Protein–RNA interactions for Protein: Q9Y6Q1

CAPN6, Calpain-6, humanhuman

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN6Q9Y6Q1 RNU1-124P-201ENST00000363861 145 ntBASIC1.19□□□□□ -2.22
CAPN6Q9Y6Q1 RNA5SP99-201ENST00000364020 114 ntBASIC1.19□□□□□ -2.22
CAPN6Q9Y6Q1 AL691482.2-201ENST00000457453 84 ntBASIC1.19□□□□□ -2.22
CAPN6Q9Y6Q1 RNA5SP255-201ENST00000516370 107 ntBASIC1.19□□□□□ -2.22
CAPN6Q9Y6Q1 RNU6-726P-201ENST00000364680 107 ntBASIC1.18□□□□□ -2.22
CAPN6Q9Y6Q1 RNU6-716P-201ENST00000365621 103 ntBASIC1.18□□□□□ -2.22
CAPN6Q9Y6Q1 RNU6-895P-201ENST00000384125 103 ntBASIC1.18□□□□□ -2.22
CAPN6Q9Y6Q1 RNU6-663P-201ENST00000391105 106 ntBASIC1.18□□□□□ -2.22
CAPN6Q9Y6Q1 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.17□□□□□ -2.22
CAPN6Q9Y6Q1 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC1.17□□□□□ -2.22
CAPN6Q9Y6Q1 RNU6-54P-201ENST00000365563 107 ntBASIC1.17□□□□□ -2.22
CAPN6Q9Y6Q1 SNORD45A-201ENST00000384512 84 ntBASIC1.17□□□□□ -2.22
CAPN6Q9Y6Q1 SCARNA16.5-201ENST00000517114 183 ntBASIC1.17□□□□□ -2.22
CAPN6Q9Y6Q1 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
CAPN6Q9Y6Q1 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
CAPN6Q9Y6Q1 RNU6V-201ENST00000384105 107 ntBASIC1.16□□□□□ -2.22
CAPN6Q9Y6Q1 MIR618-201ENST00000385287 98 ntBASIC1.16□□□□□ -2.22
CAPN6Q9Y6Q1 RNU6-604P-201ENST00000390917 100 ntBASIC1.16□□□□□ -2.22
CAPN6Q9Y6Q1 AC108667.1-201ENST00000428618 249 ntBASIC1.16□□□□□ -2.22
CAPN6Q9Y6Q1 NAMPTP3-201ENST00000569273 224 ntBASIC1.16□□□□□ -2.22
CAPN6Q9Y6Q1 U6.111-201ENST00000636093 83 ntBASIC1.16□□□□□ -2.22
CAPN6Q9Y6Q1 MIR337-201ENST00000362281 93 ntBASIC1.15□□□□□ -2.23
CAPN6Q9Y6Q1 SNORD115-22-201ENST00000364456 82 ntBASIC1.15□□□□□ -2.23
CAPN6Q9Y6Q1 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC1.15□□□□□ -2.23
CAPN6Q9Y6Q1 SNORD99-201ENST00000408612 74 ntBASIC1.15□□□□□ -2.23
CAPN6Q9Y6Q1 AC093423.1-201ENST00000440817 142 ntBASIC1.15□□□□□ -2.23
CAPN6Q9Y6Q1 RNU7-95P-201ENST00000459222 64 ntBASIC1.15□□□□□ -2.23
CAPN6Q9Y6Q1 RNU6-881P-201ENST00000516813 102 ntBASIC1.15□□□□□ -2.23
CAPN6Q9Y6Q1 MIR4460-201ENST00000577862 86 ntBASIC1.15□□□□□ -2.23
CAPN6Q9Y6Q1 AC011195.1-201ENST00000578177 177 ntBASIC1.15□□□□□ -2.23
CAPN6Q9Y6Q1 RNU6-1039P-201ENST00000383931 107 ntBASIC1.14□□□□□ -2.23
CAPN6Q9Y6Q1 RNU6-939P-201ENST00000384634 107 ntBASIC1.14□□□□□ -2.23
CAPN6Q9Y6Q1 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.14□□□□□ -2.23
CAPN6Q9Y6Q1 MIR6509-201ENST00000614603 85 ntBASIC1.14□□□□□ -2.23
CAPN6Q9Y6Q1 MT-TY-201ENST00000387409 66 ntBASIC1.13□□□□□ -2.23
CAPN6Q9Y6Q1 AC125388.1-201ENST00000459631 156 ntBASIC1.13□□□□□ -2.23
CAPN6Q9Y6Q1 AC103810.9-201ENST00000606688 112 ntBASIC1.13□□□□□ -2.23
CAPN6Q9Y6Q1 MIR18A-201ENST00000362310 71 ntBASIC1.12□□□□□ -2.23
CAPN6Q9Y6Q1 RNU1-141P-201ENST00000364623 158 ntBASIC1.12□□□□□ -2.23
CAPN6Q9Y6Q1 Y_RNA.338-201ENST00000365320 114 ntBASIC1.12□□□□□ -2.23
CAPN6Q9Y6Q1 RNU6-800P-201ENST00000384473 103 ntBASIC1.12□□□□□ -2.23
CAPN6Q9Y6Q1 SNORD114-21-201ENST00000606412 72 ntBASIC1.12□□□□□ -2.23
CAPN6Q9Y6Q1 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.12□□□□□ -2.23
CAPN6Q9Y6Q1 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.11□□□□□ -2.23
CAPN6Q9Y6Q1 Y_RNA.340-201ENST00000365330 92 ntBASIC1.11□□□□□ -2.23
CAPN6Q9Y6Q1 RNU4-45P-201ENST00000365469 141 ntBASIC1.11□□□□□ -2.23
CAPN6Q9Y6Q1 SNORA8.2-201ENST00000384372 139 ntBASIC1.11□□□□□ -2.23
CAPN6Q9Y6Q1 RNU6-269P-201ENST00000391077 97 ntBASIC1.11□□□□□ -2.23
CAPN6Q9Y6Q1 AP1B1P2-201ENST00000416196 106 ntBASIC1.11□□□□□ -2.23
CAPN6Q9Y6Q1 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC1.11□□□□□ -2.23
CAPN6Q9Y6Q1 AL353770.2-201ENST00000620024 78 ntBASIC1.11□□□□□ -2.23
CAPN6Q9Y6Q1 MIR6828-201ENST00000636181 60 ntBASIC1.11□□□□□ -2.23
CAPN6Q9Y6Q1 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.11□□□□□ -2.23
CAPN6Q9Y6Q1 SNORD113.1-201ENST00000363280 73 ntBASIC1.1□□□□□ -2.23
CAPN6Q9Y6Q1 Y_RNA.386-201ENST00000383913 105 ntBASIC1.1□□□□□ -2.23
CAPN6Q9Y6Q1 SNORD42B-201ENST00000458893 67 ntBASIC1.1□□□□□ -2.23
CAPN6Q9Y6Q1 RNA5SP227-201ENST00000516184 113 ntBASIC1.1□□□□□ -2.23
CAPN6Q9Y6Q1 RNU4ATAC4P-201ENST00000516307 126 ntBASIC1.1□□□□□ -2.23
CAPN6Q9Y6Q1 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.1□□□□□ -2.23
CAPN6Q9Y6Q1 MIR378A-201ENST00000362177 66 ntBASIC1.09□□□□□ -2.23
CAPN6Q9Y6Q1 MIR203A-201ENST00000384836 110 ntBASIC1.09□□□□□ -2.23
CAPN6Q9Y6Q1 AL162376.1-201ENST00000624117 175 ntBASIC1.09□□□□□ -2.23
CAPN6Q9Y6Q1 RNU6-1216P-201ENST00000362590 107 ntBASIC1.08□□□□□ -2.24
CAPN6Q9Y6Q1 RNA5SP484-201ENST00000458857 111 ntBASIC1.08□□□□□ -2.24
CAPN6Q9Y6Q1 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.08□□□□□ -2.24
CAPN6Q9Y6Q1 RNU6-630P-201ENST00000391258 106 ntBASIC1.07□□□□□ -2.24
CAPN6Q9Y6Q1 RNU6-1053P-201ENST00000515930 101 ntBASIC1.07□□□□□ -2.24
CAPN6Q9Y6Q1 MIR3657-201ENST00000584818 117 ntBASIC1.07□□□□□ -2.24
CAPN6Q9Y6Q1 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.07□□□□□ -2.24
CAPN6Q9Y6Q1 RNA5SP222-201ENST00000411039 105 ntBASIC1.06□□□□□ -2.24
CAPN6Q9Y6Q1 Y_RNA.676-201ENST00000516393 96 ntBASIC1.06□□□□□ -2.24
CAPN6Q9Y6Q1 RNA5SP268-201ENST00000516828 124 ntBASIC1.06□□□□□ -2.24
CAPN6Q9Y6Q1 RNA5SP94-201ENST00000516917 108 ntBASIC1.06□□□□□ -2.24
CAPN6Q9Y6Q1 AC005520.4-201ENST00000604337 90 ntBASIC1.06□□□□□ -2.24
CAPN6Q9Y6Q1 AC069503.3-201ENST00000618674 145 ntBASIC1.06□□□□□ -2.24
CAPN6Q9Y6Q1 SNORA36.1-201ENST00000363424 132 ntBASIC1.05□□□□□ -2.24
CAPN6Q9Y6Q1 SNORA25.4-201ENST00000363666 124 ntBASIC1.05□□□□□ -2.24
CAPN6Q9Y6Q1 RNU4-38P-201ENST00000364472 129 ntBASIC1.05□□□□□ -2.24
CAPN6Q9Y6Q1 RNU6-260P-201ENST00000384092 107 ntBASIC1.05□□□□□ -2.24
CAPN6Q9Y6Q1 Y_RNA.443-201ENST00000384135 111 ntBASIC1.05□□□□□ -2.24
CAPN6Q9Y6Q1 MIR7-2-201ENST00000384970 110 ntBASIC1.05□□□□□ -2.24
CAPN6Q9Y6Q1 MIR1265-201ENST00000408444 86 ntBASIC1.05□□□□□ -2.24
CAPN6Q9Y6Q1 AL603825.1-201ENST00000438481 80 ntBASIC1.05□□□□□ -2.24
CAPN6Q9Y6Q1 RNU5B-6P-201ENST00000516765 68 ntBASIC1.05□□□□□ -2.24
CAPN6Q9Y6Q1 AL353765.1-201ENST00000605514 183 ntBASIC1.05□□□□□ -2.24
CAPN6Q9Y6Q1 snoU13.31-201ENST00000607291 104 ntBASIC1.05□□□□□ -2.24
CAPN6Q9Y6Q1 SNORD114-4-201ENST00000363962 75 ntBASIC1.04□□□□□ -2.24
CAPN6Q9Y6Q1 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC1.04□□□□□ -2.24
CAPN6Q9Y6Q1 MIR4498-201ENST00000577599 66 ntBASIC1.04□□□□□ -2.24
CAPN6Q9Y6Q1 AC073869.9-201ENST00000641610 120 ntBASIC1.04□□□□□ -2.24
CAPN6Q9Y6Q1 SNORD116-24-201ENST00000384549 92 ntBASIC1.03□□□□□ -2.24
CAPN6Q9Y6Q1 RNU6-982P-201ENST00000516216 102 ntBASIC1.03□□□□□ -2.24
CAPN6Q9Y6Q1 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.02□□□□□ -2.25
CAPN6Q9Y6Q1 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.02□□□□□ -2.25
CAPN6Q9Y6Q1 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.02□□□□□ -2.25
CAPN6Q9Y6Q1 MIR4661-201ENST00000582720 75 ntBASIC1.02□□□□□ -2.25
CAPN6Q9Y6Q1 MIR4295-201ENST00000585286 85 ntBASIC1.02□□□□□ -2.25
CAPN6Q9Y6Q1 MIR7107-201ENST00000611489 80 ntBASIC1.02□□□□□ -2.25
CAPN6Q9Y6Q1 SNORA2.1-201ENST00000363089 137 ntBASIC1.01□□□□□ -2.25
CAPN6Q9Y6Q1 Y_RNA.205-201ENST00000364128 113 ntBASIC1.01□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 173.5 ms