Protein–RNA interactions for Protein: Q8IWA6

CCDC60, Coiled-coil domain-containing protein 60, humanhuman

Predicted RBP Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60Q8IWA6 MIRLET7F1-201ENST00000362202 87 ntBASIC-0.3□□□□□ -2.46
CCDC60Q8IWA6 RNU6-1107P-201ENST00000364817 104 ntBASIC-0.3□□□□□ -2.46
CCDC60Q8IWA6 RNU6ATAC11P-201ENST00000408541 125 ntBASIC-0.3□□□□□ -2.46
CCDC60Q8IWA6 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC-0.3□□□□□ -2.46
CCDC60Q8IWA6 MIR548Z-201ENST00000584743 97 ntBASIC-0.3□□□□□ -2.46
CCDC60Q8IWA6 SNORA18.1-201ENST00000363418 128 ntBASIC-0.31□□□□□ -2.46
CCDC60Q8IWA6 MIR548M-201ENST00000408260 86 ntBASIC-0.31□□□□□ -2.46
CCDC60Q8IWA6 AC008267.6-201ENST00000441664 139 ntBASIC-0.31□□□□□ -2.46
CCDC60Q8IWA6 RNU7-85P-201ENST00000458851 63 ntBASIC-0.31□□□□□ -2.46
CCDC60Q8IWA6 SNORD4A-201ENST00000459174 72 ntBASIC-0.31□□□□□ -2.46
CCDC60Q8IWA6 MIR548O2-201ENST00000616090 70 ntBASIC-0.31□□□□□ -2.46
CCDC60Q8IWA6 SNORD49B-201ENST00000365172 72 ntBASIC-0.32□□□□□ -2.46
CCDC60Q8IWA6 RNU6-302P-201ENST00000365249 107 ntBASIC-0.32□□□□□ -2.46
CCDC60Q8IWA6 MIR652-201ENST00000385278 98 ntBASIC-0.32□□□□□ -2.46
CCDC60Q8IWA6 Y_RNA.601-201ENST00000410500 113 ntBASIC-0.32□□□□□ -2.46
CCDC60Q8IWA6 Y_RNA.677-201ENST00000516401 85 ntBASIC-0.32□□□□□ -2.46
CCDC60Q8IWA6 AC012531.4-201ENST00000616509 177 ntBASIC-0.32□□□□□ -2.46
CCDC60Q8IWA6 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC-0.32□□□□□ -2.46
CCDC60Q8IWA6 RNU6-644P-201ENST00000391155 98 ntBASIC-0.33□□□□□ -2.46
CCDC60Q8IWA6 SNORA19.1-201ENST00000410656 129 ntBASIC-0.33□□□□□ -2.46
CCDC60Q8IWA6 TMSB4XP3-201ENST00000445144 114 ntBASIC-0.33□□□□□ -2.46
CCDC60Q8IWA6 FGF7P7-201ENST00000514120 227 ntBASIC-0.33□□□□□ -2.46
CCDC60Q8IWA6 RNU6-762P-201ENST00000517107 102 ntBASIC-0.33□□□□□ -2.46
CCDC60Q8IWA6 MIR4777-201ENST00000583710 86 ntBASIC-0.33□□□□□ -2.46
CCDC60Q8IWA6 AL365222.1-201ENST00000614661 98 ntBASIC-0.33□□□□□ -2.46
CCDC60Q8IWA6 DLEU2_3.1-201ENST00000620005 73 ntBASIC-0.33□□□□□ -2.46
CCDC60Q8IWA6 RNA5SP98-201ENST00000363158 137 ntBASIC-0.34□□□□□ -2.46
CCDC60Q8IWA6 Y_RNA.437-201ENST00000384113 113 ntBASIC-0.34□□□□□ -2.46
CCDC60Q8IWA6 RNU6-175P-201ENST00000516896 107 ntBASIC-0.34□□□□□ -2.46
CCDC60Q8IWA6 MIR20A-201ENST00000362279 71 ntBASIC-0.35□□□□□ -2.47
CCDC60Q8IWA6 RNU6-54P-201ENST00000365563 107 ntBASIC-0.35□□□□□ -2.47
CCDC60Q8IWA6 RNU6-1036P-201ENST00000383959 104 ntBASIC-0.35□□□□□ -2.47
CCDC60Q8IWA6 RNU6-1052P-201ENST00000411398 104 ntBASIC-0.35□□□□□ -2.47
CCDC60Q8IWA6 AC244250.2-201ENST00000418731 148 ntBASIC-0.35□□□□□ -2.47
CCDC60Q8IWA6 RNU6-719P-201ENST00000516671 104 ntBASIC-0.35□□□□□ -2.47
CCDC60Q8IWA6 MIR6507-201ENST00000613630 70 ntBASIC-0.35□□□□□ -2.47
CCDC60Q8IWA6 RNU6-132P-201ENST00000383863 107 ntBASIC-0.36□□□□□ -2.47
CCDC60Q8IWA6 MIR548U-201ENST00000390728 81 ntBASIC-0.36□□□□□ -2.47
CCDC60Q8IWA6 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-0.36□□□□□ -2.47
CCDC60Q8IWA6 SCARNA23-201ENST00000516060 130 ntBASIC-0.36□□□□□ -2.47
CCDC60Q8IWA6 RNU6-1144P-201ENST00000384247 104 ntBASIC-0.37□□□□□ -2.47
CCDC60Q8IWA6 RNU6-476P-201ENST00000384726 107 ntBASIC-0.37□□□□□ -2.47
CCDC60Q8IWA6 MIR214-201ENST00000385214 110 ntBASIC-0.37□□□□□ -2.47
CCDC60Q8IWA6 RNU6-519P-201ENST00000410590 108 ntBASIC-0.37□□□□□ -2.47
CCDC60Q8IWA6 Y_RNA.68-201ENST00000362881 102 ntBASIC-0.38□□□□□ -2.47
CCDC60Q8IWA6 RNU6-81P-201ENST00000365608 104 ntBASIC-0.38□□□□□ -2.47
CCDC60Q8IWA6 U3.27-201ENST00000391237 200 ntBASIC-0.38□□□□□ -2.47
CCDC60Q8IWA6 RNU6-1064P-201ENST00000410626 104 ntBASIC-0.38□□□□□ -2.47
CCDC60Q8IWA6 RNU6-904P-201ENST00000516206 101 ntBASIC-0.38□□□□□ -2.47
CCDC60Q8IWA6 MIR3666-201ENST00000607845 111 ntBASIC-0.38□□□□□ -2.47
CCDC60Q8IWA6 RNU6-811P-201ENST00000384069 107 ntBASIC-0.39□□□□□ -2.47
CCDC60Q8IWA6 MIR1302-5-201ENST00000408164 150 ntBASIC-0.39□□□□□ -2.47
CCDC60Q8IWA6 AC244090.1-201ENST00000441884 93 ntBASIC-0.39□□□□□ -2.47
CCDC60Q8IWA6 SNORD4B-201ENST00000459083 72 ntBASIC-0.39□□□□□ -2.47
CCDC60Q8IWA6 SCARNA17.3-201ENST00000516381 125 ntBASIC-0.39□□□□□ -2.47
CCDC60Q8IWA6 Y_RNA.705-201ENST00000516862 110 ntBASIC-0.39□□□□□ -2.47
CCDC60Q8IWA6 MIR3064-201ENST00000581130 66 ntBASIC-0.39□□□□□ -2.47
CCDC60Q8IWA6 RNU6-320P-201ENST00000516511 106 ntBASIC-0.4□□□□□ -2.47
CCDC60Q8IWA6 MIR4263-201ENST00000584745 83 ntBASIC-0.4□□□□□ -2.47
CCDC60Q8IWA6 AC104996.3-201ENST00000590718 94 ntBASIC-0.4□□□□□ -2.47
CCDC60Q8IWA6 MIR6129-201ENST00000616087 109 ntBASIC-0.4□□□□□ -2.47
CCDC60Q8IWA6 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC-0.4□□□□□ -2.47
CCDC60Q8IWA6 RNA5SP205-201ENST00000364653 136 ntBASIC-0.41□□□□□ -2.48
CCDC60Q8IWA6 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC-0.41□□□□□ -2.48
CCDC60Q8IWA6 AP000676.1-201ENST00000533307 52 ntBASIC-0.41□□□□□ -2.48
CCDC60Q8IWA6 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC-0.41□□□□□ -2.48
CCDC60Q8IWA6 RNU6-455P-201ENST00000384681 107 ntBASIC-0.42□□□□□ -2.48
CCDC60Q8IWA6 RNU6-972P-201ENST00000391208 107 ntBASIC-0.42□□□□□ -2.48
CCDC60Q8IWA6 MIR3140-201ENST00000583685 90 ntBASIC-0.42□□□□□ -2.48
CCDC60Q8IWA6 Y_RNA.491-201ENST00000384417 107 ntBASIC-0.43□□□□□ -2.48
CCDC60Q8IWA6 MIR590-201ENST00000385008 97 ntBASIC-0.43□□□□□ -2.48
CCDC60Q8IWA6 RNU6-887P-201ENST00000410660 100 ntBASIC-0.43□□□□□ -2.48
CCDC60Q8IWA6 RNU6-62P-201ENST00000516526 102 ntBASIC-0.43□□□□□ -2.48
CCDC60Q8IWA6 MIR4788-201ENST00000639104 80 ntBASIC-0.43□□□□□ -2.48
CCDC60Q8IWA6 MIR655-201ENST00000362159 97 ntBASIC-0.44□□□□□ -2.48
CCDC60Q8IWA6 SNORA63.2-201ENST00000362603 126 ntBASIC-0.44□□□□□ -2.48
CCDC60Q8IWA6 Y_RNA.96-201ENST00000363092 109 ntBASIC-0.44□□□□□ -2.48
CCDC60Q8IWA6 SNORD114-4-201ENST00000363962 75 ntBASIC-0.44□□□□□ -2.48
CCDC60Q8IWA6 SNORD58A-201ENST00000383875 65 ntBASIC-0.44□□□□□ -2.48
CCDC60Q8IWA6 RNU6-22P-201ENST00000384355 107 ntBASIC-0.44□□□□□ -2.48
CCDC60Q8IWA6 RNU6-1117P-201ENST00000384525 104 ntBASIC-0.44□□□□□ -2.48
CCDC60Q8IWA6 RNA5SP300-201ENST00000391197 107 ntBASIC-0.44□□□□□ -2.48
CCDC60Q8IWA6 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.44□□□□□ -2.48
CCDC60Q8IWA6 RNU6-1056P-201ENST00000383996 107 ntBASIC-0.45□□□□□ -2.48
CCDC60Q8IWA6 SNORA19-201ENST00000384737 128 ntBASIC-0.45□□□□□ -2.48
CCDC60Q8IWA6 RNA5SP292-201ENST00000390974 118 ntBASIC-0.45□□□□□ -2.48
CCDC60Q8IWA6 RNU6-554P-201ENST00000410466 106 ntBASIC-0.45□□□□□ -2.48
CCDC60Q8IWA6 SNORD42B-201ENST00000458893 67 ntBASIC-0.45□□□□□ -2.48
CCDC60Q8IWA6 MIR4802-201ENST00000581881 80 ntBASIC-0.45□□□□□ -2.48
CCDC60Q8IWA6 RNU4-32P-201ENST00000363404 141 ntBASIC-0.46□□□□□ -2.48
CCDC60Q8IWA6 RNA5SP275-201ENST00000363936 118 ntBASIC-0.46□□□□□ -2.48
CCDC60Q8IWA6 MIR582-201ENST00000365731 98 ntBASIC-0.46□□□□□ -2.48
CCDC60Q8IWA6 RNU6-1168P-201ENST00000390831 104 ntBASIC-0.46□□□□□ -2.48
CCDC60Q8IWA6 RNU6-1154P-201ENST00000391001 104 ntBASIC-0.46□□□□□ -2.48
CCDC60Q8IWA6 RNU7-61P-201ENST00000515897 61 ntBASIC-0.46□□□□□ -2.48
CCDC60Q8IWA6 Y_RNA.107-201ENST00000363190 121 ntBASIC-0.47□□□□□ -2.48
CCDC60Q8IWA6 RNU6-1113P-201ENST00000384348 107 ntBASIC-0.47□□□□□ -2.48
CCDC60Q8IWA6 RNU6-106P-201ENST00000384405 107 ntBASIC-0.47□□□□□ -2.48
CCDC60Q8IWA6 RNU6-109P-201ENST00000516364 107 ntBASIC-0.47□□□□□ -2.48
CCDC60Q8IWA6 RNU6-184P-201ENST00000516514 107 ntBASIC-0.47□□□□□ -2.48
Retrieved 100 of 98,524 protein–RNA pairs in 179 ms