Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC-0.26□□□□□ -2.45
SHROOM3Q8TF72 MIR4788-201ENST00000639104 80 ntBASIC-0.26□□□□□ -2.45
SHROOM3Q8TF72 RNU6-54P-201ENST00000365563 107 ntBASIC-0.26□□□□□ -2.45
SHROOM3Q8TF72 RNU6-901P-201ENST00000384593 106 ntBASIC-0.26□□□□□ -2.45
SHROOM3Q8TF72 RNU6-972P-201ENST00000391208 107 ntBASIC-0.26□□□□□ -2.45
SHROOM3Q8TF72 RNU6-795P-201ENST00000516323 103 ntBASIC-0.26□□□□□ -2.45
SHROOM3Q8TF72 MIR4432-201ENST00000581823 84 ntBASIC-0.26□□□□□ -2.45
SHROOM3Q8TF72 RNU5F-1-201ENST00000362507 117 ntBASIC-0.27□□□□□ -2.45
SHROOM3Q8TF72 RNU6-1325P-201ENST00000364905 105 ntBASIC-0.27□□□□□ -2.45
SHROOM3Q8TF72 SNORD58A-201ENST00000383875 65 ntBASIC-0.27□□□□□ -2.45
SHROOM3Q8TF72 SNORD116-21-201ENST00000384507 92 ntBASIC-0.27□□□□□ -2.45
SHROOM3Q8TF72 SNORD56B-201ENST00000384713 71 ntBASIC-0.27□□□□□ -2.45
SHROOM3Q8TF72 RNU6-554P-201ENST00000410466 106 ntBASIC-0.27□□□□□ -2.45
SHROOM3Q8TF72 RNU6-62P-201ENST00000516526 102 ntBASIC-0.27□□□□□ -2.45
SHROOM3Q8TF72 RNU6-762P-201ENST00000517107 102 ntBASIC-0.27□□□□□ -2.45
SHROOM3Q8TF72 AC103810.7-201ENST00000607821 91 ntBASIC-0.27□□□□□ -2.45
SHROOM3Q8TF72 Y_RNA.96-201ENST00000363092 109 ntBASIC-0.28□□□□□ -2.45
SHROOM3Q8TF72 RNU6-22P-201ENST00000384355 107 ntBASIC-0.28□□□□□ -2.45
SHROOM3Q8TF72 MIRLET7B-201ENST00000385140 83 ntBASIC-0.28□□□□□ -2.45
SHROOM3Q8TF72 RNU2-51P-201ENST00000410708 197 ntBASIC-0.28□□□□□ -2.45
SHROOM3Q8TF72 RNU4-63P-201ENST00000411313 118 ntBASIC-0.28□□□□□ -2.45
SHROOM3Q8TF72 Y_RNA.705-201ENST00000516862 110 ntBASIC-0.28□□□□□ -2.45
SHROOM3Q8TF72 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC-0.28□□□□□ -2.45
SHROOM3Q8TF72 MIR652-201ENST00000385278 98 ntBASIC-0.28□□□□□ -2.45
SHROOM3Q8TF72 RNU6-519P-201ENST00000410590 108 ntBASIC-0.28□□□□□ -2.45
SHROOM3Q8TF72 Y_RNA.677-201ENST00000516401 85 ntBASIC-0.28□□□□□ -2.45
SHROOM3Q8TF72 MIR148A-201ENST00000362215 68 ntBASIC-0.29□□□□□ -2.46
SHROOM3Q8TF72 RNU6-495P-201ENST00000362995 107 ntBASIC-0.29□□□□□ -2.46
SHROOM3Q8TF72 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-0.29□□□□□ -2.46
SHROOM3Q8TF72 RNU6-887P-201ENST00000410660 100 ntBASIC-0.29□□□□□ -2.46
SHROOM3Q8TF72 DLEU2_3.2-201ENST00000612883 73 ntBASIC-0.29□□□□□ -2.46
SHROOM3Q8TF72 RNU6-1154P-201ENST00000391001 104 ntBASIC-0.3□□□□□ -2.46
SHROOM3Q8TF72 SCARNA23-201ENST00000516060 130 ntBASIC-0.3□□□□□ -2.46
SHROOM3Q8TF72 RNU6-537P-201ENST00000517277 103 ntBASIC-0.3□□□□□ -2.46
SHROOM3Q8TF72 MIR548O2-201ENST00000616090 70 ntBASIC-0.3□□□□□ -2.46
SHROOM3Q8TF72 MIR198-201ENST00000637333 62 ntBASIC-0.3□□□□□ -2.46
SHROOM3Q8TF72 Y_RNA.107-201ENST00000363190 121 ntBASIC-0.3□□□□□ -2.46
SHROOM3Q8TF72 RNU6-476P-201ENST00000384726 107 ntBASIC-0.3□□□□□ -2.46
SHROOM3Q8TF72 AC244090.1-201ENST00000441884 93 ntBASIC-0.3□□□□□ -2.46
SHROOM3Q8TF72 Y_RNA.818-201ENST00000618813 71 ntBASIC-0.3□□□□□ -2.46
SHROOM3Q8TF72 uc_338.36-201ENST00000622331 158 ntBASIC-0.3□□□□□ -2.46
SHROOM3Q8TF72 RNU4-32P-201ENST00000363404 141 ntBASIC-0.31□□□□□ -2.46
SHROOM3Q8TF72 RNU6-106P-201ENST00000384405 107 ntBASIC-0.31□□□□□ -2.46
SHROOM3Q8TF72 MIR203A-201ENST00000384836 110 ntBASIC-0.31□□□□□ -2.46
SHROOM3Q8TF72 RNU6-1177P-201ENST00000391058 104 ntBASIC-0.31□□□□□ -2.46
SHROOM3Q8TF72 RNU7-24P-201ENST00000458867 62 ntBASIC-0.31□□□□□ -2.46
SHROOM3Q8TF72 MIR3910-1-201ENST00000580936 111 ntBASIC-0.31□□□□□ -2.46
SHROOM3Q8TF72 MIR3140-201ENST00000583685 90 ntBASIC-0.31□□□□□ -2.46
SHROOM3Q8TF72 Y_RNA.629-201ENST00000411368 105 ntBASIC-0.32□□□□□ -2.46
SHROOM3Q8TF72 AC096531.1-201ENST00000419107 107 ntBASIC-0.32□□□□□ -2.46
SHROOM3Q8TF72 snoU13.13-201ENST00000458842 104 ntBASIC-0.32□□□□□ -2.46
SHROOM3Q8TF72 MIR3064-201ENST00000581130 66 ntBASIC-0.32□□□□□ -2.46
SHROOM3Q8TF72 Y_RNA.190-201ENST00000363964 101 ntBASIC-0.32□□□□□ -2.46
SHROOM3Q8TF72 RNA5SP205-201ENST00000364653 136 ntBASIC-0.32□□□□□ -2.46
SHROOM3Q8TF72 RNU6-1051P-201ENST00000365471 102 ntBASIC-0.32□□□□□ -2.46
SHROOM3Q8TF72 SNORA19-201ENST00000384737 128 ntBASIC-0.32□□□□□ -2.46
SHROOM3Q8TF72 MIR9-2-201ENST00000384838 87 ntBASIC-0.32□□□□□ -2.46
SHROOM3Q8TF72 MIR590-201ENST00000385008 97 ntBASIC-0.32□□□□□ -2.46
SHROOM3Q8TF72 SNORD75.2-201ENST00000408784 58 ntBASIC-0.32□□□□□ -2.46
SHROOM3Q8TF72 snoU13.17-201ENST00000458802 104 ntBASIC-0.32□□□□□ -2.46
SHROOM3Q8TF72 RNU6-904P-201ENST00000516206 101 ntBASIC-0.32□□□□□ -2.46
SHROOM3Q8TF72 Y_RNA.371-201ENST00000365591 113 ntBASIC-0.33□□□□□ -2.46
SHROOM3Q8TF72 RNU6-813P-201ENST00000384691 107 ntBASIC-0.33□□□□□ -2.46
SHROOM3Q8TF72 U3.27-201ENST00000391237 200 ntBASIC-0.33□□□□□ -2.46
SHROOM3Q8TF72 SNORD126-201ENST00000459475 77 ntBASIC-0.33□□□□□ -2.46
SHROOM3Q8TF72 AC012531.4-201ENST00000616509 177 ntBASIC-0.33□□□□□ -2.46
SHROOM3Q8TF72 AC093726.3-201ENST00000637588 150 ntBASIC-0.33□□□□□ -2.46
SHROOM3Q8TF72 RNA5SP275-201ENST00000363936 118 ntBASIC-0.34□□□□□ -2.46
SHROOM3Q8TF72 RNU6-1056P-201ENST00000383996 107 ntBASIC-0.34□□□□□ -2.46
SHROOM3Q8TF72 TMSB4XP3-201ENST00000445144 114 ntBASIC-0.34□□□□□ -2.46
SHROOM3Q8TF72 RNU6-589P-201ENST00000516485 107 ntBASIC-0.34□□□□□ -2.46
SHROOM3Q8TF72 MIR6507-201ENST00000613630 70 ntBASIC-0.34□□□□□ -2.46
SHROOM3Q8TF72 MIR2052-201ENST00000636055 55 ntBASIC-0.34□□□□□ -2.46
SHROOM3Q8TF72 MIR450A1-201ENST00000362262 91 ntBASIC-0.34□□□□□ -2.46
SHROOM3Q8TF72 MIR582-201ENST00000365731 98 ntBASIC-0.34□□□□□ -2.46
SHROOM3Q8TF72 RNU6-905P-201ENST00000384434 107 ntBASIC-0.34□□□□□ -2.46
SHROOM3Q8TF72 RNU6-1117P-201ENST00000384525 104 ntBASIC-0.34□□□□□ -2.46
SHROOM3Q8TF72 RNU6-644P-201ENST00000391155 98 ntBASIC-0.34□□□□□ -2.46
SHROOM3Q8TF72 AC114755.3-201ENST00000481111 251 ntBASIC-0.34□□□□□ -2.46
SHROOM3Q8TF72 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.34□□□□□ -2.46
SHROOM3Q8TF72 MIR4796-201ENST00000580742 81 ntBASIC-0.34□□□□□ -2.46
SHROOM3Q8TF72 AL590491.3-201ENST00000610731 82 ntBASIC-0.34□□□□□ -2.46
SHROOM3Q8TF72 Y_RNA.348-201ENST00000365403 103 ntBASIC-0.35□□□□□ -2.47
SHROOM3Q8TF72 MIR196A2-201ENST00000385189 110 ntBASIC-0.35□□□□□ -2.47
SHROOM3Q8TF72 SNORD42B-201ENST00000458893 67 ntBASIC-0.35□□□□□ -2.47
SHROOM3Q8TF72 FGF7P7-201ENST00000514120 227 ntBASIC-0.35□□□□□ -2.47
SHROOM3Q8TF72 MIR548Z-201ENST00000584743 97 ntBASIC-0.35□□□□□ -2.47
SHROOM3Q8TF72 MIR6509-201ENST00000614603 85 ntBASIC-0.35□□□□□ -2.47
SHROOM3Q8TF72 MIR6854-201ENST00000614935 69 ntBASIC-0.35□□□□□ -2.47
SHROOM3Q8TF72 RNU6-502P-201ENST00000362419 108 ntBASIC-0.36□□□□□ -2.47
SHROOM3Q8TF72 SNORD115-37-201ENST00000363768 82 ntBASIC-0.36□□□□□ -2.47
SHROOM3Q8TF72 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-0.36□□□□□ -2.47
SHROOM3Q8TF72 Y_RNA.709-201ENST00000516952 92 ntBASIC-0.36□□□□□ -2.47
SHROOM3Q8TF72 AL365222.1-201ENST00000614661 98 ntBASIC-0.36□□□□□ -2.47
SHROOM3Q8TF72 U7.3-201ENST00000616123 62 ntBASIC-0.36□□□□□ -2.47
SHROOM3Q8TF72 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.36□□□□□ -2.47
SHROOM3Q8TF72 RNU6-1014P-201ENST00000383940 103 ntBASIC-0.36□□□□□ -2.47
SHROOM3Q8TF72 MIR519C-201ENST00000385053 87 ntBASIC-0.36□□□□□ -2.47
SHROOM3Q8TF72 SNORD18.2-201ENST00000459604 70 ntBASIC-0.36□□□□□ -2.47
SHROOM3Q8TF72 SNORA18.5-201ENST00000516616 101 ntBASIC-0.36□□□□□ -2.47
Retrieved 100 of 98,524 protein–RNA pairs in 263.6 ms