Protein–RNA interactions for Protein: Q5W0Q7

USPL1, SUMO-specific isopeptidase USPL1, humanhuman

Predictions only

Length 1,092 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USPL1Q5W0Q7 RNU6-330P-201ENST00000363015 107 ntBASIC1.07□□□□□ -2.24
USPL1Q5W0Q7 RNU6-110P-201ENST00000384508 104 ntBASIC1.07□□□□□ -2.24
USPL1Q5W0Q7 RNU6-1015P-201ENST00000517121 99 ntBASIC1.07□□□□□ -2.24
USPL1Q5W0Q7 RNU6-788P-201ENST00000390967 104 ntBASIC1.06□□□□□ -2.24
USPL1Q5W0Q7 RNU6-382P-201ENST00000365181 106 ntBASIC1.05□□□□□ -2.24
USPL1Q5W0Q7 SNORA8.1-201ENST00000384250 140 ntBASIC1.05□□□□□ -2.24
USPL1Q5W0Q7 MIR140-201ENST00000385282 100 ntBASIC1.05□□□□□ -2.24
USPL1Q5W0Q7 RNU6-687P-201ENST00000516443 89 ntBASIC1.05□□□□□ -2.24
USPL1Q5W0Q7 AC069503.3-201ENST00000618674 145 ntBASIC1.05□□□□□ -2.24
USPL1Q5W0Q7 MIR4773-1-201ENST00000637203 78 ntBASIC1.05□□□□□ -2.24
USPL1Q5W0Q7 AC114801.3-201ENST00000510231 177 ntBASIC1.04□□□□□ -2.24
USPL1Q5W0Q7 RNU6-70P-201ENST00000516438 60 ntBASIC1.04□□□□□ -2.24
USPL1Q5W0Q7 MIR3675-201ENST00000583661 73 ntBASIC1.04□□□□□ -2.24
USPL1Q5W0Q7 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.04□□□□□ -2.24
USPL1Q5W0Q7 Y_RNA.258-201ENST00000364613 105 ntBASIC1.03□□□□□ -2.24
USPL1Q5W0Q7 Y_RNA.374-201ENST00000365606 101 ntBASIC1.03□□□□□ -2.24
USPL1Q5W0Q7 RNU4ATAC4P-201ENST00000516307 126 ntBASIC1.03□□□□□ -2.24
USPL1Q5W0Q7 SNORA36.2-201ENST00000384004 127 ntBASIC1.02□□□□□ -2.25
USPL1Q5W0Q7 RNU6V-201ENST00000384105 107 ntBASIC1.02□□□□□ -2.25
USPL1Q5W0Q7 RNU6ATAC27P-201ENST00000408289 119 ntBASIC1.02□□□□□ -2.25
USPL1Q5W0Q7 ACA64.5-201ENST00000516207 127 ntBASIC1.02□□□□□ -2.25
USPL1Q5W0Q7 MIR7107-201ENST00000611489 80 ntBASIC1.02□□□□□ -2.25
USPL1Q5W0Q7 DLEU2_3.2-201ENST00000612883 73 ntBASIC1.02□□□□□ -2.25
USPL1Q5W0Q7 MIR6513-201ENST00000621188 64 ntBASIC1.02□□□□□ -2.25
USPL1Q5W0Q7 SNORD114-4-201ENST00000363962 75 ntBASIC1.01□□□□□ -2.25
USPL1Q5W0Q7 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC1.01□□□□□ -2.25
USPL1Q5W0Q7 RNU6-351P-201ENST00000516097 100 ntBASIC1.01□□□□□ -2.25
USPL1Q5W0Q7 RNU6-871P-201ENST00000516122 100 ntBASIC1.01□□□□□ -2.25
USPL1Q5W0Q7 RNA5SP484-201ENST00000458857 111 ntBASIC1□□□□□ -2.25
USPL1Q5W0Q7 AC092634.7-201ENST00000621022 103 ntBASIC1□□□□□ -2.25
USPL1Q5W0Q7 SNORD115-31-201ENST00000365318 82 ntBASIC0.99□□□□□ -2.25
USPL1Q5W0Q7 RNU6-54P-201ENST00000365563 107 ntBASIC0.99□□□□□ -2.25
USPL1Q5W0Q7 RNU6-587P-201ENST00000391282 106 ntBASIC0.99□□□□□ -2.25
USPL1Q5W0Q7 AL691482.2-201ENST00000457453 84 ntBASIC0.99□□□□□ -2.25
USPL1Q5W0Q7 MIR6835-201ENST00000621552 64 ntBASIC0.99□□□□□ -2.25
USPL1Q5W0Q7 RNU6-1187P-201ENST00000364771 110 ntBASIC0.98□□□□□ -2.25
USPL1Q5W0Q7 RNU6-540P-201ENST00000384622 101 ntBASIC0.98□□□□□ -2.25
USPL1Q5W0Q7 MIR193B-201ENST00000384907 83 ntBASIC0.98□□□□□ -2.25
USPL1Q5W0Q7 MIR936-201ENST00000401264 98 ntBASIC0.98□□□□□ -2.25
USPL1Q5W0Q7 Y_RNA.30-201ENST00000362572 97 ntBASIC0.97□□□□□ -2.25
USPL1Q5W0Q7 RNA5SP517-201ENST00000364724 117 ntBASIC0.97□□□□□ -2.25
USPL1Q5W0Q7 RNU6-1241P-201ENST00000384536 107 ntBASIC0.97□□□□□ -2.25
USPL1Q5W0Q7 MIR508-201ENST00000384857 115 ntBASIC0.97□□□□□ -2.25
USPL1Q5W0Q7 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC0.97□□□□□ -2.25
USPL1Q5W0Q7 RNU6-634P-201ENST00000459134 106 ntBASIC0.97□□□□□ -2.25
USPL1Q5W0Q7 PSMC1P5-201ENST00000512850 177 ntBASIC0.97□□□□□ -2.25
USPL1Q5W0Q7 MIR5706-201ENST00000579841 80 ntBASIC0.97□□□□□ -2.25
USPL1Q5W0Q7 SNORD114-2-201ENST00000363953 78 ntBASIC0.96□□□□□ -2.26
USPL1Q5W0Q7 RNU6-1039P-201ENST00000383931 107 ntBASIC0.96□□□□□ -2.26
USPL1Q5W0Q7 SNORA40.8-201ENST00000411034 126 ntBASIC0.96□□□□□ -2.26
USPL1Q5W0Q7 AC006210.1-201ENST00000424882 111 ntBASIC0.96□□□□□ -2.26
USPL1Q5W0Q7 RNU6-539P-201ENST00000516665 103 ntBASIC0.96□□□□□ -2.26
USPL1Q5W0Q7 AL590095.2-201ENST00000604136 117 ntBASIC0.96□□□□□ -2.26
USPL1Q5W0Q7 MIR8053-201ENST00000613344 75 ntBASIC0.96□□□□□ -2.26
USPL1Q5W0Q7 SNORD118-201ENST00000363593 134 ntBASIC0.95□□□□□ -2.26
USPL1Q5W0Q7 Y_RNA.386-201ENST00000383913 105 ntBASIC0.95□□□□□ -2.26
USPL1Q5W0Q7 SNORD71-201ENST00000411292 86 ntBASIC0.95□□□□□ -2.26
USPL1Q5W0Q7 NAMPTP3-201ENST00000569273 224 ntBASIC0.95□□□□□ -2.26
USPL1Q5W0Q7 MIR1273G-201ENST00000577677 100 ntBASIC0.95□□□□□ -2.26
USPL1Q5W0Q7 SNORD110-201ENST00000408189 75 ntBASIC0.94□□□□□ -2.26
USPL1Q5W0Q7 RNU6-848P-201ENST00000515948 107 ntBASIC0.94□□□□□ -2.26
USPL1Q5W0Q7 RNU6-617P-201ENST00000516147 107 ntBASIC0.94□□□□□ -2.26
USPL1Q5W0Q7 RNU6-473P-201ENST00000516164 107 ntBASIC0.94□□□□□ -2.26
USPL1Q5W0Q7 RNU6-1049P-201ENST00000516414 107 ntBASIC0.94□□□□□ -2.26
USPL1Q5W0Q7 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.94□□□□□ -2.26
USPL1Q5W0Q7 RNU6-590P-201ENST00000365039 107 ntBASIC0.93□□□□□ -2.26
USPL1Q5W0Q7 MIR154-201ENST00000385243 84 ntBASIC0.93□□□□□ -2.26
USPL1Q5W0Q7 MIR6509-201ENST00000614603 85 ntBASIC0.93□□□□□ -2.26
USPL1Q5W0Q7 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.93□□□□□ -2.26
USPL1Q5W0Q7 RNY1P8-201ENST00000383970 114 ntBASIC0.92□□□□□ -2.26
USPL1Q5W0Q7 SNORD45A-201ENST00000384512 84 ntBASIC0.92□□□□□ -2.26
USPL1Q5W0Q7 MIR1265-201ENST00000408444 86 ntBASIC0.92□□□□□ -2.26
USPL1Q5W0Q7 RNA5SP193-201ENST00000410353 107 ntBASIC0.92□□□□□ -2.26
USPL1Q5W0Q7 RPL39P28-201ENST00000465655 155 ntBASIC0.92□□□□□ -2.26
USPL1Q5W0Q7 MIR4653-201ENST00000585107 83 ntBASIC0.92□□□□□ -2.26
USPL1Q5W0Q7 SNORD115-22-201ENST00000364456 82 ntBASIC0.91□□□□□ -2.26
USPL1Q5W0Q7 Y_RNA.407-201ENST00000383986 113 ntBASIC0.91□□□□□ -2.26
USPL1Q5W0Q7 RNU6-649P-201ENST00000384463 107 ntBASIC0.91□□□□□ -2.26
USPL1Q5W0Q7 SNORD30.1-201ENST00000391309 70 ntBASIC0.91□□□□□ -2.26
USPL1Q5W0Q7 SNORD42B-201ENST00000458893 67 ntBASIC0.91□□□□□ -2.26
USPL1Q5W0Q7 U7.6-201ENST00000610841 64 ntBASIC0.91□□□□□ -2.26
USPL1Q5W0Q7 MIR6866-201ENST00000638146 69 ntBASIC0.91□□□□□ -2.26
USPL1Q5W0Q7 SNORD45.1-201ENST00000363181 77 ntBASIC0.9□□□□□ -2.27
USPL1Q5W0Q7 SNORD114-23-201ENST00000363536 72 ntBASIC0.9□□□□□ -2.27
USPL1Q5W0Q7 MIR518A1-201ENST00000385068 85 ntBASIC0.9□□□□□ -2.27
USPL1Q5W0Q7 RNU5B-6P-201ENST00000516765 68 ntBASIC0.9□□□□□ -2.27
USPL1Q5W0Q7 RNU6-663P-201ENST00000391105 106 ntBASIC0.89□□□□□ -2.27
USPL1Q5W0Q7 RNU6-863P-201ENST00000515989 104 ntBASIC0.89□□□□□ -2.27
USPL1Q5W0Q7 U6.111-201ENST00000636093 83 ntBASIC0.89□□□□□ -2.27
USPL1Q5W0Q7 Y_RNA.340-201ENST00000365330 92 ntBASIC0.88□□□□□ -2.27
USPL1Q5W0Q7 RNU6-260P-201ENST00000384092 107 ntBASIC0.88□□□□□ -2.27
USPL1Q5W0Q7 RNU6-800P-201ENST00000384473 103 ntBASIC0.88□□□□□ -2.27
USPL1Q5W0Q7 MIR4711-201ENST00000578274 70 ntBASIC0.88□□□□□ -2.27
USPL1Q5W0Q7 SNORA25.18-201ENST00000607153 114 ntBASIC0.88□□□□□ -2.27
USPL1Q5W0Q7 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0.87□□□□□ -2.27
USPL1Q5W0Q7 SNORD116-24-201ENST00000384549 92 ntBASIC0.87□□□□□ -2.27
USPL1Q5W0Q7 RNU6-604P-201ENST00000390917 100 ntBASIC0.87□□□□□ -2.27
USPL1Q5W0Q7 AC018659.1-201ENST00000551083 169 ntBASIC0.87□□□□□ -2.27
USPL1Q5W0Q7 SNORD113.1-201ENST00000363280 73 ntBASIC0.86□□□□□ -2.27
USPL1Q5W0Q7 Y_RNA.250-201ENST00000364542 110 ntBASIC0.86□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms