Protein–RNA interactions for Protein: A6NKD9

CCDC85C, Coiled-coil domain-containing protein 85C, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85CA6NKD9 SNORA63.2-201ENST00000362603 126 ntBASIC0.46□□□□□ -2.34
CCDC85CA6NKD9 MIR604-201ENST00000384880 94 ntBASIC0.46□□□□□ -2.34
CCDC85CA6NKD9 AL157398.1-201ENST00000452981 186 ntBASIC0.46□□□□□ -2.34
CCDC85CA6NKD9 RNA5SP170-201ENST00000517150 101 ntBASIC0.46□□□□□ -2.34
CCDC85CA6NKD9 MIR4460-201ENST00000577862 86 ntBASIC0.46□□□□□ -2.34
CCDC85CA6NKD9 AC108676.2-201ENST00000605225 163 ntBASIC0.46□□□□□ -2.34
CCDC85CA6NKD9 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0.45□□□□□ -2.34
CCDC85CA6NKD9 SNORD115-27-201ENST00000364430 82 ntBASIC0.45□□□□□ -2.34
CCDC85CA6NKD9 RNU6-402P-201ENST00000410678 103 ntBASIC0.45□□□□□ -2.34
CCDC85CA6NKD9 MIR5582-201ENST00000579697 68 ntBASIC0.45□□□□□ -2.34
CCDC85CA6NKD9 RNA5SP128-201ENST00000365305 116 ntBASIC0.44□□□□□ -2.34
CCDC85CA6NKD9 MIR760-201ENST00000390220 80 ntBASIC0.44□□□□□ -2.34
CCDC85CA6NKD9 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC0.44□□□□□ -2.34
CCDC85CA6NKD9 Y_RNA.558-201ENST00000384685 113 ntBASIC0.43□□□□□ -2.34
CCDC85CA6NKD9 RNU4ATAC4P-201ENST00000516307 126 ntBASIC0.43□□□□□ -2.34
CCDC85CA6NKD9 MIR4796-201ENST00000580742 81 ntBASIC0.43□□□□□ -2.34
CCDC85CA6NKD9 AP001180.6-201ENST00000584918 159 ntBASIC0.43□□□□□ -2.34
CCDC85CA6NKD9 SNORD114-31-201ENST00000363219 75 ntBASIC0.42□□□□□ -2.34
CCDC85CA6NKD9 Y_RNA.125-201ENST00000363371 111 ntBASIC0.42□□□□□ -2.34
CCDC85CA6NKD9 RNU6-1051P-201ENST00000365471 102 ntBASIC0.42□□□□□ -2.34
CCDC85CA6NKD9 SNORA24B-201ENST00000384176 131 ntBASIC0.42□□□□□ -2.34
CCDC85CA6NKD9 HMGN2P22-201ENST00000427588 175 ntBASIC0.42□□□□□ -2.34
CCDC85CA6NKD9 AC069113.3-201ENST00000521019 150 ntBASIC0.42□□□□□ -2.34
CCDC85CA6NKD9 MIR548AD-201ENST00000584780 82 ntBASIC0.42□□□□□ -2.34
CCDC85CA6NKD9 Y_RNA.17-201ENST00000362433 111 ntBASIC0.41□□□□□ -2.34
CCDC85CA6NKD9 SNORD95.1-201ENST00000364099 68 ntBASIC0.41□□□□□ -2.34
CCDC85CA6NKD9 MIR501-201ENST00000390204 84 ntBASIC0.41□□□□□ -2.34
CCDC85CA6NKD9 RNU6-1134P-201ENST00000365156 101 ntBASIC0.4□□□□□ -2.35
CCDC85CA6NKD9 Y_RNA.593-201ENST00000410292 98 ntBASIC0.4□□□□□ -2.35
CCDC85CA6NKD9 FGF7P7-201ENST00000514120 227 ntBASIC0.4□□□□□ -2.35
CCDC85CA6NKD9 RNU6-1232P-201ENST00000516299 86 ntBASIC0.4□□□□□ -2.35
CCDC85CA6NKD9 RNU6-294P-201ENST00000364999 102 ntBASIC0.39□□□□□ -2.35
CCDC85CA6NKD9 RNU6-815P-201ENST00000384080 113 ntBASIC0.39□□□□□ -2.35
CCDC85CA6NKD9 RNU6-1052P-201ENST00000411398 104 ntBASIC0.39□□□□□ -2.35
CCDC85CA6NKD9 AC073261.1-201ENST00000429409 121 ntBASIC0.39□□□□□ -2.35
CCDC85CA6NKD9 RNU7-129P-201ENST00000516128 62 ntBASIC0.39□□□□□ -2.35
CCDC85CA6NKD9 SNORA25.13-201ENST00000516395 103 ntBASIC0.39□□□□□ -2.35
CCDC85CA6NKD9 RNU6-719P-201ENST00000516671 104 ntBASIC0.39□□□□□ -2.35
CCDC85CA6NKD9 RNU6-267P-201ENST00000516714 103 ntBASIC0.39□□□□□ -2.35
CCDC85CA6NKD9 YWHAEP2-201ENST00000580066 112 ntBASIC0.39□□□□□ -2.35
CCDC85CA6NKD9 SNX3P1X-201ENST00000414887 175 ntBASIC0.38□□□□□ -2.35
CCDC85CA6NKD9 AC104692.1-201ENST00000472406 90 ntBASIC0.38□□□□□ -2.35
CCDC85CA6NKD9 RNU7-153P-201ENST00000516455 62 ntBASIC0.38□□□□□ -2.35
CCDC85CA6NKD9 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.38□□□□□ -2.35
CCDC85CA6NKD9 MIR4315-1-201ENST00000636800 73 ntBASIC0.38□□□□□ -2.35
CCDC85CA6NKD9 MIR4315-2-201ENST00000640925 73 ntBASIC0.38□□□□□ -2.35
CCDC85CA6NKD9 SNORD115-37-201ENST00000363768 82 ntBASIC0.37□□□□□ -2.35
CCDC85CA6NKD9 SNORD90-201ENST00000391145 111 ntBASIC0.37□□□□□ -2.35
CCDC85CA6NKD9 RNA5SP134-201ENST00000516492 96 ntBASIC0.37□□□□□ -2.35
CCDC85CA6NKD9 MIR3140-201ENST00000583685 90 ntBASIC0.37□□□□□ -2.35
CCDC85CA6NKD9 MIR4677-201ENST00000584153 80 ntBASIC0.37□□□□□ -2.35
CCDC85CA6NKD9 RNU5F-1-201ENST00000362507 117 ntBASIC0.36□□□□□ -2.35
CCDC85CA6NKD9 Y_RNA.43-201ENST00000362670 111 ntBASIC0.36□□□□□ -2.35
CCDC85CA6NKD9 AC093729.1-201ENST00000513074 128 ntBASIC0.36□□□□□ -2.35
CCDC85CA6NKD9 MIR548BB-201ENST00000626714 66 ntBASIC0.36□□□□□ -2.35
CCDC85CA6NKD9 RNU6V-201ENST00000384105 107 ntBASIC0.35□□□□□ -2.35
CCDC85CA6NKD9 Y_RNA.610-201ENST00000410681 103 ntBASIC0.34□□□□□ -2.36
CCDC85CA6NKD9 RNU5B-6P-201ENST00000516765 68 ntBASIC0.34□□□□□ -2.36
CCDC85CA6NKD9 Y_RNA.407-201ENST00000383986 113 ntBASIC0.33□□□□□ -2.36
CCDC85CA6NKD9 Y_RNA.437-201ENST00000384113 113 ntBASIC0.33□□□□□ -2.36
CCDC85CA6NKD9 RNU6-127P-201ENST00000390897 107 ntBASIC0.33□□□□□ -2.36
CCDC85CA6NKD9 RNU6-782P-201ENST00000516852 104 ntBASIC0.33□□□□□ -2.36
CCDC85CA6NKD9 AC140658.3-201ENST00000567603 271 ntBASIC0.33□□□□□ -2.36
CCDC85CA6NKD9 MIR4473-201ENST00000583731 91 ntBASIC0.33□□□□□ -2.36
CCDC85CA6NKD9 MIR499B-201ENST00000636498 73 ntBASIC0.33□□□□□ -2.36
CCDC85CA6NKD9 RNU6-624P-201ENST00000363411 107 ntBASIC0.32□□□□□ -2.36
CCDC85CA6NKD9 SNORA42.1-201ENST00000363515 137 ntBASIC0.32□□□□□ -2.36
CCDC85CA6NKD9 RNU6-46P-201ENST00000383860 107 ntBASIC0.32□□□□□ -2.36
CCDC85CA6NKD9 RNU6-1177P-201ENST00000391058 104 ntBASIC0.32□□□□□ -2.36
CCDC85CA6NKD9 RNU7-24P-201ENST00000458867 62 ntBASIC0.32□□□□□ -2.36
CCDC85CA6NKD9 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.31□□□□□ -2.36
CCDC85CA6NKD9 RNU6-161P-201ENST00000363051 106 ntBASIC0.31□□□□□ -2.36
CCDC85CA6NKD9 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC0.31□□□□□ -2.36
CCDC85CA6NKD9 RNU6ATAC17P-201ENST00000516074 71 ntBASIC0.31□□□□□ -2.36
CCDC85CA6NKD9 snoMBII-202.2-201ENST00000517263 86 ntBASIC0.31□□□□□ -2.36
CCDC85CA6NKD9 RNU6-1255P-201ENST00000363434 112 ntBASIC0.3□□□□□ -2.36
CCDC85CA6NKD9 RNU6-54P-201ENST00000365563 107 ntBASIC0.3□□□□□ -2.36
CCDC85CA6NKD9 MIR450A2-201ENST00000385022 100 ntBASIC0.3□□□□□ -2.36
CCDC85CA6NKD9 IGLL4P-201ENST00000614590 133 ntBASIC0.3□□□□□ -2.36
CCDC85CA6NKD9 RNU6-495P-201ENST00000362995 107 ntBASIC0.29□□□□□ -2.36
CCDC85CA6NKD9 MIR876-201ENST00000401147 81 ntBASIC0.29□□□□□ -2.36
CCDC85CA6NKD9 AC097510.1-201ENST00000510945 133 ntBASIC0.29□□□□□ -2.36
CCDC85CA6NKD9 uc_338.10-201ENST00000621872 182 ntBASIC0.29□□□□□ -2.36
CCDC85CA6NKD9 AC006160.2-201ENST00000637708 154 ntBASIC0.29□□□□□ -2.36
CCDC85CA6NKD9 RNY1P1-201ENST00000364372 112 ntBASIC0.28□□□□□ -2.36
CCDC85CA6NKD9 Y_RNA.611-201ENST00000410682 108 ntBASIC0.28□□□□□ -2.36
CCDC85CA6NKD9 MIR548AE1-201ENST00000583292 70 ntBASIC0.28□□□□□ -2.36
CCDC85CA6NKD9 MIR4743-201ENST00000584576 69 ntBASIC0.28□□□□□ -2.36
CCDC85CA6NKD9 U4.2-201ENST00000618561 85 ntBASIC0.28□□□□□ -2.36
CCDC85CA6NKD9 RNU6-652P-201ENST00000365488 107 ntBASIC0.27□□□□□ -2.37
CCDC85CA6NKD9 SNORD75.2-201ENST00000408784 58 ntBASIC0.27□□□□□ -2.37
CCDC85CA6NKD9 snoU13.17-201ENST00000458802 104 ntBASIC0.27□□□□□ -2.37
CCDC85CA6NKD9 RNU6-557P-201ENST00000516842 110 ntBASIC0.27□□□□□ -2.37
CCDC85CA6NKD9 MIR5588-201ENST00000581890 63 ntBASIC0.27□□□□□ -2.37
CCDC85CA6NKD9 MIR371B-201ENST00000638082 66 ntBASIC0.27□□□□□ -2.37
CCDC85CA6NKD9 MIR101-1-201ENST00000362265 75 ntBASIC0.26□□□□□ -2.37
CCDC85CA6NKD9 SNORD114-4-201ENST00000363962 75 ntBASIC0.26□□□□□ -2.37
CCDC85CA6NKD9 RNU6-302P-201ENST00000365249 107 ntBASIC0.26□□□□□ -2.37
CCDC85CA6NKD9 RNU6-979P-201ENST00000383896 107 ntBASIC0.26□□□□□ -2.37
CCDC85CA6NKD9 Y_RNA.660-201ENST00000516002 120 ntBASIC0.26□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 209 ms