Protein–RNA interactions for Protein: Q9BYB0

SHANK3, SH3 and multiple ankyrin repeat domains protein 3, humanhuman

Predictions only

Length 1,731 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3Q9BYB0 RNU6-65P-201ENST00000516332 98 ntBASIC-0.89□□□□□ -2.55
SHANK3Q9BYB0 AP001340.1-201ENST00000624405 217 ntBASIC-0.89□□□□□ -2.55
SHANK3Q9BYB0 MIR3658-201ENST00000636291 56 ntBASIC-0.89□□□□□ -2.55
SHANK3Q9BYB0 Y_RNA.228-201ENST00000364346 98 ntBASIC-0.9□□□□□ -2.55
SHANK3Q9BYB0 Y_RNA.353-201ENST00000365440 108 ntBASIC-0.9□□□□□ -2.55
SHANK3Q9BYB0 Y_RNA.555-201ENST00000384673 110 ntBASIC-0.9□□□□□ -2.55
SHANK3Q9BYB0 MIR451A-201ENST00000385059 72 ntBASIC-0.9□□□□□ -2.55
SHANK3Q9BYB0 RNU6-1052P-201ENST00000411398 104 ntBASIC-0.9□□□□□ -2.55
SHANK3Q9BYB0 RNA5SP461-201ENST00000516451 104 ntBASIC-0.9□□□□□ -2.55
SHANK3Q9BYB0 RNU6-719P-201ENST00000516671 104 ntBASIC-0.9□□□□□ -2.55
SHANK3Q9BYB0 Y_RNA.812-201ENST00000610788 101 ntBASIC-0.9□□□□□ -2.55
SHANK3Q9BYB0 Y_RNA.784-201ENST00000613803 101 ntBASIC-0.9□□□□□ -2.55
SHANK3Q9BYB0 Y_RNA.787-201ENST00000616522 101 ntBASIC-0.9□□□□□ -2.55
SHANK3Q9BYB0 Y_RNA.780-201ENST00000617336 101 ntBASIC-0.9□□□□□ -2.55
SHANK3Q9BYB0 Y_RNA.801-201ENST00000619005 101 ntBASIC-0.9□□□□□ -2.55
SHANK3Q9BYB0 U4.1-201ENST00000620349 87 ntBASIC-0.9□□□□□ -2.55
SHANK3Q9BYB0 Y_RNA.441-201ENST00000384123 112 ntBASIC-0.91□□□□□ -2.55
SHANK3Q9BYB0 AP000533.3-201ENST00000447704 118 ntBASIC-0.91□□□□□ -2.55
SHANK3Q9BYB0 snoU13.13-201ENST00000458842 104 ntBASIC-0.91□□□□□ -2.55
SHANK3Q9BYB0 Y_RNA.674-201ENST00000516362 113 ntBASIC-0.91□□□□□ -2.55
SHANK3Q9BYB0 RNU6-1153P-201ENST00000516760 105 ntBASIC-0.91□□□□□ -2.55
SHANK3Q9BYB0 YWHAEP3-201ENST00000582767 121 ntBASIC-0.91□□□□□ -2.55
SHANK3Q9BYB0 Y_RNA.189-201ENST00000363959 112 ntBASIC-0.92□□□□□ -2.56
SHANK3Q9BYB0 Y_RNA.247-201ENST00000364500 92 ntBASIC-0.92□□□□□ -2.56
SHANK3Q9BYB0 Y_RNA.272-201ENST00000364696 102 ntBASIC-0.92□□□□□ -2.56
SHANK3Q9BYB0 SNORD50.2-201ENST00000365465 70 ntBASIC-0.92□□□□□ -2.56
SHANK3Q9BYB0 Y_RNA.459-201ENST00000384251 102 ntBASIC-0.92□□□□□ -2.56
SHANK3Q9BYB0 RNU6-476P-201ENST00000384726 107 ntBASIC-0.92□□□□□ -2.56
SHANK3Q9BYB0 SNORD83B-201ENST00000386745 93 ntBASIC-0.92□□□□□ -2.56
SHANK3Q9BYB0 AC022137.1-201ENST00000483735 151 ntBASIC-0.92□□□□□ -2.56
SHANK3Q9BYB0 RNU4ATAC9P-201ENST00000517146 126 ntBASIC-0.92□□□□□ -2.56
SHANK3Q9BYB0 RNU6-111P-201ENST00000517179 105 ntBASIC-0.92□□□□□ -2.56
SHANK3Q9BYB0 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC-0.92□□□□□ -2.56
SHANK3Q9BYB0 RNU6-1216P-201ENST00000362590 107 ntBASIC-0.92□□□□□ -2.56
SHANK3Q9BYB0 RNU6-495P-201ENST00000362995 107 ntBASIC-0.92□□□□□ -2.56
SHANK3Q9BYB0 MIRLET7B-201ENST00000385140 83 ntBASIC-0.92□□□□□ -2.56
SHANK3Q9BYB0 MIR1263-201ENST00000408324 86 ntBASIC-0.92□□□□□ -2.56
SHANK3Q9BYB0 SNORD18.2-201ENST00000459604 70 ntBASIC-0.92□□□□□ -2.56
SHANK3Q9BYB0 Y_RNA.668-201ENST00000516233 93 ntBASIC-0.92□□□□□ -2.56
SHANK3Q9BYB0 Y_RNA.240-201ENST00000364469 95 ntBASIC-0.93□□□□□ -2.56
SHANK3Q9BYB0 Y_RNA.344-201ENST00000365381 112 ntBASIC-0.93□□□□□ -2.56
SHANK3Q9BYB0 RNU6-54P-201ENST00000365563 107 ntBASIC-0.93□□□□□ -2.56
SHANK3Q9BYB0 Y_RNA.616-201ENST00000410835 95 ntBASIC-0.93□□□□□ -2.56
SHANK3Q9BYB0 RNU7-24P-201ENST00000458867 62 ntBASIC-0.93□□□□□ -2.56
SHANK3Q9BYB0 AC022559.1-201ENST00000520905 205 ntBASIC-0.93□□□□□ -2.56
SHANK3Q9BYB0 AC141273.2-201ENST00000618989 130 ntBASIC-0.93□□□□□ -2.56
SHANK3Q9BYB0 RNU7-197P-201ENST00000458836 62 ntBASIC-0.94□□□□□ -2.56
SHANK3Q9BYB0 SNORA63-201ENST00000363450 132 ntBASIC-0.95□□□□□ -2.56
SHANK3Q9BYB0 SNORA62.4-201ENST00000365504 151 ntBASIC-0.95□□□□□ -2.56
SHANK3Q9BYB0 MIR577-201ENST00000385196 96 ntBASIC-0.95□□□□□ -2.56
SHANK3Q9BYB0 Y_RNA.680-201ENST00000516441 93 ntBASIC-0.95□□□□□ -2.56
SHANK3Q9BYB0 RNU6-1236P-201ENST00000517080 99 ntBASIC-0.95□□□□□ -2.56
SHANK3Q9BYB0 MIR6773-201ENST00000612812 74 ntBASIC-0.95□□□□□ -2.56
SHANK3Q9BYB0 RNU6-151P-201ENST00000364158 107 ntBASIC-0.95□□□□□ -2.56
SHANK3Q9BYB0 RNU6-915P-201ENST00000364943 103 ntBASIC-0.95□□□□□ -2.56
SHANK3Q9BYB0 Y_RNA.309-201ENST00000365046 111 ntBASIC-0.95□□□□□ -2.56
SHANK3Q9BYB0 Y_RNA.346-201ENST00000365385 112 ntBASIC-0.95□□□□□ -2.56
SHANK3Q9BYB0 Y_RNA.377-201ENST00000365644 108 ntBASIC-0.95□□□□□ -2.56
SHANK3Q9BYB0 RNU6-337P-201ENST00000391243 106 ntBASIC-0.95□□□□□ -2.56
SHANK3Q9BYB0 MIR4439-201ENST00000583746 80 ntBASIC-0.95□□□□□ -2.56
SHANK3Q9BYB0 Y_RNA.163-201ENST00000363702 113 ntBASIC-0.96□□□□□ -2.56
SHANK3Q9BYB0 RNU4-11P-201ENST00000365287 132 ntBASIC-0.96□□□□□ -2.56
SHANK3Q9BYB0 MIR568-201ENST00000385036 95 ntBASIC-0.96□□□□□ -2.56
SHANK3Q9BYB0 SNORA81.3-201ENST00000517283 198 ntBASIC-0.96□□□□□ -2.56
SHANK3Q9BYB0 MIR8068-201ENST00000618032 68 ntBASIC-0.96□□□□□ -2.56
SHANK3Q9BYB0 Y_RNA.778-201ENST00000620203 90 ntBASIC-0.96□□□□□ -2.56
SHANK3Q9BYB0 MIRLET7F1-201ENST00000362202 87 ntBASIC-0.97□□□□□ -2.56
SHANK3Q9BYB0 SNORD114-25-201ENST00000363742 72 ntBASIC-0.97□□□□□ -2.56
SHANK3Q9BYB0 MIR548U-201ENST00000390728 81 ntBASIC-0.97□□□□□ -2.56
SHANK3Q9BYB0 RNU6-1250P-201ENST00000391218 107 ntBASIC-0.97□□□□□ -2.56
SHANK3Q9BYB0 SNORD42B-201ENST00000458893 67 ntBASIC-0.97□□□□□ -2.56
SHANK3Q9BYB0 RNA5SP180-201ENST00000516181 101 ntBASIC-0.97□□□□□ -2.56
SHANK3Q9BYB0 MIR3115-201ENST00000577915 68 ntBASIC-0.97□□□□□ -2.56
SHANK3Q9BYB0 SNORA63.2-201ENST00000362603 126 ntBASIC-0.98□□□□□ -2.57
SHANK3Q9BYB0 RNU6-832P-201ENST00000363319 107 ntBASIC-0.98□□□□□ -2.57
SHANK3Q9BYB0 RNY1P11-201ENST00000363759 113 ntBASIC-0.98□□□□□ -2.57
SHANK3Q9BYB0 MIR517B-201ENST00000385102 67 ntBASIC-0.98□□□□□ -2.57
SHANK3Q9BYB0 RNU6-460P-201ENST00000391158 108 ntBASIC-0.98□□□□□ -2.57
SHANK3Q9BYB0 RNU7-120P-201ENST00000459334 63 ntBASIC-0.98□□□□□ -2.57
SHANK3Q9BYB0 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC-0.98□□□□□ -2.57
SHANK3Q9BYB0 Y_RNA.193-201ENST00000363979 102 ntBASIC-0.98□□□□□ -2.57
SHANK3Q9BYB0 Y_RNA.452-201ENST00000384202 108 ntBASIC-0.98□□□□□ -2.57
SHANK3Q9BYB0 Y_RNA.580-201ENST00000391004 95 ntBASIC-0.98□□□□□ -2.57
SHANK3Q9BYB0 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC-0.98□□□□□ -2.57
SHANK3Q9BYB0 Y_RNA.489-201ENST00000384410 101 ntBASIC-0.99□□□□□ -2.57
SHANK3Q9BYB0 RNU6-905P-201ENST00000384434 107 ntBASIC-0.99□□□□□ -2.57
SHANK3Q9BYB0 MTATP6P29-201ENST00000415057 132 ntBASIC-0.99□□□□□ -2.57
SHANK3Q9BYB0 RNU6-762P-201ENST00000517107 102 ntBASIC-0.99□□□□□ -2.57
SHANK3Q9BYB0 MIR4679-2-201ENST00000578358 77 ntBASIC-0.99□□□□□ -2.57
SHANK3Q9BYB0 AC025166.1-201ENST00000612411 163 ntBASIC-0.99□□□□□ -2.57
SHANK3Q9BYB0 SNORA15B-2-201ENST00000384058 135 ntBASIC-1□□□□□ -2.57
SHANK3Q9BYB0 SNORA15B-1-201ENST00000384334 135 ntBASIC-1□□□□□ -2.57
SHANK3Q9BYB0 RNU6-816P-201ENST00000390914 107 ntBASIC-1□□□□□ -2.57
SHANK3Q9BYB0 RNU6-1177P-201ENST00000391058 104 ntBASIC-1□□□□□ -2.57
SHANK3Q9BYB0 RNU6-1268P-201ENST00000391214 107 ntBASIC-1□□□□□ -2.57
SHANK3Q9BYB0 RNU6-1239P-201ENST00000391310 107 ntBASIC-1□□□□□ -2.57
SHANK3Q9BYB0 RNU6-861P-201ENST00000516745 106 ntBASIC-1□□□□□ -2.57
SHANK3Q9BYB0 Y_RNA.250-201ENST00000364542 110 ntBASIC-1.01□□□□□ -2.57
SHANK3Q9BYB0 RNU6-158P-201ENST00000517104 100 ntBASIC-1.01□□□□□ -2.57
SHANK3Q9BYB0 AL513043.2-201ENST00000573941 143 ntBASIC-1.01□□□□□ -2.57
Retrieved 100 of 98,524 protein–RNA pairs in 10.8 ms