Protein–RNA interactions for Protein: Q9BYR3

KRTAP4-4, Keratin-associated protein 4-4, humanhuman

Predictions only

Length 166 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-4Q9BYR3 AL157834.3-201ENST00000615543 103 ntBASIC0.71□□□□□ -2.3
KRTAP4-4Q9BYR3 MIR6076-201ENST00000617521 113 ntBASIC0.71□□□□□ -2.3
KRTAP4-4Q9BYR3 SNORD19B.1-201ENST00000630615 80 ntBASIC0.71□□□□□ -2.3
KRTAP4-4Q9BYR3 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC0.71□□□□□ -2.3
KRTAP4-4Q9BYR3 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC0.71□□□□□ -2.3
KRTAP4-4Q9BYR3 TTN-204ENST00000360870 18218 ntTSL 5 BASIC0.71□□□□□ -2.3
KRTAP4-4Q9BYR3 FTX-214ENST00000638437 12267 ntTSL 5 BASIC0.71□□□□□ -2.3
KRTAP4-4Q9BYR3 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC0.7□□□□□ -2.3
KRTAP4-4Q9BYR3 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC0.7□□□□□ -2.3
KRTAP4-4Q9BYR3 MIRLET7A2-201ENST00000362105 72 ntBASIC0.7□□□□□ -2.3
KRTAP4-4Q9BYR3 SNORA60-201ENST00000362396 134 ntBASIC0.7□□□□□ -2.3
KRTAP4-4Q9BYR3 U8.9-201ENST00000365667 134 ntBASIC0.7□□□□□ -2.3
KRTAP4-4Q9BYR3 SNORA5A-201ENST00000384111 134 ntBASIC0.7□□□□□ -2.3
KRTAP4-4Q9BYR3 RNU1-148P-201ENST00000384472 162 ntBASIC0.7□□□□□ -2.3
KRTAP4-4Q9BYR3 RNVU1-14-201ENST00000384770 164 ntBASIC0.7□□□□□ -2.3
KRTAP4-4Q9BYR3 MIR128-1-201ENST00000384921 82 ntBASIC0.7□□□□□ -2.3
KRTAP4-4Q9BYR3 SNORA48.2-201ENST00000390926 124 ntBASIC0.7□□□□□ -2.3
KRTAP4-4Q9BYR3 RNU6ATAC-201ENST00000408749 126 ntBASIC0.7□□□□□ -2.3
KRTAP4-4Q9BYR3 RPS29P4-201ENST00000414733 161 ntBASIC0.7□□□□□ -2.3
KRTAP4-4Q9BYR3 COTL1P1-201ENST00000422309 375 ntBASIC0.7□□□□□ -2.3
KRTAP4-4Q9BYR3 HMGN2P27-201ENST00000427352 270 ntBASIC0.7□□□□□ -2.3
KRTAP4-4Q9BYR3 RN7SL429P-201ENST00000479090 223 ntBASIC0.7□□□□□ -2.3
KRTAP4-4Q9BYR3 RN7SL489P-201ENST00000486185 223 ntBASIC0.7□□□□□ -2.3
KRTAP4-4Q9BYR3 RN7SL327P-201ENST00000488659 223 ntBASIC0.7□□□□□ -2.3
KRTAP4-4Q9BYR3 AC026436.1-201ENST00000510537 270 ntBASIC0.7□□□□□ -2.3
KRTAP4-4Q9BYR3 RNA5SP73-201ENST00000516744 108 ntBASIC0.7□□□□□ -2.3
KRTAP4-4Q9BYR3 RNU7-188P-201ENST00000517063 64 ntBASIC0.7□□□□□ -2.3
KRTAP4-4Q9BYR3 AC087499.8-201ENST00000578406 226 ntBASIC0.7□□□□□ -2.3
KRTAP4-4Q9BYR3 MIR4444-1-201ENST00000581696 74 ntBASIC0.7□□□□□ -2.3
KRTAP4-4Q9BYR3 MIR3199-1-201ENST00000582434 88 ntBASIC0.7□□□□□ -2.3
KRTAP4-4Q9BYR3 MIR4444-2-201ENST00000584390 74 ntBASIC0.7□□□□□ -2.3
KRTAP4-4Q9BYR3 GHRLOS.1-201ENST00000610995 70 ntBASIC0.7□□□□□ -2.3
KRTAP4-4Q9BYR3 RN7SL853P-201ENST00000617250 223 ntBASIC0.7□□□□□ -2.3
KRTAP4-4Q9BYR3 MIR7151-201ENST00000617477 60 ntBASIC0.7□□□□□ -2.3
KRTAP4-4Q9BYR3 AL391099.1-201ENST00000624635 187 ntBASIC0.7□□□□□ -2.3
KRTAP4-4Q9BYR3 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC0.7□□□□□ -2.3
KRTAP4-4Q9BYR3 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC0.7□□□□□ -2.3
KRTAP4-4Q9BYR3 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC0.7□□□□□ -2.3
KRTAP4-4Q9BYR3 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC0.7□□□□□ -2.3
KRTAP4-4Q9BYR3 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC0.7□□□□□ -2.3
KRTAP4-4Q9BYR3 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC0.7□□□□□ -2.3
KRTAP4-4Q9BYR3 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC0.7□□□□□ -2.3
KRTAP4-4Q9BYR3 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC0.69□□□□□ -2.3
KRTAP4-4Q9BYR3 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC0.69□□□□□ -2.3
KRTAP4-4Q9BYR3 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC0.69□□□□□ -2.3
KRTAP4-4Q9BYR3 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC0.69□□□□□ -2.3
KRTAP4-4Q9BYR3 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC0.69□□□□□ -2.3
KRTAP4-4Q9BYR3 MIRLET7A3-201ENST00000362116 74 ntBASIC0.69□□□□□ -2.3
KRTAP4-4Q9BYR3 RNU1-105P-201ENST00000363470 161 ntBASIC0.69□□□□□ -2.3
KRTAP4-4Q9BYR3 Y_RNA.181-201ENST00000363872 101 ntBASIC0.69□□□□□ -2.3
KRTAP4-4Q9BYR3 RNU6-973P-201ENST00000364690 107 ntBASIC0.69□□□□□ -2.3
KRTAP4-4Q9BYR3 Y_RNA.564-201ENST00000384708 106 ntBASIC0.69□□□□□ -2.3
KRTAP4-4Q9BYR3 MIR194-1-201ENST00000384892 85 ntBASIC0.69□□□□□ -2.3
KRTAP4-4Q9BYR3 MIR218-1-201ENST00000384999 110 ntBASIC0.69□□□□□ -2.3
KRTAP4-4Q9BYR3 MIR218-2-201ENST00000385006 110 ntBASIC0.69□□□□□ -2.3
KRTAP4-4Q9BYR3 MIR518A1-201ENST00000385068 85 ntBASIC0.69□□□□□ -2.3
KRTAP4-4Q9BYR3 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC0.69□□□□□ -2.3
KRTAP4-4Q9BYR3 MIR887-201ENST00000401258 79 ntBASIC0.69□□□□□ -2.3
KRTAP4-4Q9BYR3 SNORD111-201ENST00000408139 94 ntBASIC0.69□□□□□ -2.3
KRTAP4-4Q9BYR3 RNU6-1133P-201ENST00000410963 100 ntBASIC0.69□□□□□ -2.3
KRTAP4-4Q9BYR3 AC096531.1-201ENST00000419107 107 ntBASIC0.69□□□□□ -2.3
KRTAP4-4Q9BYR3 SNORA71B-202ENST00000439232 272 ntBASIC0.69□□□□□ -2.3
KRTAP4-4Q9BYR3 RNU1-95P-201ENST00000516357 160 ntBASIC0.69□□□□□ -2.3
KRTAP4-4Q9BYR3 RNU1-128P-201ENST00000516704 160 ntBASIC0.69□□□□□ -2.3
KRTAP4-4Q9BYR3 MIR4524B-201ENST00000581569 115 ntBASIC0.69□□□□□ -2.3
KRTAP4-4Q9BYR3 RN7SL435P-201ENST00000584418 282 ntBASIC0.69□□□□□ -2.3
KRTAP4-4Q9BYR3 AL731768.1-201ENST00000603124 139 ntBASIC0.69□□□□□ -2.3
KRTAP4-4Q9BYR3 5S_rRNA.16-201ENST00000612928 119 ntBASIC0.69□□□□□ -2.3
KRTAP4-4Q9BYR3 MIR8058-201ENST00000615737 89 ntBASIC0.69□□□□□ -2.3
KRTAP4-4Q9BYR3 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC0.69□□□□□ -2.3
KRTAP4-4Q9BYR3 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC0.69□□□□□ -2.3
KRTAP4-4Q9BYR3 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC0.69□□□□□ -2.3
KRTAP4-4Q9BYR3 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC0.68□□□□□ -2.3
KRTAP4-4Q9BYR3 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC0.68□□□□□ -2.3
KRTAP4-4Q9BYR3 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC0.68□□□□□ -2.3
KRTAP4-4Q9BYR3 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC0.68□□□□□ -2.3
KRTAP4-4Q9BYR3 RNA5SP374-201ENST00000362939 125 ntBASIC0.68□□□□□ -2.3
KRTAP4-4Q9BYR3 SNORA67.1-201ENST00000364749 141 ntBASIC0.68□□□□□ -2.3
KRTAP4-4Q9BYR3 RNA5SP22-201ENST00000365393 109 ntBASIC0.68□□□□□ -2.3
KRTAP4-4Q9BYR3 MIR491-201ENST00000384877 84 ntBASIC0.68□□□□□ -2.3
KRTAP4-4Q9BYR3 MIR124-2-201ENST00000385081 109 ntBASIC0.68□□□□□ -2.3
KRTAP4-4Q9BYR3 MT-TM-201ENST00000387377 68 ntBASIC0.68□□□□□ -2.3
KRTAP4-4Q9BYR3 TRAJ33-201ENST00000390504 57 ntAPPRIS P1 BASIC0.68□□□□□ -2.3
KRTAP4-4Q9BYR3 MIR1271-201ENST00000408537 86 ntBASIC0.68□□□□□ -2.3
KRTAP4-4Q9BYR3 AC004965.1-201ENST00000413033 213 ntBASIC0.68□□□□□ -2.3
KRTAP4-4Q9BYR3 AC090616.4-201ENST00000448026 115 ntBASIC0.68□□□□□ -2.3
KRTAP4-4Q9BYR3 SNORA70.24-201ENST00000517233 118 ntBASIC0.68□□□□□ -2.3
KRTAP4-4Q9BYR3 AC079600.2-201ENST00000550076 130 ntBASIC0.68□□□□□ -2.3
KRTAP4-4Q9BYR3 MIR3139-201ENST00000579145 76 ntBASIC0.68□□□□□ -2.3
KRTAP4-4Q9BYR3 MIR6734-201ENST00000621166 68 ntBASIC0.68□□□□□ -2.3
KRTAP4-4Q9BYR3 MIR6828-201ENST00000636181 60 ntBASIC0.68□□□□□ -2.3
KRTAP4-4Q9BYR3 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC0.68□□□□□ -2.3
KRTAP4-4Q9BYR3 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC0.68□□□□□ -2.3
KRTAP4-4Q9BYR3 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC0.68□□□□□ -2.3
KRTAP4-4Q9BYR3 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC0.68□□□□□ -2.3
KRTAP4-4Q9BYR3 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC0.68□□□□□ -2.3
KRTAP4-4Q9BYR3 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC0.68□□□□□ -2.3
KRTAP4-4Q9BYR3 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC0.67□□□□□ -2.3
KRTAP4-4Q9BYR3 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC0.67□□□□□ -2.3
KRTAP4-4Q9BYR3 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC0.67□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 240.8 ms