q9BYR4 MIR7157-201ENST00000635801 60 ntBASIC0.7□□□□□ -2.3
KRTAP4-3Q9BYR4 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.7□□□□□ -2.3
KRTAP4-3Q9BYR4 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC0.7□□□□□ -2.3
KRTAP4-3Q9BYR4 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.7□□□□□ -2.3
KRTAP4-3Q9BYR4 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC0.7□□□□□ -2.3
KRTAP4-3Q9BYR4 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC0.7□□□□□ -2.3
KRTAP4-3Q9BYR4 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC0.69□□□□□ -2.3
KRTAP4-3Q9BYR4 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC0.69□□□□□ -2.3
KRTAP4-3Q9BYR4 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC0.69□□□□□ -2.3
KRTAP4-3Q9BYR4 MIR20A-201ENST00000362279 71 ntBASIC0.69□□□□□ -2.3
KRTAP4-3Q9BYR4 Y_RNA.55-201ENST00000362797 102 ntBASIC0.69□□□□□ -2.3
KRTAP4-3Q9BYR4 RNU1-17P-201ENST00000363022 152 ntBASIC0.69□□□□□ -2.3
KRTAP4-3Q9BYR4 SNORD113-3-201ENST00000364830 72 ntBASIC0.69□□□□□ -2.3
KRTAP4-3Q9BYR4 Y_RNA.338-201ENST00000365320 114 ntBASIC0.69□□□□□ -2.3
KRTAP4-3Q9BYR4 Y_RNA.421-201ENST00000384052 101 ntBASIC0.69□□□□□ -2.3
KRTAP4-3Q9BYR4 RNU6-1044P-201ENST00000384755 107 ntBASIC0.69□□□□□ -2.3
KRTAP4-3Q9BYR4 MIR767-201ENST00000390228 109 ntBASIC0.69□□□□□ -2.3
KRTAP4-3Q9BYR4 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC0.69□□□□□ -2.3
KRTAP4-3Q9BYR4 RNU6-127P-201ENST00000390897 107 ntBASIC0.69□□□□□ -2.3
KRTAP4-3Q9BYR4 MIR938-201ENST00000401216 83 ntBASIC0.69□□□□□ -2.3
KRTAP4-3Q9BYR4 AC006210.1-201ENST00000424882 111 ntBASIC0.69□□□□□ -2.3
KRTAP4-3Q9BYR4 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC0.69□□□□□ -2.3
KRTAP4-3Q9BYR4 RNU6-848P-201ENST00000515948 107 ntBASIC0.69□□□□□ -2.3
KRTAP4-3Q9BYR4 RNU6-617P-201ENST00000516147 107 ntBASIC0.69□□□□□ -2.3
KRTAP4-3Q9BYR4 RNU6-473P-201ENST00000516164 107 ntBASIC0.69□□□□□ -2.3
KRTAP4-3Q9BYR4 RNA5SP458-201ENST00000516188 119 ntBASIC0.69□□□□□ -2.3
KRTAP4-3Q9BYR4 RNU6-922P-201ENST00000516753 99 ntBASIC0.69□□□□□ -2.3
KRTAP4-3Q9BYR4 RNA5SP481-201ENST00000516814 122 ntBASIC0.69□□□□□ -2.3
KRTAP4-3Q9BYR4 RNU6-345P-201ENST00000517001 107 ntBASIC0.69□□□□□ -2.3
KRTAP4-3Q9BYR4 SCARNA11.3-201ENST00000517276 130 ntBASIC0.69□□□□□ -2.3
KRTAP4-3Q9BYR4 MIR3199-1-201ENST00000582434 88 ntBASIC0.69□□□□□ -2.3
KRTAP4-3Q9BYR4 MIR4639-201ENST00000584938 69 ntBASIC0.69□□□□□ -2.3
KRTAP4-3Q9BYR4 AL162376.1-201ENST00000624117 175 ntBASIC0.69□□□□□ -2.3
KRTAP4-3Q9BYR4 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC0.69□□□□□ -2.3
KRTAP4-3Q9BYR4 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC0.68□□□□□ -2.3
KRTAP4-3Q9BYR4 MIR6073-201ENST00000352083 89 ntBASIC0.68□□□□□ -2.3
KRTAP4-3Q9BYR4 MIRLET7A3-201ENST00000362116 74 ntBASIC0.68□□□□□ -2.3
KRTAP4-3Q9BYR4 RNU6-79P-201ENST00000362511 107 ntBASIC0.68□□□□□ -2.3
KRTAP4-3Q9BYR4 RNU6-716P-201ENST00000365621 103 ntBASIC0.68□□□□□ -2.3
KRTAP4-3Q9BYR4 RNU6-1133P-201ENST00000410963 100 ntBASIC0.68□□□□□ -2.3
KRTAP4-3Q9BYR4 AC104435.1-201ENST00000483483 166 ntBASIC0.68□□□□□ -2.3
KRTAP4-3Q9BYR4 RNU7-40P-201ENST00000516397 64 ntBASIC0.68□□□□□ -2.3
KRTAP4-3Q9BYR4 MIR3670-2-201ENST00000582974 65 ntBASIC0.68□□□□□ -2.3
KRTAP4-3Q9BYR4 MIR3670-1-201ENST00000584160 65 ntBASIC0.68□□□□□ -2.3
KRTAP4-3Q9BYR4 MIR3670-3-201ENST00000584855 65 ntBASIC0.68□□□□□ -2.3
KRTAP4-3Q9BYR4 MIR3670-4-201ENST00000612260 65 ntBASIC0.68□□□□□ -2.3
KRTAP4-3Q9BYR4 U6.97-201ENST00000636904 101 ntBASIC0.68□□□□□ -2.3
KRTAP4-3Q9BYR4 MIR219B-201ENST00000637023 88 ntBASIC0.68□□□□□ -2.3
KRTAP4-3Q9BYR4 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC0.68□□□□□ -2.3
KRTAP4-3Q9BYR4 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC0.67□□□□□ -2.3
KRTAP4-3Q9BYR4 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.67□□□□□ -2.3
KRTAP4-3Q9BYR4 SNORD18C-201ENST00000362704 69 ntBASIC0.67□□□□□ -2.3
KRTAP4-3Q9BYR4 RNU1-93P-201ENST00000364704 169 ntBASIC0.67□□□□□ -2.3
KRTAP4-3Q9BYR4 Y_RNA.403-201ENST00000383977 101 ntBASIC0.67□□□□□ -2.3
KRTAP4-3Q9BYR4 Y_RNA.540-201ENST00000384638 111 ntBASIC0.67□□□□□ -2.3
KRTAP4-3Q9BYR4 MIR9-3-201ENST00000385084 90 ntBASIC0.67□□□□□ -2.3
KRTAP4-3Q9BYR4 MIR607-201ENST00000385241 96 ntBASIC0.67□□□□□ -2.3
KRTAP4-3Q9BYR4 Y_RNA.612-201ENST00000410717 95 ntBASIC0.67□□□□□ -2.3
KRTAP4-3Q9BYR4 RNA5SP200-201ENST00000516360 103 ntBASIC0.67□□□□□ -2.3
KRTAP4-3Q9BYR4 RNU6-135P-201ENST00000516769 101 ntBASIC0.67□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 134 ms