Protein–RNA interactions for Protein: Q7Z6J0

SH3RF1, E3 ubiquitin-protein ligase SH3RF1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1Q7Z6J0 MIR7-2-201ENST00000384970 110 ntBASIC1.96□□□□□ -2.1
SH3RF1Q7Z6J0 RNU7-56P-201ENST00000458744 62 ntBASIC1.96□□□□□ -2.1
SH3RF1Q7Z6J0 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC1.96□□□□□ -2.1
SH3RF1Q7Z6J0 SNORD115-24-201ENST00000363528 82 ntBASIC1.95□□□□□ -2.1
SH3RF1Q7Z6J0 RNU6-260P-201ENST00000384092 107 ntBASIC1.95□□□□□ -2.1
SH3RF1Q7Z6J0 MIR617-201ENST00000385030 97 ntBASIC1.95□□□□□ -2.1
SH3RF1Q7Z6J0 Y_RNA.327-201ENST00000365201 102 ntBASIC1.94□□□□□ -2.1
SH3RF1Q7Z6J0 RNU6-656P-201ENST00000516785 107 ntBASIC1.94□□□□□ -2.1
SH3RF1Q7Z6J0 RNU6-902P-201ENST00000517212 91 ntBASIC1.94□□□□□ -2.1
SH3RF1Q7Z6J0 SNORA40.17-201ENST00000517256 115 ntBASIC1.94□□□□□ -2.1
SH3RF1Q7Z6J0 MIR4255-201ENST00000579351 72 ntBASIC1.94□□□□□ -2.1
SH3RF1Q7Z6J0 RNU6-92P-201ENST00000605893 104 ntBASIC1.94□□□□□ -2.1
SH3RF1Q7Z6J0 MIR502-201ENST00000606349 86 ntBASIC1.94□□□□□ -2.1
SH3RF1Q7Z6J0 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
SH3RF1Q7Z6J0 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
SH3RF1Q7Z6J0 RNU6-54P-201ENST00000365563 107 ntBASIC1.93□□□□□ -2.1
SH3RF1Q7Z6J0 SNORD79.1-201ENST00000516069 84 ntBASIC1.93□□□□□ -2.1
SH3RF1Q7Z6J0 SNORA31.14-201ENST00000516728 116 ntBASIC1.93□□□□□ -2.1
SH3RF1Q7Z6J0 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.93□□□□□ -2.1
SH3RF1Q7Z6J0 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
SH3RF1Q7Z6J0 Y_RNA.32-201ENST00000362589 110 ntBASIC1.92□□□□□ -2.1
SH3RF1Q7Z6J0 SNORA2.1-201ENST00000363089 137 ntBASIC1.92□□□□□ -2.1
SH3RF1Q7Z6J0 SNORD42B-201ENST00000458893 67 ntBASIC1.92□□□□□ -2.1
SH3RF1Q7Z6J0 RNU7-161P-201ENST00000517289 62 ntBASIC1.92□□□□□ -2.1
SH3RF1Q7Z6J0 MIR6504-201ENST00000613520 61 ntBASIC1.92□□□□□ -2.1
SH3RF1Q7Z6J0 uc_338.16-201ENST00000621804 95 ntBASIC1.92□□□□□ -2.1
SH3RF1Q7Z6J0 SNORD60.1-201ENST00000362451 73 ntBASIC1.91□□□□□ -2.1
SH3RF1Q7Z6J0 MIR519E-201ENST00000385075 84 ntBASIC1.91□□□□□ -2.1
SH3RF1Q7Z6J0 RNU6-1089P-201ENST00000516473 104 ntBASIC1.91□□□□□ -2.1
SH3RF1Q7Z6J0 AC012493.3-201ENST00000604494 112 ntBASIC1.91□□□□□ -2.1
SH3RF1Q7Z6J0 MIR6739-201ENST00000622461 75 ntBASIC1.91□□□□□ -2.1
SH3RF1Q7Z6J0 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.91□□□□□ -2.1
SH3RF1Q7Z6J0 RNU6-392P-201ENST00000364926 101 ntBASIC1.9□□□□□ -2.11
SH3RF1Q7Z6J0 RNU6-302P-201ENST00000365249 107 ntBASIC1.9□□□□□ -2.11
SH3RF1Q7Z6J0 SNORA75.1-201ENST00000391130 148 ntBASIC1.9□□□□□ -2.11
SH3RF1Q7Z6J0 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.9□□□□□ -2.11
SH3RF1Q7Z6J0 SNORA70.22-201ENST00000517160 124 ntBASIC1.9□□□□□ -2.11
SH3RF1Q7Z6J0 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.89□□□□□ -2.11
SH3RF1Q7Z6J0 RNU7-104P-201ENST00000459398 79 ntBASIC1.89□□□□□ -2.11
SH3RF1Q7Z6J0 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.89□□□□□ -2.11
SH3RF1Q7Z6J0 RNU1-42P-201ENST00000364033 160 ntBASIC1.88□□□□□ -2.11
SH3RF1Q7Z6J0 MIR222-201ENST00000384992 110 ntBASIC1.88□□□□□ -2.11
SH3RF1Q7Z6J0 MIR1827-201ENST00000408549 66 ntBASIC1.87□□□□□ -2.11
SH3RF1Q7Z6J0 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
SH3RF1Q7Z6J0 RNU6V-201ENST00000384105 107 ntBASIC1.86□□□□□ -2.11
SH3RF1Q7Z6J0 SNORD12-201ENST00000391002 90 ntBASIC1.86□□□□□ -2.11
SH3RF1Q7Z6J0 AC067863.3-201ENST00000624172 122 ntBASIC1.86□□□□□ -2.11
SH3RF1Q7Z6J0 Y_RNA.540-201ENST00000384638 111 ntBASIC1.85□□□□□ -2.11
SH3RF1Q7Z6J0 RNU4-88P-201ENST00000411220 86 ntBASIC1.85□□□□□ -2.11
SH3RF1Q7Z6J0 RNU7-74P-201ENST00000459104 62 ntBASIC1.85□□□□□ -2.11
SH3RF1Q7Z6J0 RMST_2.1-201ENST00000617263 136 ntBASIC1.85□□□□□ -2.11
SH3RF1Q7Z6J0 RNU6-990P-201ENST00000364385 104 ntBASIC1.84□□□□□ -2.11
SH3RF1Q7Z6J0 RNU1-123P-201ENST00000458950 160 ntBASIC1.84□□□□□ -2.11
SH3RF1Q7Z6J0 RNU6-135P-201ENST00000516769 101 ntBASIC1.84□□□□□ -2.11
SH3RF1Q7Z6J0 MIR4285-201ENST00000581001 85 ntBASIC1.84□□□□□ -2.11
SH3RF1Q7Z6J0 AL136317.1-201ENST00000612653 226 ntBASIC1.84□□□□□ -2.11
SH3RF1Q7Z6J0 RNU6-469P-201ENST00000516253 101 ntBASIC1.83□□□□□ -2.12
SH3RF1Q7Z6J0 RNA5SP147-201ENST00000516493 109 ntBASIC1.83□□□□□ -2.12
SH3RF1Q7Z6J0 MIR4452-201ENST00000583004 71 ntBASIC1.83□□□□□ -2.12
SH3RF1Q7Z6J0 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
SH3RF1Q7Z6J0 RNU6-1312P-201ENST00000362425 108 ntBASIC1.82□□□□□ -2.12
SH3RF1Q7Z6J0 Y_RNA.250-201ENST00000364542 110 ntBASIC1.82□□□□□ -2.12
SH3RF1Q7Z6J0 MIR3122-201ENST00000577243 73 ntBASIC1.82□□□□□ -2.12
SH3RF1Q7Z6J0 MIR548V-201ENST00000584165 80 ntBASIC1.82□□□□□ -2.12
SH3RF1Q7Z6J0 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.82□□□□□ -2.12
SH3RF1Q7Z6J0 SNORA7.1-201ENST00000363750 139 ntBASIC1.81□□□□□ -2.12
SH3RF1Q7Z6J0 RNA5SP363-201ENST00000365072 115 ntBASIC1.81□□□□□ -2.12
SH3RF1Q7Z6J0 RNA5SP102-201ENST00000516865 106 ntBASIC1.81□□□□□ -2.12
SH3RF1Q7Z6J0 SNORD53B-201ENST00000577887 78 ntBASIC1.81□□□□□ -2.12
SH3RF1Q7Z6J0 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
SH3RF1Q7Z6J0 Y_RNA.379-201ENST00000365653 102 ntBASIC1.8□□□□□ -2.12
SH3RF1Q7Z6J0 MIR630-201ENST00000384957 97 ntBASIC1.8□□□□□ -2.12
SH3RF1Q7Z6J0 MT-TY-201ENST00000387409 66 ntBASIC1.8□□□□□ -2.12
SH3RF1Q7Z6J0 MIR548L-201ENST00000408303 86 ntBASIC1.8□□□□□ -2.12
SH3RF1Q7Z6J0 AL157398.1-201ENST00000452981 186 ntBASIC1.8□□□□□ -2.12
SH3RF1Q7Z6J0 AC018659.1-201ENST00000551083 169 ntBASIC1.8□□□□□ -2.12
SH3RF1Q7Z6J0 RNU6-520P-201ENST00000384717 104 ntBASIC1.79□□□□□ -2.12
SH3RF1Q7Z6J0 SNORD114-22-201ENST00000365423 72 ntBASIC1.78□□□□□ -2.12
SH3RF1Q7Z6J0 MIR521-2-201ENST00000384818 87 ntBASIC1.78□□□□□ -2.12
SH3RF1Q7Z6J0 SNORD41.1-201ENST00000391000 69 ntBASIC1.78□□□□□ -2.12
SH3RF1Q7Z6J0 AC002350.1-201ENST00000490759 375 ntBASIC1.78□□□□□ -2.12
SH3RF1Q7Z6J0 RNU6-42P-201ENST00000384165 107 ntBASIC1.77□□□□□ -2.13
SH3RF1Q7Z6J0 RNU6-1162P-201ENST00000384443 104 ntBASIC1.77□□□□□ -2.13
SH3RF1Q7Z6J0 MIR1323-201ENST00000408090 73 ntBASIC1.77□□□□□ -2.13
SH3RF1Q7Z6J0 MIR4639-201ENST00000584938 69 ntBASIC1.77□□□□□ -2.13
SH3RF1Q7Z6J0 uc_338.10-201ENST00000621872 182 ntBASIC1.77□□□□□ -2.13
SH3RF1Q7Z6J0 RNU6-698P-201ENST00000363523 107 ntBASIC1.76□□□□□ -2.13
SH3RF1Q7Z6J0 RNU6-34P-201ENST00000364874 107 ntBASIC1.76□□□□□ -2.13
SH3RF1Q7Z6J0 MIR644A-201ENST00000385262 94 ntBASIC1.76□□□□□ -2.13
SH3RF1Q7Z6J0 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.76□□□□□ -2.13
SH3RF1Q7Z6J0 AC002429.1-201ENST00000437672 148 ntBASIC1.76□□□□□ -2.13
SH3RF1Q7Z6J0 RNU7-174P-201ENST00000516248 59 ntBASIC1.76□□□□□ -2.13
SH3RF1Q7Z6J0 MIR4421-201ENST00000578133 69 ntBASIC1.76□□□□□ -2.13
SH3RF1Q7Z6J0 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.76□□□□□ -2.13
SH3RF1Q7Z6J0 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
SH3RF1Q7Z6J0 SNORD113-2-201ENST00000391082 72 ntBASIC1.75□□□□□ -2.13
SH3RF1Q7Z6J0 SNORA67.6-201ENST00000391093 99 ntBASIC1.75□□□□□ -2.13
SH3RF1Q7Z6J0 RNU4ATAC4P-201ENST00000516307 126 ntBASIC1.75□□□□□ -2.13
SH3RF1Q7Z6J0 RNU6-1110P-201ENST00000516462 101 ntBASIC1.75□□□□□ -2.13
SH3RF1Q7Z6J0 U2.7-201ENST00000619197 100 ntBASIC1.75□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 208.4 ms