Protein–RNA interactions for Protein: Q86UV5

USP48, Ubiquitin carboxyl-terminal hydrolase 48, humanhuman

Predictions only

Length 1,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP48Q86UV5 MIR548O2-201ENST00000616090 70 ntBASIC1.04□□□□□ -2.24
USP48Q86UV5 MIR1297-201ENST00000637311 77 ntBASIC1.04□□□□□ -2.24
USP48Q86UV5 RNU6-1187P-201ENST00000364771 110 ntBASIC1.03□□□□□ -2.24
USP48Q86UV5 SNORD115-31-201ENST00000365318 82 ntBASIC1.03□□□□□ -2.24
USP48Q86UV5 SNORA36.2-201ENST00000384004 127 ntBASIC1.03□□□□□ -2.24
USP48Q86UV5 MIR4773-1-201ENST00000637203 78 ntBASIC1.03□□□□□ -2.24
USP48Q86UV5 RNU6-382P-201ENST00000365181 106 ntBASIC1.02□□□□□ -2.25
USP48Q86UV5 RNU6-716P-201ENST00000365621 103 ntBASIC1.02□□□□□ -2.25
USP48Q86UV5 RNU6-788P-201ENST00000390967 104 ntBASIC1.02□□□□□ -2.25
USP48Q86UV5 RNU6-269P-201ENST00000391077 97 ntBASIC1.02□□□□□ -2.25
USP48Q86UV5 MIR4653-201ENST00000585107 83 ntBASIC1.02□□□□□ -2.25
USP48Q86UV5 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC1.02□□□□□ -2.25
USP48Q86UV5 RNU6-495P-201ENST00000362995 107 ntBASIC1.01□□□□□ -2.25
USP48Q86UV5 RNU6-1241P-201ENST00000384536 107 ntBASIC1.01□□□□□ -2.25
USP48Q86UV5 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC1.01□□□□□ -2.25
USP48Q86UV5 RNU6-587P-201ENST00000391282 106 ntBASIC1.01□□□□□ -2.25
USP48Q86UV5 RNY1P8-201ENST00000383970 114 ntBASIC1□□□□□ -2.25
USP48Q86UV5 RNU6-540P-201ENST00000384622 101 ntBASIC1□□□□□ -2.25
USP48Q86UV5 MIR140-201ENST00000385282 100 ntBASIC1□□□□□ -2.25
USP48Q86UV5 RPL39P28-201ENST00000465655 155 ntBASIC1□□□□□ -2.25
USP48Q86UV5 RNA5SP94-201ENST00000516917 108 ntBASIC1□□□□□ -2.25
USP48Q86UV5 RNA5SP330-201ENST00000517096 96 ntBASIC1□□□□□ -2.25
USP48Q86UV5 AL162376.1-201ENST00000624117 175 ntBASIC1□□□□□ -2.25
USP48Q86UV5 SNORD114-23-201ENST00000363536 72 ntBASIC0.99□□□□□ -2.25
USP48Q86UV5 RNU6-54P-201ENST00000365563 107 ntBASIC0.99□□□□□ -2.25
USP48Q86UV5 MIR154-201ENST00000385243 84 ntBASIC0.99□□□□□ -2.25
USP48Q86UV5 SNORD42B-201ENST00000458893 67 ntBASIC0.99□□□□□ -2.25
USP48Q86UV5 NAMPTP3-201ENST00000569273 224 ntBASIC0.99□□□□□ -2.25
USP48Q86UV5 MIR3675-201ENST00000583661 73 ntBASIC0.99□□□□□ -2.25
USP48Q86UV5 SNORD45.1-201ENST00000363181 77 ntBASIC0.98□□□□□ -2.25
USP48Q86UV5 RNU1-141P-201ENST00000364623 158 ntBASIC0.98□□□□□ -2.25
USP48Q86UV5 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.98□□□□□ -2.25
USP48Q86UV5 RNU6-634P-201ENST00000459134 106 ntBASIC0.98□□□□□ -2.25
USP48Q86UV5 MIR924-201ENST00000638017 53 ntBASIC0.98□□□□□ -2.25
USP48Q86UV5 SNORD45A-201ENST00000384512 84 ntBASIC0.97□□□□□ -2.25
USP48Q86UV5 MIR203A-201ENST00000384836 110 ntBASIC0.97□□□□□ -2.25
USP48Q86UV5 SNORD30.1-201ENST00000391309 70 ntBASIC0.97□□□□□ -2.25
USP48Q86UV5 MIR548L-201ENST00000408303 86 ntBASIC0.97□□□□□ -2.25
USP48Q86UV5 RNU7-24P-201ENST00000458867 62 ntBASIC0.97□□□□□ -2.25
USP48Q86UV5 RNU6-351P-201ENST00000516097 100 ntBASIC0.97□□□□□ -2.25
USP48Q86UV5 MIR6835-201ENST00000621552 64 ntBASIC0.97□□□□□ -2.25
USP48Q86UV5 AC010487.4-201ENST00000637027 61 ntBASIC0.97□□□□□ -2.25
USP48Q86UV5 Y_RNA.68-201ENST00000362881 102 ntBASIC0.96□□□□□ -2.26
USP48Q86UV5 SNORD114-2-201ENST00000363953 78 ntBASIC0.96□□□□□ -2.26
USP48Q86UV5 SNORA8.2-201ENST00000384372 139 ntBASIC0.96□□□□□ -2.26
USP48Q86UV5 MIR508-201ENST00000384857 115 ntBASIC0.96□□□□□ -2.26
USP48Q86UV5 MT-TY-201ENST00000387409 66 ntBASIC0.96□□□□□ -2.26
USP48Q86UV5 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC0.96□□□□□ -2.26
USP48Q86UV5 RNA5SP268-201ENST00000516828 124 ntBASIC0.96□□□□□ -2.26
USP48Q86UV5 MIR7107-201ENST00000611489 80 ntBASIC0.96□□□□□ -2.26
USP48Q86UV5 RNU6-681P-201ENST00000364012 104 ntBASIC0.95□□□□□ -2.26
USP48Q86UV5 RNU6V-201ENST00000384105 107 ntBASIC0.95□□□□□ -2.26
USP48Q86UV5 RNU6-649P-201ENST00000384463 107 ntBASIC0.95□□□□□ -2.26
USP48Q86UV5 MIR216B-201ENST00000390186 82 ntBASIC0.95□□□□□ -2.26
USP48Q86UV5 SNORD75.2-201ENST00000408784 58 ntBASIC0.95□□□□□ -2.26
USP48Q86UV5 RNA5SP193-201ENST00000410353 107 ntBASIC0.95□□□□□ -2.26
USP48Q86UV5 RNA5SP484-201ENST00000458857 111 ntBASIC0.95□□□□□ -2.26
USP48Q86UV5 RNU7-74P-201ENST00000459104 62 ntBASIC0.95□□□□□ -2.26
USP48Q86UV5 RNU6-871P-201ENST00000516122 100 ntBASIC0.95□□□□□ -2.26
USP48Q86UV5 RNA5SP227-201ENST00000516184 113 ntBASIC0.94□□□□□ -2.26
USP48Q86UV5 AC018659.1-201ENST00000551083 169 ntBASIC0.94□□□□□ -2.26
USP48Q86UV5 AL109933.3-201ENST00000619095 188 ntBASIC0.94□□□□□ -2.26
USP48Q86UV5 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.93□□□□□ -2.26
USP48Q86UV5 SNORD115-22-201ENST00000364456 82 ntBASIC0.93□□□□□ -2.26
USP48Q86UV5 AL691482.2-201ENST00000457453 84 ntBASIC0.93□□□□□ -2.26
USP48Q86UV5 RNU6-539P-201ENST00000516665 103 ntBASIC0.93□□□□□ -2.26
USP48Q86UV5 AC092634.7-201ENST00000621022 103 ntBASIC0.93□□□□□ -2.26
USP48Q86UV5 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.92□□□□□ -2.26
USP48Q86UV5 RNA5SP517-201ENST00000364724 117 ntBASIC0.92□□□□□ -2.26
USP48Q86UV5 RNU6-604P-201ENST00000390917 100 ntBASIC0.92□□□□□ -2.26
USP48Q86UV5 RNU6-274P-201ENST00000459566 107 ntBASIC0.92□□□□□ -2.26
USP48Q86UV5 RNU4ATAC4P-201ENST00000516307 126 ntBASIC0.92□□□□□ -2.26
USP48Q86UV5 SNORA40.17-201ENST00000517256 115 ntBASIC0.92□□□□□ -2.26
USP48Q86UV5 RNU1-29P-201ENST00000606574 126 ntBASIC0.92□□□□□ -2.26
USP48Q86UV5 Y_RNA.386-201ENST00000383913 105 ntBASIC0.91□□□□□ -2.26
USP48Q86UV5 MIR146A-201ENST00000385201 99 ntBASIC0.91□□□□□ -2.26
USP48Q86UV5 RNU6-663P-201ENST00000391105 106 ntBASIC0.91□□□□□ -2.26
USP48Q86UV5 RNU5B-6P-201ENST00000516765 68 ntBASIC0.91□□□□□ -2.26
USP48Q86UV5 MIR4460-201ENST00000577862 86 ntBASIC0.91□□□□□ -2.26
USP48Q86UV5 MIR6866-201ENST00000638146 69 ntBASIC0.91□□□□□ -2.26
USP48Q86UV5 Y_RNA.340-201ENST00000365330 92 ntBASIC0.9□□□□□ -2.27
USP48Q86UV5 RNU6-982P-201ENST00000516216 102 ntBASIC0.9□□□□□ -2.27
USP48Q86UV5 MIR4711-201ENST00000578274 70 ntBASIC0.9□□□□□ -2.27
USP48Q86UV5 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.89□□□□□ -2.27
USP48Q86UV5 RNU6-1039P-201ENST00000383931 107 ntBASIC0.89□□□□□ -2.27
USP48Q86UV5 RNU6-895P-201ENST00000384125 103 ntBASIC0.89□□□□□ -2.27
USP48Q86UV5 RNU6-800P-201ENST00000384473 103 ntBASIC0.89□□□□□ -2.27
USP48Q86UV5 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.89□□□□□ -2.27
USP48Q86UV5 RNU6-881P-201ENST00000516813 102 ntBASIC0.89□□□□□ -2.27
USP48Q86UV5 MIR4752-201ENST00000579672 72 ntBASIC0.89□□□□□ -2.27
USP48Q86UV5 MIR8087-201ENST00000612745 78 ntBASIC0.89□□□□□ -2.27
USP48Q86UV5 MIR6509-201ENST00000614603 85 ntBASIC0.89□□□□□ -2.27
USP48Q86UV5 U6.111-201ENST00000636093 83 ntBASIC0.89□□□□□ -2.27
USP48Q86UV5 SNORD113.1-201ENST00000363280 73 ntBASIC0.88□□□□□ -2.27
USP48Q86UV5 RNU6-990P-201ENST00000364385 104 ntBASIC0.88□□□□□ -2.27
USP48Q86UV5 RNU6-590P-201ENST00000365039 107 ntBASIC0.88□□□□□ -2.27
USP48Q86UV5 SNORA70.25-201ENST00000612741 95 ntBASIC0.88□□□□□ -2.27
USP48Q86UV5 SNORD116-24-201ENST00000384549 92 ntBASIC0.87□□□□□ -2.27
USP48Q86UV5 RNU6-630P-201ENST00000391258 106 ntBASIC0.87□□□□□ -2.27
USP48Q86UV5 RNU6-752P-201ENST00000516376 102 ntBASIC0.87□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 134.4 ms