Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 RNU6-1039P-201ENST00000383931 107 ntBASIC1.36□□□□□ -2.19
PCDHGA11Q9Y5H2 SNORA8.2-201ENST00000384372 139 ntBASIC1.36□□□□□ -2.19
PCDHGA11Q9Y5H2 MT-TY-201ENST00000387409 66 ntBASIC1.36□□□□□ -2.19
PCDHGA11Q9Y5H2 AC093423.1-201ENST00000440817 142 ntBASIC1.36□□□□□ -2.19
PCDHGA11Q9Y5H2 AC015712.3-201ENST00000559380 164 ntBASIC1.36□□□□□ -2.19
PCDHGA11Q9Y5H2 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.36□□□□□ -2.19
PCDHGA11Q9Y5H2 MIR6509-201ENST00000614603 85 ntBASIC1.36□□□□□ -2.19
PCDHGA11Q9Y5H2 RNU1-17P-201ENST00000363022 152 ntBASIC1.35□□□□□ -2.19
PCDHGA11Q9Y5H2 RNU1-141P-201ENST00000364623 158 ntBASIC1.35□□□□□ -2.19
PCDHGA11Q9Y5H2 SNORD115-31-201ENST00000365318 82 ntBASIC1.35□□□□□ -2.19
PCDHGA11Q9Y5H2 RNU6-54P-201ENST00000365563 107 ntBASIC1.35□□□□□ -2.19
PCDHGA11Q9Y5H2 RNA5SP227-201ENST00000516184 113 ntBASIC1.35□□□□□ -2.19
PCDHGA11Q9Y5H2 NAMPTP3-201ENST00000569273 224 ntBASIC1.35□□□□□ -2.19
PCDHGA11Q9Y5H2 MIR6828-201ENST00000636181 60 ntBASIC1.35□□□□□ -2.19
PCDHGA11Q9Y5H2 RNU6-237P-201ENST00000515985 71 ntBASIC1.34□□□□□ -2.19
PCDHGA11Q9Y5H2 SNORD114-4-201ENST00000363962 75 ntBASIC1.33□□□□□ -2.2
PCDHGA11Q9Y5H2 RNU6-939P-201ENST00000384634 107 ntBASIC1.33□□□□□ -2.2
PCDHGA11Q9Y5H2 AC125388.1-201ENST00000459631 156 ntBASIC1.33□□□□□ -2.2
PCDHGA11Q9Y5H2 MIR4769-201ENST00000584126 77 ntBASIC1.33□□□□□ -2.2
PCDHGA11Q9Y5H2 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.33□□□□□ -2.2
PCDHGA11Q9Y5H2 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.32□□□□□ -2.2
PCDHGA11Q9Y5H2 SNORD115-22-201ENST00000364456 82 ntBASIC1.32□□□□□ -2.2
PCDHGA11Q9Y5H2 SNORD45A-201ENST00000384512 84 ntBASIC1.32□□□□□ -2.2
PCDHGA11Q9Y5H2 RNU6-604P-201ENST00000390917 100 ntBASIC1.32□□□□□ -2.2
PCDHGA11Q9Y5H2 RNU6-269P-201ENST00000391077 97 ntBASIC1.32□□□□□ -2.2
PCDHGA11Q9Y5H2 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.32□□□□□ -2.2
PCDHGA11Q9Y5H2 RNU4ATAC4P-201ENST00000516307 126 ntBASIC1.32□□□□□ -2.2
PCDHGA11Q9Y5H2 RNU6-881P-201ENST00000516813 102 ntBASIC1.32□□□□□ -2.2
PCDHGA11Q9Y5H2 U6.111-201ENST00000636093 83 ntBASIC1.32□□□□□ -2.2
PCDHGA11Q9Y5H2 MIR758-201ENST00000390227 88 ntBASIC1.31□□□□□ -2.2
PCDHGA11Q9Y5H2 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC1.31□□□□□ -2.2
PCDHGA11Q9Y5H2 MIR4303-201ENST00000581299 66 ntBASIC1.31□□□□□ -2.2
PCDHGA11Q9Y5H2 AL353997.5-201ENST00000618886 171 ntBASIC1.31□□□□□ -2.2
PCDHGA11Q9Y5H2 RNA5SP268-201ENST00000516828 124 ntBASIC1.3□□□□□ -2.2
PCDHGA11Q9Y5H2 AC068338.1-201ENST00000565567 176 ntBASIC1.3□□□□□ -2.2
PCDHGA11Q9Y5H2 MIR4661-201ENST00000582720 75 ntBASIC1.3□□□□□ -2.2
PCDHGA11Q9Y5H2 AL162376.1-201ENST00000624117 175 ntBASIC1.3□□□□□ -2.2
PCDHGA11Q9Y5H2 RNU6-1216P-201ENST00000362590 107 ntBASIC1.29□□□□□ -2.2
PCDHGA11Q9Y5H2 RNU6-482P-201ENST00000391068 107 ntBASIC1.29□□□□□ -2.2
PCDHGA11Q9Y5H2 RNA5SP222-201ENST00000411039 105 ntBASIC1.29□□□□□ -2.2
PCDHGA11Q9Y5H2 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.29□□□□□ -2.2
PCDHGA11Q9Y5H2 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.29□□□□□ -2.2
PCDHGA11Q9Y5H2 AC069503.3-201ENST00000618674 145 ntBASIC1.29□□□□□ -2.2
PCDHGA11Q9Y5H2 AC073869.9-201ENST00000641610 120 ntBASIC1.29□□□□□ -2.2
PCDHGA11Q9Y5H2 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC1.29□□□□□ -2.2
PCDHGA11Q9Y5H2 MIR337-201ENST00000362281 93 ntBASIC1.28□□□□□ -2.2
PCDHGA11Q9Y5H2 SNORD113.1-201ENST00000363280 73 ntBASIC1.28□□□□□ -2.2
PCDHGA11Q9Y5H2 RNU6-260P-201ENST00000384092 107 ntBASIC1.28□□□□□ -2.2
PCDHGA11Q9Y5H2 RNU6-800P-201ENST00000384473 103 ntBASIC1.28□□□□□ -2.2
PCDHGA11Q9Y5H2 AL353765.1-201ENST00000605514 183 ntBASIC1.28□□□□□ -2.2
PCDHGA11Q9Y5H2 MIR7-2-201ENST00000384970 110 ntBASIC1.27□□□□□ -2.21
PCDHGA11Q9Y5H2 RNA5SP94-201ENST00000516917 108 ntBASIC1.27□□□□□ -2.21
PCDHGA11Q9Y5H2 RNA5SP99-201ENST00000364020 114 ntBASIC1.26□□□□□ -2.21
PCDHGA11Q9Y5H2 Y_RNA.340-201ENST00000365330 92 ntBASIC1.26□□□□□ -2.21
PCDHGA11Q9Y5H2 MIR203A-201ENST00000384836 110 ntBASIC1.26□□□□□ -2.21
PCDHGA11Q9Y5H2 SNORD42B-201ENST00000458893 67 ntBASIC1.26□□□□□ -2.21
PCDHGA11Q9Y5H2 RNA5SP458-201ENST00000516188 119 ntBASIC1.26□□□□□ -2.21
PCDHGA11Q9Y5H2 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC1.25□□□□□ -2.21
PCDHGA11Q9Y5H2 SNORA17.3-201ENST00000391159 129 ntBASIC1.25□□□□□ -2.21
PCDHGA11Q9Y5H2 RNU6-630P-201ENST00000391258 106 ntBASIC1.25□□□□□ -2.21
PCDHGA11Q9Y5H2 RNA5SP484-201ENST00000458857 111 ntBASIC1.25□□□□□ -2.21
PCDHGA11Q9Y5H2 SNORA36.1-201ENST00000363424 132 ntBASIC1.24□□□□□ -2.21
PCDHGA11Q9Y5H2 MTND4LP1-201ENST00000446263 157 ntBASIC1.24□□□□□ -2.21
PCDHGA11Q9Y5H2 RNU5B-6P-201ENST00000516765 68 ntBASIC1.24□□□□□ -2.21
PCDHGA11Q9Y5H2 MIR4421-201ENST00000578133 69 ntBASIC1.24□□□□□ -2.21
PCDHGA11Q9Y5H2 MIR3657-201ENST00000584818 117 ntBASIC1.24□□□□□ -2.21
PCDHGA11Q9Y5H2 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
PCDHGA11Q9Y5H2 RNU4-62P-201ENST00000410125 130 ntBASIC1.22□□□□□ -2.21
PCDHGA11Q9Y5H2 AC108667.1-201ENST00000428618 249 ntBASIC1.22□□□□□ -2.21
PCDHGA11Q9Y5H2 MIR3660-201ENST00000584845 100 ntBASIC1.22□□□□□ -2.21
PCDHGA11Q9Y5H2 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
PCDHGA11Q9Y5H2 SNORA40.6-201ENST00000391153 128 ntBASIC1.21□□□□□ -2.22
PCDHGA11Q9Y5H2 AC006210.1-201ENST00000424882 111 ntBASIC1.21□□□□□ -2.22
PCDHGA11Q9Y5H2 SNORA2.1-201ENST00000363089 137 ntBASIC1.2□□□□□ -2.22
PCDHGA11Q9Y5H2 SNORA25.4-201ENST00000363666 124 ntBASIC1.2□□□□□ -2.22
PCDHGA11Q9Y5H2 SNORA36.2-201ENST00000384004 127 ntBASIC1.2□□□□□ -2.22
PCDHGA11Q9Y5H2 Y_RNA.443-201ENST00000384135 111 ntBASIC1.2□□□□□ -2.22
PCDHGA11Q9Y5H2 RNU7-95P-201ENST00000459222 64 ntBASIC1.2□□□□□ -2.22
PCDHGA11Q9Y5H2 SNORD110-201ENST00000408189 75 ntBASIC1.19□□□□□ -2.22
PCDHGA11Q9Y5H2 AC005520.4-201ENST00000604337 90 ntBASIC1.19□□□□□ -2.22
PCDHGA11Q9Y5H2 MIR7107-201ENST00000611489 80 ntBASIC1.19□□□□□ -2.22
PCDHGA11Q9Y5H2 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
PCDHGA11Q9Y5H2 Y_RNA.338-201ENST00000365320 114 ntBASIC1.18□□□□□ -2.22
PCDHGA11Q9Y5H2 Y_RNA.386-201ENST00000383913 105 ntBASIC1.18□□□□□ -2.22
PCDHGA11Q9Y5H2 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC1.18□□□□□ -2.22
PCDHGA11Q9Y5H2 RNU6-668P-201ENST00000364180 107 ntBASIC1.17□□□□□ -2.22
PCDHGA11Q9Y5H2 Y_RNA.250-201ENST00000364542 110 ntBASIC1.17□□□□□ -2.22
PCDHGA11Q9Y5H2 RNU6-471P-201ENST00000383944 106 ntBASIC1.17□□□□□ -2.22
PCDHGA11Q9Y5H2 Y_RNA.407-201ENST00000383986 113 ntBASIC1.17□□□□□ -2.22
PCDHGA11Q9Y5H2 AC018659.1-201ENST00000551083 169 ntBASIC1.17□□□□□ -2.22
PCDHGA11Q9Y5H2 MIR378A-201ENST00000362177 66 ntBASIC1.16□□□□□ -2.22
PCDHGA11Q9Y5H2 MIR608-201ENST00000384820 100 ntBASIC1.16□□□□□ -2.22
PCDHGA11Q9Y5H2 AP1B1P2-201ENST00000416196 106 ntBASIC1.16□□□□□ -2.22
PCDHGA11Q9Y5H2 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.16□□□□□ -2.22
PCDHGA11Q9Y5H2 AL353770.2-201ENST00000620024 78 ntBASIC1.16□□□□□ -2.22
PCDHGA11Q9Y5H2 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.16□□□□□ -2.22
PCDHGA11Q9Y5H2 SNORD116-24-201ENST00000384549 92 ntBASIC1.15□□□□□ -2.23
PCDHGA11Q9Y5H2 MIR140-201ENST00000385282 100 ntBASIC1.15□□□□□ -2.23
PCDHGA11Q9Y5H2 RNU6-982P-201ENST00000516216 102 ntBASIC1.15□□□□□ -2.23
PCDHGA11Q9Y5H2 AC092634.7-201ENST00000621022 103 ntBASIC1.14□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 249.9 ms